Protein–RNA interactions for Protein: Q96KR7

PHACTR3, Phosphatase and actin regulator 3, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR3Q96KR7 RNY3P1-201ENST00000365085 102 ntBASIC4.11□□□□□ -1.75
PHACTR3Q96KR7 RNY3-201ENST00000365484 102 ntBASIC4.11□□□□□ -1.75
PHACTR3Q96KR7 RNU6-61P-201ENST00000365528 109 ntBASIC4.11□□□□□ -1.75
PHACTR3Q96KR7 RNU6-637P-201ENST00000384050 107 ntBASIC4.11□□□□□ -1.75
PHACTR3Q96KR7 Y_RNA.490-201ENST00000384413 102 ntBASIC4.11□□□□□ -1.75
PHACTR3Q96KR7 AL109755.1-201ENST00000401791 649 ntBASIC4.11□□□□□ -1.75
PHACTR3Q96KR7 RN7SKP220-201ENST00000410611 288 ntBASIC4.11□□□□□ -1.75
PHACTR3Q96KR7 SAR1AP4-201ENST00000429225 591 ntBASIC4.11□□□□□ -1.75
PHACTR3Q96KR7 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC4.11□□□□□ -1.75
PHACTR3Q96KR7 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC4.11□□□□□ -1.75
PHACTR3Q96KR7 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC4.11□□□□□ -1.75
PHACTR3Q96KR7 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC4.11□□□□□ -1.75
PHACTR3Q96KR7 RPL27AP5-201ENST00000469428 449 ntBASIC4.11□□□□□ -1.75
PHACTR3Q96KR7 AC098591.2-201ENST00000510152 315 ntBASIC4.11□□□□□ -1.75
PHACTR3Q96KR7 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
PHACTR3Q96KR7 AC022690.1-201ENST00000526681 550 ntBASIC4.11□□□□□ -1.75
PHACTR3Q96KR7 AL118558.2-201ENST00000556294 238 ntBASIC4.11□□□□□ -1.75
PHACTR3Q96KR7 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC4.11□□□□□ -1.75
PHACTR3Q96KR7 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.11□□□□□ -1.75
PHACTR3Q96KR7 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC4.11□□□□□ -1.75
PHACTR3Q96KR7 uc_338.11-201ENST00000619132 160 ntBASIC4.11□□□□□ -1.75
PHACTR3Q96KR7 AC006065.5-201ENST00000623427 349 ntBASIC4.11□□□□□ -1.75
PHACTR3Q96KR7 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC4.11□□□□□ -1.75
PHACTR3Q96KR7 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
PHACTR3Q96KR7 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
PHACTR3Q96KR7 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC4.11□□□□□ -1.75
PHACTR3Q96KR7 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC4.11□□□□□ -1.75
PHACTR3Q96KR7 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.11□□□□□ -1.75
PHACTR3Q96KR7 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
PHACTR3Q96KR7 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
PHACTR3Q96KR7 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
PHACTR3Q96KR7 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
PHACTR3Q96KR7 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC4.1□□□□□ -1.75
PHACTR3Q96KR7 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
PHACTR3Q96KR7 AC073343.1-201ENST00000328239 651 ntBASIC4.1□□□□□ -1.75
PHACTR3Q96KR7 Y_RNA.100-201ENST00000363141 102 ntBASIC4.1□□□□□ -1.75
PHACTR3Q96KR7 SNORD115-7-201ENST00000365306 82 ntBASIC4.1□□□□□ -1.75
PHACTR3Q96KR7 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC4.1□□□□□ -1.75
PHACTR3Q96KR7 SNORA44-201ENST00000384584 132 ntBASIC4.1□□□□□ -1.75
PHACTR3Q96KR7 AC114491.1-201ENST00000416095 246 ntBASIC4.1□□□□□ -1.75
PHACTR3Q96KR7 AC009161.1-201ENST00000417306 376 ntBASIC4.1□□□□□ -1.75
PHACTR3Q96KR7 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC4.1□□□□□ -1.75
PHACTR3Q96KR7 NCOR1P3-201ENST00000420479 303 ntBASIC4.1□□□□□ -1.75
PHACTR3Q96KR7 AL645939.1-201ENST00000453429 797 ntBASIC4.1□□□□□ -1.75
PHACTR3Q96KR7 AC007547.1-201ENST00000462177 490 ntBASIC4.1□□□□□ -1.75
PHACTR3Q96KR7 TAF8-207ENST00000482432 556 ntTSL 2 BASIC4.1□□□□□ -1.75
PHACTR3Q96KR7 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC4.1□□□□□ -1.75
PHACTR3Q96KR7 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.1□□□□□ -1.75
PHACTR3Q96KR7 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC4.1□□□□□ -1.75
PHACTR3Q96KR7 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC4.1□□□□□ -1.75
PHACTR3Q96KR7 RN7SKP256-201ENST00000517201 314 ntBASIC4.1□□□□□ -1.75
PHACTR3Q96KR7 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC4.1□□□□□ -1.75
PHACTR3Q96KR7 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC4.1□□□□□ -1.75
PHACTR3Q96KR7 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC4.1□□□□□ -1.75
PHACTR3Q96KR7 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC4.1□□□□□ -1.75
PHACTR3Q96KR7 AC006254.3-201ENST00000603353 884 ntBASIC4.1□□□□□ -1.75
PHACTR3Q96KR7 U73479.1-201ENST00000618062 168 ntBASIC4.1□□□□□ -1.75
PHACTR3Q96KR7 MIR6130-201ENST00000619419 109 ntBASIC4.1□□□□□ -1.75
PHACTR3Q96KR7 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC4.1□□□□□ -1.75
PHACTR3Q96KR7 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC4.1□□□□□ -1.75
PHACTR3Q96KR7 MIR1302-1-201ENST00000637932 143 ntBASIC4.1□□□□□ -1.75
PHACTR3Q96KR7 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
PHACTR3Q96KR7 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
PHACTR3Q96KR7 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
PHACTR3Q96KR7 AC008725.1-201ENST00000605123 2263 ntBASIC4.1□□□□□ -1.75
PHACTR3Q96KR7 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
PHACTR3Q96KR7 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
PHACTR3Q96KR7 ZNF807-201ENST00000328088 1707 ntBASIC4.09□□□□□ -1.75
PHACTR3Q96KR7 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
PHACTR3Q96KR7 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
PHACTR3Q96KR7 RNU6-188P-201ENST00000364207 107 ntBASIC4.09□□□□□ -1.75
PHACTR3Q96KR7 Y_RNA.301-201ENST00000364990 103 ntBASIC4.09□□□□□ -1.75
PHACTR3Q96KR7 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
PHACTR3Q96KR7 RNU6-432P-201ENST00000384196 109 ntBASIC4.09□□□□□ -1.75
PHACTR3Q96KR7 SNORA24.1-201ENST00000384401 135 ntBASIC4.09□□□□□ -1.75
PHACTR3Q96KR7 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC4.09□□□□□ -1.75
PHACTR3Q96KR7 RN7SKP140-201ENST00000411196 284 ntBASIC4.09□□□□□ -1.75
PHACTR3Q96KR7 AC096664.2-201ENST00000411843 406 ntBASIC4.09□□□□□ -1.75
PHACTR3Q96KR7 RHEBP3-201ENST00000411920 351 ntBASIC4.09□□□□□ -1.75
PHACTR3Q96KR7 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC4.09□□□□□ -1.75
PHACTR3Q96KR7 HSPE1P1-201ENST00000421494 318 ntBASIC4.09□□□□□ -1.75
PHACTR3Q96KR7 AC024082.2-201ENST00000434771 238 ntBASIC4.09□□□□□ -1.75
PHACTR3Q96KR7 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.09□□□□□ -1.75
PHACTR3Q96KR7 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC4.09□□□□□ -1.75
PHACTR3Q96KR7 HMGB1P18-201ENST00000438801 619 ntBASIC4.09□□□□□ -1.75
PHACTR3Q96KR7 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
PHACTR3Q96KR7 AL590639.1-201ENST00000456484 337 ntBASIC4.09□□□□□ -1.75
PHACTR3Q96KR7 AL162395.1-201ENST00000457882 422 ntBASIC4.09□□□□□ -1.75
PHACTR3Q96KR7 SNORD97-201ENST00000459187 142 ntBASIC4.09□□□□□ -1.75
PHACTR3Q96KR7 RPS27AP1-201ENST00000475545 471 ntBASIC4.09□□□□□ -1.75
PHACTR3Q96KR7 AP000926.1-201ENST00000479573 241 ntBASIC4.09□□□□□ -1.75
PHACTR3Q96KR7 RPL21P99-201ENST00000480369 423 ntBASIC4.09□□□□□ -1.75
PHACTR3Q96KR7 CCDC34P1-201ENST00000507441 517 ntBASIC4.09□□□□□ -1.75
PHACTR3Q96KR7 GMPSP1-201ENST00000514075 579 ntBASIC4.09□□□□□ -1.75
PHACTR3Q96KR7 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC4.09□□□□□ -1.75
PHACTR3Q96KR7 RNU6-1092P-201ENST00000516955 87 ntBASIC4.09□□□□□ -1.75
PHACTR3Q96KR7 RN7SKP60-201ENST00000516985 239 ntBASIC4.09□□□□□ -1.75
PHACTR3Q96KR7 AC104027.1-201ENST00000521887 300 ntBASIC4.09□□□□□ -1.75
PHACTR3Q96KR7 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC4.09□□□□□ -1.75
PHACTR3Q96KR7 AL442663.2-201ENST00000554385 511 ntBASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 147 ms