Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC2.34□□□□□ -2.03
RPRD1AQ96P16 HSFY7P-201ENST00000432672 318 ntBASIC2.34□□□□□ -2.03
RPRD1AQ96P16 HSFY8P-201ENST00000437934 318 ntBASIC2.34□□□□□ -2.03
RPRD1AQ96P16 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC2.34□□□□□ -2.03
RPRD1AQ96P16 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
RPRD1AQ96P16 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.34□□□□□ -2.03
RPRD1AQ96P16 HSFY5P-201ENST00000453726 309 ntBASIC2.34□□□□□ -2.03
RPRD1AQ96P16 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.34□□□□□ -2.03
RPRD1AQ96P16 HSPE1P23-201ENST00000509838 286 ntBASIC2.34□□□□□ -2.03
RPRD1AQ96P16 AC008549.1-201ENST00000512900 643 ntBASIC2.34□□□□□ -2.03
RPRD1AQ96P16 DEFB108A-201ENST00000530110 222 ntBASIC2.34□□□□□ -2.03
RPRD1AQ96P16 AP000907.2-201ENST00000530827 353 ntBASIC2.34□□□□□ -2.03
RPRD1AQ96P16 AP004247.1-201ENST00000531556 1289 ntBASIC2.34□□□□□ -2.03
RPRD1AQ96P16 AC068587.4-201ENST00000533893 186 ntBASIC2.34□□□□□ -2.03
RPRD1AQ96P16 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
RPRD1AQ96P16 AC005261.5-201ENST00000596280 355 ntBASIC2.34□□□□□ -2.03
RPRD1AQ96P16 AL391813.1-201ENST00000603098 260 ntBASIC2.34□□□□□ -2.03
RPRD1AQ96P16 AC008121.1-201ENST00000603244 268 ntBASIC2.34□□□□□ -2.03
RPRD1AQ96P16 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC2.34□□□□□ -2.03
RPRD1AQ96P16 DUSP12P1-201ENST00000612874 516 ntBASIC2.34□□□□□ -2.03
RPRD1AQ96P16 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.34□□□□□ -2.03
RPRD1AQ96P16 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.34□□□□□ -2.03
RPRD1AQ96P16 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC2.34□□□□□ -2.03
RPRD1AQ96P16 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.34□□□□□ -2.03
RPRD1AQ96P16 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.34□□□□□ -2.04
RPRD1AQ96P16 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
RPRD1AQ96P16 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
RPRD1AQ96P16 AC106754.1-201ENST00000562632 1513 ntBASIC2.33□□□□□ -2.04
RPRD1AQ96P16 UBE2L2-201ENST00000254302 429 ntBASIC2.33□□□□□ -2.04
RPRD1AQ96P16 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
RPRD1AQ96P16 RNU6-931P-201ENST00000363850 107 ntBASIC2.33□□□□□ -2.04
RPRD1AQ96P16 RNU5A-8P-201ENST00000364102 114 ntBASIC2.33□□□□□ -2.04
RPRD1AQ96P16 RNA5SP88-201ENST00000365560 109 ntBASIC2.33□□□□□ -2.04
RPRD1AQ96P16 RNU6-1083P-201ENST00000384022 107 ntBASIC2.33□□□□□ -2.04
RPRD1AQ96P16 SNORA3.2-201ENST00000408221 125 ntBASIC2.33□□□□□ -2.04
RPRD1AQ96P16 AL135786.1-201ENST00000415892 214 ntBASIC2.33□□□□□ -2.04
RPRD1AQ96P16 Z98742.3-201ENST00000418637 326 ntBASIC2.33□□□□□ -2.04
RPRD1AQ96P16 MTCO2P21-201ENST00000419780 677 ntBASIC2.33□□□□□ -2.04
RPRD1AQ96P16 ISCA1P1-201ENST00000426679 387 ntBASIC2.33□□□□□ -2.04
RPRD1AQ96P16 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC2.33□□□□□ -2.04
RPRD1AQ96P16 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2.33□□□□□ -2.04
RPRD1AQ96P16 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC2.33□□□□□ -2.04
RPRD1AQ96P16 GPM6BP2-201ENST00000432046 144 ntBASIC2.33□□□□□ -2.04
RPRD1AQ96P16 RPL36AP53-201ENST00000432891 316 ntBASIC2.33□□□□□ -2.04
RPRD1AQ96P16 AC018634.1-201ENST00000437554 401 ntBASIC2.33□□□□□ -2.04
RPRD1AQ96P16 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC2.33□□□□□ -2.04
RPRD1AQ96P16 IPO7P1-201ENST00000442031 636 ntBASIC2.33□□□□□ -2.04
RPRD1AQ96P16 GPM6BP1-201ENST00000446387 144 ntBASIC2.33□□□□□ -2.04
RPRD1AQ96P16 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC2.33□□□□□ -2.04
RPRD1AQ96P16 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC2.33□□□□□ -2.04
RPRD1AQ96P16 RPF2P2-201ENST00000504693 896 ntBASIC2.33□□□□□ -2.04
RPRD1AQ96P16 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.33□□□□□ -2.04
RPRD1AQ96P16 SNORA31.3-201ENST00000516029 96 ntBASIC2.33□□□□□ -2.04
RPRD1AQ96P16 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.33□□□□□ -2.04
RPRD1AQ96P16 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.33□□□□□ -2.04
RPRD1AQ96P16 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC2.33□□□□□ -2.04
RPRD1AQ96P16 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC2.33□□□□□ -2.04
RPRD1AQ96P16 AC135628.1-201ENST00000568867 534 ntBASIC2.33□□□□□ -2.04
RPRD1AQ96P16 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC2.33□□□□□ -2.04
RPRD1AQ96P16 AC091965.4-201ENST00000607691 587 ntBASIC2.33□□□□□ -2.04
RPRD1AQ96P16 AC103710.1-201ENST00000610003 901 ntBASIC2.33□□□□□ -2.04
RPRD1AQ96P16 AC005332.10-201ENST00000612725 619 ntBASIC2.33□□□□□ -2.04
RPRD1AQ96P16 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC2.33□□□□□ -2.04
RPRD1AQ96P16 MIR3199-2-201ENST00000636243 86 ntBASIC2.33□□□□□ -2.04
RPRD1AQ96P16 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.33□□□□□ -2.04
RPRD1AQ96P16 MTND4P27-201ENST00000450813 1354 ntBASIC2.33□□□□□ -2.04
RPRD1AQ96P16 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.33□□□□□ -2.04
RPRD1AQ96P16 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
RPRD1AQ96P16 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.32□□□□□ -2.04
RPRD1AQ96P16 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC2.32□□□□□ -2.04
RPRD1AQ96P16 OR5H15-201ENST00000383696 930 ntBASIC2.32□□□□□ -2.04
RPRD1AQ96P16 MIR221-201ENST00000385135 110 ntBASIC2.32□□□□□ -2.04
RPRD1AQ96P16 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.32□□□□□ -2.04
RPRD1AQ96P16 AC078974.1-201ENST00000411597 223 ntBASIC2.32□□□□□ -2.04
RPRD1AQ96P16 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC2.32□□□□□ -2.04
RPRD1AQ96P16 AL109913.1-201ENST00000421173 514 ntBASIC2.32□□□□□ -2.04
RPRD1AQ96P16 AL353729.1-201ENST00000425044 720 ntBASIC2.32□□□□□ -2.04
RPRD1AQ96P16 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC2.32□□□□□ -2.04
RPRD1AQ96P16 AC007560.1-201ENST00000426912 237 ntBASIC2.32□□□□□ -2.04
RPRD1AQ96P16 AL356320.1-201ENST00000429616 163 ntBASIC2.32□□□□□ -2.04
RPRD1AQ96P16 MTND1P32-201ENST00000433043 938 ntBASIC2.32□□□□□ -2.04
RPRD1AQ96P16 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC2.32□□□□□ -2.04
RPRD1AQ96P16 RPL32P28-201ENST00000443577 397 ntBASIC2.32□□□□□ -2.04
RPRD1AQ96P16 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.32□□□□□ -2.04
RPRD1AQ96P16 HMGN2P10-201ENST00000448085 265 ntBASIC2.32□□□□□ -2.04
RPRD1AQ96P16 TRBV12-1-201ENST00000479785 344 ntBASIC2.32□□□□□ -2.04
RPRD1AQ96P16 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
RPRD1AQ96P16 AC104685.1-201ENST00000502445 371 ntBASIC2.32□□□□□ -2.04
RPRD1AQ96P16 ANXA2P1-201ENST00000505539 926 ntBASIC2.32□□□□□ -2.04
RPRD1AQ96P16 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.32□□□□□ -2.04
RPRD1AQ96P16 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC2.32□□□□□ -2.04
RPRD1AQ96P16 NACAP3-201ENST00000552100 481 ntBASIC2.32□□□□□ -2.04
RPRD1AQ96P16 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC2.32□□□□□ -2.04
RPRD1AQ96P16 MTND4P33-201ENST00000556706 766 ntBASIC2.32□□□□□ -2.04
RPRD1AQ96P16 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC2.32□□□□□ -2.04
RPRD1AQ96P16 AC021739.1-201ENST00000559631 174 ntBASIC2.32□□□□□ -2.04
RPRD1AQ96P16 MTND1P8-201ENST00000571424 950 ntBASIC2.32□□□□□ -2.04
RPRD1AQ96P16 AC007151.1-201ENST00000572774 483 ntBASIC2.32□□□□□ -2.04
RPRD1AQ96P16 RPS3AP23-202ENST00000574601 686 ntBASIC2.32□□□□□ -2.04
RPRD1AQ96P16 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms