Protein–RNA interactions for Protein: Q96PT4

DUX3, Putative double homeobox protein 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX3Q96PT4 uc_338.15-201ENST00000615470 191 ntBASIC2.86□□□□□ -1.95
DUX3Q96PT4 AC126177.8-201ENST00000618339 1015 ntBASIC2.86□□□□□ -1.95
DUX3Q96PT4 AC110801.1-201ENST00000623590 212 ntBASIC2.86□□□□□ -1.95
DUX3Q96PT4 AP003400.5-201ENST00000624827 617 ntBASIC2.86□□□□□ -1.95
DUX3Q96PT4 MTND1P37-201ENST00000636562 264 ntBASIC2.86□□□□□ -1.95
DUX3Q96PT4 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
DUX3Q96PT4 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC2.86□□□□□ -1.95
DUX3Q96PT4 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC2.86□□□□□ -1.95
DUX3Q96PT4 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC2.86□□□□□ -1.95
DUX3Q96PT4 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC2.86□□□□□ -1.95
DUX3Q96PT4 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
DUX3Q96PT4 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
DUX3Q96PT4 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
DUX3Q96PT4 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
DUX3Q96PT4 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
DUX3Q96PT4 MTCO1P12-201ENST00000414273 1543 ntBASIC2.85□□□□□ -1.95
DUX3Q96PT4 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
DUX3Q96PT4 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
DUX3Q96PT4 RNU6-960P-201ENST00000364056 120 ntBASIC2.85□□□□□ -1.95
DUX3Q96PT4 Y_RNA.333-201ENST00000365274 102 ntBASIC2.85□□□□□ -1.95
DUX3Q96PT4 SNORD116-29-201ENST00000384516 83 ntBASIC2.85□□□□□ -1.95
DUX3Q96PT4 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC2.85□□□□□ -1.95
DUX3Q96PT4 AL359634.1-202ENST00000404721 284 ntBASIC2.85□□□□□ -1.95
DUX3Q96PT4 NDUFS5P1-201ENST00000405668 289 ntBASIC2.85□□□□□ -1.95
DUX3Q96PT4 RNU2-29P-201ENST00000410423 189 ntBASIC2.85□□□□□ -1.95
DUX3Q96PT4 TOMM22P1-201ENST00000418578 312 ntBASIC2.85□□□□□ -1.95
DUX3Q96PT4 MTCO3P45-201ENST00000443036 613 ntBASIC2.85□□□□□ -1.95
DUX3Q96PT4 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2.85□□□□□ -1.95
DUX3Q96PT4 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC2.85□□□□□ -1.95
DUX3Q96PT4 MRPS31P2-201ENST00000451581 518 ntBASIC2.85□□□□□ -1.95
DUX3Q96PT4 SCARNA18-201ENST00000459004 134 ntBASIC2.85□□□□□ -1.95
DUX3Q96PT4 AC004801.2-202ENST00000463559 283 ntBASIC2.85□□□□□ -1.95
DUX3Q96PT4 AC084198.1-201ENST00000477747 402 ntBASIC2.85□□□□□ -1.95
DUX3Q96PT4 RPL7P23-201ENST00000493874 747 ntBASIC2.85□□□□□ -1.95
DUX3Q96PT4 AC009901.1-201ENST00000506703 541 ntBASIC2.85□□□□□ -1.95
DUX3Q96PT4 MTND4LP22-201ENST00000508209 276 ntBASIC2.85□□□□□ -1.95
DUX3Q96PT4 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC2.85□□□□□ -1.95
DUX3Q96PT4 SNORA31.22-201ENST00000517204 135 ntBASIC2.85□□□□□ -1.95
DUX3Q96PT4 MTND4P7-201ENST00000523876 130 ntBASIC2.85□□□□□ -1.95
DUX3Q96PT4 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.85□□□□□ -1.95
DUX3Q96PT4 AP006587.4-201ENST00000526053 529 ntBASIC2.85□□□□□ -1.95
DUX3Q96PT4 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
DUX3Q96PT4 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC2.85□□□□□ -1.95
DUX3Q96PT4 MIR3944-201ENST00000581277 108 ntBASIC2.85□□□□□ -1.95
DUX3Q96PT4 ATP1B3P1-201ENST00000605365 821 ntBASIC2.85□□□□□ -1.95
DUX3Q96PT4 U3.45-201ENST00000607547 219 ntBASIC2.85□□□□□ -1.95
DUX3Q96PT4 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC2.85□□□□□ -1.95
DUX3Q96PT4 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
DUX3Q96PT4 AC084757.4-201ENST00000616350 526 ntBASIC2.85□□□□□ -1.95
DUX3Q96PT4 AL353748.2-201ENST00000622148 471 ntBASIC2.85□□□□□ -1.95
DUX3Q96PT4 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
DUX3Q96PT4 AC007823.1-201ENST00000569932 1566 ntBASIC2.85□□□□□ -1.95
DUX3Q96PT4 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
DUX3Q96PT4 MAPK10-362ENST00000641864 4484 ntBASIC2.85□□□□□ -1.95
DUX3Q96PT4 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
DUX3Q96PT4 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
DUX3Q96PT4 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
DUX3Q96PT4 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC2.85□□□□□ -1.95
DUX3Q96PT4 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.95
DUX3Q96PT4 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
DUX3Q96PT4 HSPA8P4-201ENST00000511877 1920 ntBASIC2.84□□□□□ -1.95
DUX3Q96PT4 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.95
DUX3Q96PT4 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.95
DUX3Q96PT4 AC007496.3-201ENST00000624987 3443 ntBASIC2.84□□□□□ -1.95
DUX3Q96PT4 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
DUX3Q96PT4 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
DUX3Q96PT4 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
DUX3Q96PT4 MIR369-201ENST00000362155 70 ntBASIC2.84□□□□□ -1.95
DUX3Q96PT4 Y_RNA.259-201ENST00000364619 101 ntBASIC2.84□□□□□ -1.95
DUX3Q96PT4 Y_RNA.326-201ENST00000365176 113 ntBASIC2.84□□□□□ -1.95
DUX3Q96PT4 RFX3-203ENST00000381984 364 ntTSL 3 BASIC2.84□□□□□ -1.95
DUX3Q96PT4 RNU6-1227P-201ENST00000383981 107 ntBASIC2.84□□□□□ -1.95
DUX3Q96PT4 MIR218-2-201ENST00000385006 110 ntBASIC2.84□□□□□ -1.95
DUX3Q96PT4 HLFP1-201ENST00000402375 499 ntBASIC2.84□□□□□ -1.95
DUX3Q96PT4 AL139397.2-201ENST00000404529 772 ntBASIC2.84□□□□□ -1.95
DUX3Q96PT4 MIR548F5-201ENST00000408421 86 ntBASIC2.84□□□□□ -1.95
DUX3Q96PT4 RNU4-65P-201ENST00000410473 140 ntBASIC2.84□□□□□ -1.95
DUX3Q96PT4 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.84□□□□□ -1.95
DUX3Q96PT4 AC009161.1-201ENST00000417306 376 ntBASIC2.84□□□□□ -1.95
DUX3Q96PT4 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC2.84□□□□□ -1.95
DUX3Q96PT4 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.84□□□□□ -1.95
DUX3Q96PT4 RAC1P6-201ENST00000423911 575 ntBASIC2.84□□□□□ -1.95
DUX3Q96PT4 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC2.84□□□□□ -1.95
DUX3Q96PT4 ATP5HP2-201ENST00000433885 485 ntBASIC2.84□□□□□ -1.95
DUX3Q96PT4 AC073063.1-201ENST00000434352 607 ntBASIC2.84□□□□□ -1.95
DUX3Q96PT4 RPL35AP22-201ENST00000436855 335 ntBASIC2.84□□□□□ -1.95
DUX3Q96PT4 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.84□□□□□ -1.95
DUX3Q96PT4 MTCYBP6-201ENST00000441810 138 ntBASIC2.84□□□□□ -1.95
DUX3Q96PT4 AC106707.2-201ENST00000484182 374 ntBASIC2.84□□□□□ -1.95
DUX3Q96PT4 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
DUX3Q96PT4 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC2.84□□□□□ -1.95
DUX3Q96PT4 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC2.84□□□□□ -1.95
DUX3Q96PT4 AC110768.1-201ENST00000509222 400 ntBASIC2.84□□□□□ -1.95
DUX3Q96PT4 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.84□□□□□ -1.95
DUX3Q96PT4 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC2.84□□□□□ -1.95
DUX3Q96PT4 Y_RNA.691-201ENST00000516611 103 ntBASIC2.84□□□□□ -1.95
DUX3Q96PT4 SNORA70.18-201ENST00000516696 98 ntBASIC2.84□□□□□ -1.95
DUX3Q96PT4 AP000763.2-201ENST00000540641 163 ntBASIC2.84□□□□□ -1.95
DUX3Q96PT4 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC2.84□□□□□ -1.95
DUX3Q96PT4 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms