Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 UBE2D3P1-201ENST00000436669 444 ntBASIC2.07□□□□□ -2.08
COL21A1Q96P44 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
COL21A1Q96P44 HMGB3P12-201ENST00000438745 556 ntBASIC2.07□□□□□ -2.08
COL21A1Q96P44 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC2.07□□□□□ -2.08
COL21A1Q96P44 PGBD4P3-201ENST00000440731 581 ntBASIC2.07□□□□□ -2.08
COL21A1Q96P44 MTND3P1-201ENST00000441336 220 ntBASIC2.07□□□□□ -2.08
COL21A1Q96P44 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC2.07□□□□□ -2.08
COL21A1Q96P44 IFNA11P-201ENST00000446352 526 ntBASIC2.07□□□□□ -2.08
COL21A1Q96P44 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.07□□□□□ -2.08
COL21A1Q96P44 MTATP6P7-201ENST00000453315 681 ntBASIC2.07□□□□□ -2.08
COL21A1Q96P44 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC2.07□□□□□ -2.08
COL21A1Q96P44 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.07□□□□□ -2.08
COL21A1Q96P44 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
COL21A1Q96P44 AHI1-208ENST00000488690 712 ntTSL 5 BASIC2.07□□□□□ -2.08
COL21A1Q96P44 AC098591.2-201ENST00000510152 315 ntBASIC2.07□□□□□ -2.08
COL21A1Q96P44 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC2.07□□□□□ -2.08
COL21A1Q96P44 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.07□□□□□ -2.08
COL21A1Q96P44 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
COL21A1Q96P44 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC2.07□□□□□ -2.08
COL21A1Q96P44 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.07□□□□□ -2.08
COL21A1Q96P44 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
COL21A1Q96P44 AC023824.2-201ENST00000566185 400 ntBASIC2.07□□□□□ -2.08
COL21A1Q96P44 AC136618.2-201ENST00000575091 400 ntBASIC2.07□□□□□ -2.08
COL21A1Q96P44 BNIP3P40-201ENST00000596017 556 ntBASIC2.07□□□□□ -2.08
COL21A1Q96P44 AC245884.10-201ENST00000597355 337 ntBASIC2.07□□□□□ -2.08
COL21A1Q96P44 AC004805.2-201ENST00000605382 482 ntBASIC2.07□□□□□ -2.08
COL21A1Q96P44 DUSP12P1-201ENST00000612874 516 ntBASIC2.07□□□□□ -2.08
COL21A1Q96P44 AC016597.2-201ENST00000613256 341 ntBASIC2.07□□□□□ -2.08
COL21A1Q96P44 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC2.07□□□□□ -2.08
COL21A1Q96P44 MIR7111-201ENST00000619751 72 ntBASIC2.07□□□□□ -2.08
COL21A1Q96P44 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.07□□□□□ -2.08
COL21A1Q96P44 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC2.07□□□□□ -2.08
COL21A1Q96P44 MIR3199-2-201ENST00000636243 86 ntBASIC2.07□□□□□ -2.08
COL21A1Q96P44 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC2.07□□□□□ -2.08
COL21A1Q96P44 MTND5P30-201ENST00000452896 1731 ntBASIC2.07□□□□□ -2.08
COL21A1Q96P44 AC010889.1-201ENST00000566193 2666 ntBASIC2.07□□□□□ -2.08
COL21A1Q96P44 MTND4P27-201ENST00000450813 1354 ntBASIC2.07□□□□□ -2.08
COL21A1Q96P44 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
COL21A1Q96P44 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
COL21A1Q96P44 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
COL21A1Q96P44 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.06□□□□□ -2.08
COL21A1Q96P44 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
COL21A1Q96P44 RNU6-778P-201ENST00000363269 103 ntBASIC2.06□□□□□ -2.08
COL21A1Q96P44 SNORA6-201ENST00000384033 151 ntBASIC2.06□□□□□ -2.08
COL21A1Q96P44 MIR19A-201ENST00000384878 82 ntBASIC2.06□□□□□ -2.08
COL21A1Q96P44 MIR221-201ENST00000385135 110 ntBASIC2.06□□□□□ -2.08
COL21A1Q96P44 MIR524-201ENST00000385242 87 ntBASIC2.06□□□□□ -2.08
COL21A1Q96P44 AL359634.1-202ENST00000404721 284 ntBASIC2.06□□□□□ -2.08
COL21A1Q96P44 RNU2-49P-201ENST00000410666 184 ntBASIC2.06□□□□□ -2.08
COL21A1Q96P44 RNU2-68P-201ENST00000410878 191 ntBASIC2.06□□□□□ -2.08
COL21A1Q96P44 HMGB3P2-201ENST00000411913 584 ntBASIC2.06□□□□□ -2.08
COL21A1Q96P44 ZNF90P2-204ENST00000419323 1075 ntBASIC2.06□□□□□ -2.08
COL21A1Q96P44 HMGN2P38-201ENST00000423806 265 ntBASIC2.06□□□□□ -2.08
COL21A1Q96P44 IPO7P1-201ENST00000442031 636 ntBASIC2.06□□□□□ -2.08
COL21A1Q96P44 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC2.06□□□□□ -2.08
COL21A1Q96P44 FAM103A2P-201ENST00000444122 354 ntBASIC2.06□□□□□ -2.08
COL21A1Q96P44 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
COL21A1Q96P44 AC010631.1-201ENST00000474150 156 ntBASIC2.06□□□□□ -2.08
COL21A1Q96P44 RPS27AP10-201ENST00000496103 208 ntBASIC2.06□□□□□ -2.08
COL21A1Q96P44 AC108210.2-201ENST00000503681 201 ntBASIC2.06□□□□□ -2.08
COL21A1Q96P44 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC2.06□□□□□ -2.08
COL21A1Q96P44 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.06□□□□□ -2.08
COL21A1Q96P44 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC2.06□□□□□ -2.08
COL21A1Q96P44 RNU6-415P-201ENST00000516252 97 ntBASIC2.06□□□□□ -2.08
COL21A1Q96P44 SCARNA1-201ENST00000517138 166 ntBASIC2.06□□□□□ -2.08
COL21A1Q96P44 AC105185.1-201ENST00000518705 535 ntBASIC2.06□□□□□ -2.08
COL21A1Q96P44 BTF3P12-201ENST00000519620 469 ntBASIC2.06□□□□□ -2.08
COL21A1Q96P44 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.06□□□□□ -2.08
COL21A1Q96P44 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC2.06□□□□□ -2.08
COL21A1Q96P44 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC2.06□□□□□ -2.08
COL21A1Q96P44 AC068790.3-201ENST00000602988 553 ntBASIC2.06□□□□□ -2.08
COL21A1Q96P44 AL391813.1-201ENST00000603098 260 ntBASIC2.06□□□□□ -2.08
COL21A1Q96P44 AC105148.1-201ENST00000604961 409 ntBASIC2.06□□□□□ -2.08
COL21A1Q96P44 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
COL21A1Q96P44 MIR6132-201ENST00000622083 109 ntBASIC2.06□□□□□ -2.08
COL21A1Q96P44 AP000553.5-201ENST00000641933 54 ntBASIC2.06□□□□□ -2.08
COL21A1Q96P44 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
COL21A1Q96P44 MTND4P1-201ENST00000457501 1466 ntBASIC2.06□□□□□ -2.08
COL21A1Q96P44 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
COL21A1Q96P44 AP006437.1-201ENST00000641440 3685 ntBASIC2.05□□□□□ -2.08
COL21A1Q96P44 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.05□□□□□ -2.08
COL21A1Q96P44 RNU6-723P-201ENST00000383973 107 ntBASIC2.05□□□□□ -2.08
COL21A1Q96P44 RNU6-1072P-201ENST00000384703 107 ntBASIC2.05□□□□□ -2.08
COL21A1Q96P44 RNU6-443P-201ENST00000384780 107 ntBASIC2.05□□□□□ -2.08
COL21A1Q96P44 RNU6-278P-201ENST00000390945 109 ntBASIC2.05□□□□□ -2.08
COL21A1Q96P44 AL021407.1-201ENST00000404531 386 ntBASIC2.05□□□□□ -2.08
COL21A1Q96P44 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.05□□□□□ -2.08
COL21A1Q96P44 ELOCP9-201ENST00000418624 239 ntBASIC2.05□□□□□ -2.08
COL21A1Q96P44 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.05□□□□□ -2.08
COL21A1Q96P44 BX276092.3-201ENST00000424182 230 ntBASIC2.05□□□□□ -2.08
COL21A1Q96P44 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC2.05□□□□□ -2.08
COL21A1Q96P44 AL356320.1-201ENST00000429616 163 ntBASIC2.05□□□□□ -2.08
COL21A1Q96P44 AL603825.1-201ENST00000438481 80 ntBASIC2.05□□□□□ -2.08
COL21A1Q96P44 AC004854.1-201ENST00000440356 349 ntBASIC2.05□□□□□ -2.08
COL21A1Q96P44 AC005094.1-201ENST00000440420 368 ntBASIC2.05□□□□□ -2.08
COL21A1Q96P44 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.05□□□□□ -2.08
COL21A1Q96P44 AC108059.3-201ENST00000456388 214 ntBASIC2.05□□□□□ -2.08
COL21A1Q96P44 EIF4EP3-201ENST00000498782 656 ntBASIC2.05□□□□□ -2.08
COL21A1Q96P44 AC104090.1-201ENST00000506341 1171 ntBASIC2.05□□□□□ -2.08
COL21A1Q96P44 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 120.6 ms