Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 HMGB1P22-201ENST00000505315 124 ntBASIC3.24□□□□□ -1.89
RTP4Q96DX8 AC116562.3-201ENST00000506136 177 ntBASIC3.24□□□□□ -1.89
RTP4Q96DX8 RNU4ATAC8P-201ENST00000516196 109 ntBASIC3.24□□□□□ -1.89
RTP4Q96DX8 RNU7-51P-201ENST00000516560 62 ntBASIC3.24□□□□□ -1.89
RTP4Q96DX8 RNU6-1153P-201ENST00000516760 105 ntBASIC3.24□□□□□ -1.89
RTP4Q96DX8 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC3.24□□□□□ -1.89
RTP4Q96DX8 AC068587.5-201ENST00000528506 175 ntBASIC3.24□□□□□ -1.89
RTP4Q96DX8 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.24□□□□□ -1.89
RTP4Q96DX8 OR5AL2P-201ENST00000532185 920 ntBASIC3.24□□□□□ -1.89
RTP4Q96DX8 CBX3P7-201ENST00000532876 502 ntBASIC3.24□□□□□ -1.89
RTP4Q96DX8 AC135001.1-201ENST00000544546 283 ntBASIC3.24□□□□□ -1.89
RTP4Q96DX8 AC125611.2-201ENST00000551907 647 ntBASIC3.24□□□□□ -1.89
RTP4Q96DX8 SCOCP1-201ENST00000554676 349 ntBASIC3.24□□□□□ -1.89
RTP4Q96DX8 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.24□□□□□ -1.89
RTP4Q96DX8 AC106782.4-201ENST00000568264 210 ntBASIC3.24□□□□□ -1.89
RTP4Q96DX8 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.24□□□□□ -1.89
RTP4Q96DX8 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.24□□□□□ -1.89
RTP4Q96DX8 AC021646.1-201ENST00000605469 484 ntBASIC3.24□□□□□ -1.89
RTP4Q96DX8 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC3.24□□□□□ -1.89
RTP4Q96DX8 AC093838.1-201ENST00000613014 469 ntBASIC3.24□□□□□ -1.89
RTP4Q96DX8 AC092628.2-201ENST00000622492 339 ntBASIC3.24□□□□□ -1.89
RTP4Q96DX8 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.24□□□□□ -1.89
RTP4Q96DX8 AC093908.1-201ENST00000623125 8092 ntBASIC3.24□□□□□ -1.89
RTP4Q96DX8 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
RTP4Q96DX8 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
RTP4Q96DX8 MTCO1P9-201ENST00000505577 1534 ntBASIC3.24□□□□□ -1.89
RTP4Q96DX8 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.24□□□□□ -1.89
RTP4Q96DX8 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.24□□□□□ -1.89
RTP4Q96DX8 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
RTP4Q96DX8 RNU6-552P-201ENST00000362869 119 ntBASIC3.23□□□□□ -1.89
RTP4Q96DX8 SNORA32.2-201ENST00000384049 122 ntBASIC3.23□□□□□ -1.89
RTP4Q96DX8 RNU6-1029P-201ENST00000384109 107 ntBASIC3.23□□□□□ -1.89
RTP4Q96DX8 SNORA48.5-201ENST00000391143 135 ntBASIC3.23□□□□□ -1.89
RTP4Q96DX8 RNU6-903P-201ENST00000391270 109 ntBASIC3.23□□□□□ -1.89
RTP4Q96DX8 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
RTP4Q96DX8 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC3.23□□□□□ -1.89
RTP4Q96DX8 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.23□□□□□ -1.89
RTP4Q96DX8 DUTP6-201ENST00000425573 462 ntBASIC3.23□□□□□ -1.89
RTP4Q96DX8 AC008850.1-201ENST00000427546 362 ntBASIC3.23□□□□□ -1.89
RTP4Q96DX8 AC006028.1-201ENST00000438379 402 ntBASIC3.23□□□□□ -1.89
RTP4Q96DX8 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.23□□□□□ -1.89
RTP4Q96DX8 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC3.23□□□□□ -1.89
RTP4Q96DX8 HMGN2P26-201ENST00000463169 339 ntBASIC3.23□□□□□ -1.89
RTP4Q96DX8 RN7SL504P-201ENST00000494496 287 ntBASIC3.23□□□□□ -1.89
RTP4Q96DX8 AC023141.12-201ENST00000512399 199 ntBASIC3.23□□□□□ -1.89
RTP4Q96DX8 RNU6-1095P-201ENST00000516148 108 ntBASIC3.23□□□□□ -1.89
RTP4Q96DX8 RNU2-10P-201ENST00000516375 211 ntBASIC3.23□□□□□ -1.89
RTP4Q96DX8 BTF3P12-201ENST00000519620 469 ntBASIC3.23□□□□□ -1.89
RTP4Q96DX8 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC3.23□□□□□ -1.89
RTP4Q96DX8 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC3.23□□□□□ -1.89
RTP4Q96DX8 HPRT1P3-201ENST00000539521 576 ntBASIC3.23□□□□□ -1.89
RTP4Q96DX8 AC243972.3-201ENST00000539655 198 ntBASIC3.23□□□□□ -1.89
RTP4Q96DX8 AC093027.1-201ENST00000546698 429 ntBASIC3.23□□□□□ -1.89
RTP4Q96DX8 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.23□□□□□ -1.89
RTP4Q96DX8 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.23□□□□□ -1.89
RTP4Q96DX8 MIR5583-1-201ENST00000580941 59 ntBASIC3.23□□□□□ -1.89
RTP4Q96DX8 MIR4795-201ENST00000584182 89 ntBASIC3.23□□□□□ -1.89
RTP4Q96DX8 RNU6-89P-201ENST00000606519 100 ntBASIC3.23□□□□□ -1.89
RTP4Q96DX8 AC009233.1-201ENST00000616477 371 ntBASIC3.23□□□□□ -1.89
RTP4Q96DX8 AC009248.2-201ENST00000619826 254 ntBASIC3.23□□□□□ -1.89
RTP4Q96DX8 AC011155.2-201ENST00000623202 216 ntBASIC3.23□□□□□ -1.89
RTP4Q96DX8 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
RTP4Q96DX8 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.23□□□□□ -1.89
RTP4Q96DX8 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
RTP4Q96DX8 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
RTP4Q96DX8 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.23□□□□□ -1.89
RTP4Q96DX8 MTND4P35-201ENST00000604257 1375 ntBASIC3.23□□□□□ -1.89
RTP4Q96DX8 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
RTP4Q96DX8 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.23□□□□□ -1.89
RTP4Q96DX8 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
RTP4Q96DX8 XIAPP3-201ENST00000312918 795 ntBASIC3.22□□□□□ -1.89
RTP4Q96DX8 Y_RNA.111-201ENST00000363248 100 ntBASIC3.22□□□□□ -1.89
RTP4Q96DX8 RNU6-1155P-201ENST00000363554 107 ntBASIC3.22□□□□□ -1.89
RTP4Q96DX8 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
RTP4Q96DX8 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.22□□□□□ -1.89
RTP4Q96DX8 RNU6-38P-201ENST00000384085 107 ntBASIC3.22□□□□□ -1.89
RTP4Q96DX8 SNORA24.1-201ENST00000384401 135 ntBASIC3.22□□□□□ -1.89
RTP4Q96DX8 MIR514A2-201ENST00000385131 88 ntBASIC3.22□□□□□ -1.89
RTP4Q96DX8 MIR514A3-201ENST00000385132 88 ntBASIC3.22□□□□□ -1.89
RTP4Q96DX8 AL109755.1-201ENST00000401791 649 ntBASIC3.22□□□□□ -1.89
RTP4Q96DX8 RPL21P24-201ENST00000413752 448 ntBASIC3.22□□□□□ -1.89
RTP4Q96DX8 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.22□□□□□ -1.89
RTP4Q96DX8 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC3.22□□□□□ -1.89
RTP4Q96DX8 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.22□□□□□ -1.89
RTP4Q96DX8 MRPL50P4-201ENST00000446432 475 ntBASIC3.22□□□□□ -1.89
RTP4Q96DX8 Z75741.1-201ENST00000446793 314 ntBASIC3.22□□□□□ -1.89
RTP4Q96DX8 UQCRHP3-201ENST00000451503 251 ntBASIC3.22□□□□□ -1.89
RTP4Q96DX8 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC3.22□□□□□ -1.89
RTP4Q96DX8 RNU6-333P-201ENST00000459117 107 ntBASIC3.22□□□□□ -1.89
RTP4Q96DX8 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.22□□□□□ -1.89
RTP4Q96DX8 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.22□□□□□ -1.89
RTP4Q96DX8 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
RTP4Q96DX8 RPL38P4-201ENST00000502376 214 ntBASIC3.22□□□□□ -1.89
RTP4Q96DX8 AC110794.1-201ENST00000505816 425 ntBASIC3.22□□□□□ -1.89
RTP4Q96DX8 AC005921.1-201ENST00000510589 286 ntBASIC3.22□□□□□ -1.89
RTP4Q96DX8 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.22□□□□□ -1.89
RTP4Q96DX8 TTC39CP1-201ENST00000512513 755 ntBASIC3.22□□□□□ -1.89
RTP4Q96DX8 RNU6-1038P-201ENST00000516516 104 ntBASIC3.22□□□□□ -1.89
RTP4Q96DX8 SNORA31.20-201ENST00000517111 133 ntBASIC3.22□□□□□ -1.89
RTP4Q96DX8 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 123.7 ms