Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CTHRC1Q96CG8 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CTHRC1Q96CG8 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CTHRC1Q96CG8 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.46□□□□□ -1.86
CTHRC1Q96CG8 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CTHRC1Q96CG8 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.46□□□□□ -1.86
CTHRC1Q96CG8 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CTHRC1Q96CG8 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CTHRC1Q96CG8 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CTHRC1Q96CG8 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CTHRC1Q96CG8 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.45□□□□□ -1.86
CTHRC1Q96CG8 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.45□□□□□ -1.86
CTHRC1Q96CG8 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CTHRC1Q96CG8 Y_RNA.58-201ENST00000362807 102 ntBASIC3.45□□□□□ -1.86
CTHRC1Q96CG8 Y_RNA.154-201ENST00000363624 102 ntBASIC3.45□□□□□ -1.86
CTHRC1Q96CG8 RNY3P1-201ENST00000365085 102 ntBASIC3.45□□□□□ -1.86
CTHRC1Q96CG8 SNORD6-201ENST00000365444 73 ntBASIC3.45□□□□□ -1.86
CTHRC1Q96CG8 RNY3-201ENST00000365484 102 ntBASIC3.45□□□□□ -1.86
CTHRC1Q96CG8 RNU6-741P-201ENST00000383889 107 ntBASIC3.45□□□□□ -1.86
CTHRC1Q96CG8 Y_RNA.490-201ENST00000384413 102 ntBASIC3.45□□□□□ -1.86
CTHRC1Q96CG8 SNORA48.7-201ENST00000391302 135 ntBASIC3.45□□□□□ -1.86
CTHRC1Q96CG8 Z98941.1-201ENST00000407764 100 ntBASIC3.45□□□□□ -1.86
CTHRC1Q96CG8 SNORA57.3-201ENST00000411095 141 ntBASIC3.45□□□□□ -1.86
CTHRC1Q96CG8 AC074085.1-201ENST00000413598 418 ntBASIC3.45□□□□□ -1.86
CTHRC1Q96CG8 VN1R36P-201ENST00000414936 291 ntBASIC3.45□□□□□ -1.86
CTHRC1Q96CG8 CRYBB2P1-203ENST00000415709 538 ntBASIC3.45□□□□□ -1.86
CTHRC1Q96CG8 GPM6BP2-201ENST00000432046 144 ntBASIC3.45□□□□□ -1.86
CTHRC1Q96CG8 NDUFB1P1-201ENST00000435191 180 ntBASIC3.45□□□□□ -1.86
CTHRC1Q96CG8 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
CTHRC1Q96CG8 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.45□□□□□ -1.86
CTHRC1Q96CG8 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC3.45□□□□□ -1.86
CTHRC1Q96CG8 AC009237.8-201ENST00000445492 379 ntBASIC3.45□□□□□ -1.86
CTHRC1Q96CG8 GPM6BP1-201ENST00000446387 144 ntBASIC3.45□□□□□ -1.86
CTHRC1Q96CG8 AL133547.1-201ENST00000448546 220 ntBASIC3.45□□□□□ -1.86
CTHRC1Q96CG8 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC3.45□□□□□ -1.86
CTHRC1Q96CG8 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC3.45□□□□□ -1.86
CTHRC1Q96CG8 RNU6-566P-201ENST00000516790 107 ntBASIC3.45□□□□□ -1.86
CTHRC1Q96CG8 RNA5SP290-201ENST00000517133 127 ntBASIC3.45□□□□□ -1.86
CTHRC1Q96CG8 RNU6-1315P-201ENST00000517187 99 ntBASIC3.45□□□□□ -1.86
CTHRC1Q96CG8 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC3.45□□□□□ -1.86
CTHRC1Q96CG8 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC3.45□□□□□ -1.86
CTHRC1Q96CG8 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.45□□□□□ -1.86
CTHRC1Q96CG8 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.45□□□□□ -1.86
CTHRC1Q96CG8 AC004024.1-201ENST00000549244 247 ntBASIC3.45□□□□□ -1.86
CTHRC1Q96CG8 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC3.45□□□□□ -1.86
CTHRC1Q96CG8 MIR3690-201ENST00000580266 75 ntBASIC3.45□□□□□ -1.86
CTHRC1Q96CG8 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.45□□□□□ -1.86
CTHRC1Q96CG8 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.45□□□□□ -1.86
CTHRC1Q96CG8 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.45□□□□□ -1.86
CTHRC1Q96CG8 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.45□□□□□ -1.86
CTHRC1Q96CG8 AL121772.2-201ENST00000614331 297 ntBASIC3.45□□□□□ -1.86
CTHRC1Q96CG8 AC090132.2-201ENST00000615881 347 ntBASIC3.45□□□□□ -1.86
CTHRC1Q96CG8 AC006133.1-201ENST00000617106 264 ntBASIC3.45□□□□□ -1.86
CTHRC1Q96CG8 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
CTHRC1Q96CG8 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.45□□□□□ -1.86
CTHRC1Q96CG8 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.45□□□□□ -1.86
CTHRC1Q96CG8 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CTHRC1Q96CG8 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
CTHRC1Q96CG8 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CTHRC1Q96CG8 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.44□□□□□ -1.86
CTHRC1Q96CG8 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
CTHRC1Q96CG8 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
CTHRC1Q96CG8 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.44□□□□□ -1.86
CTHRC1Q96CG8 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CTHRC1Q96CG8 RNA5SP124-201ENST00000362739 110 ntBASIC3.44□□□□□ -1.86
CTHRC1Q96CG8 Y_RNA.212-201ENST00000364177 102 ntBASIC3.44□□□□□ -1.86
CTHRC1Q96CG8 MTHFD2P2-201ENST00000407725 247 ntBASIC3.44□□□□□ -1.86
CTHRC1Q96CG8 RHEBP3-201ENST00000411920 351 ntBASIC3.44□□□□□ -1.86
CTHRC1Q96CG8 Z85995.1-201ENST00000415547 335 ntBASIC3.44□□□□□ -1.86
CTHRC1Q96CG8 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC3.44□□□□□ -1.86
CTHRC1Q96CG8 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.44□□□□□ -1.86
CTHRC1Q96CG8 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3.44□□□□□ -1.86
CTHRC1Q96CG8 SAR1AP4-201ENST00000429225 591 ntBASIC3.44□□□□□ -1.86
CTHRC1Q96CG8 AC018644.1-201ENST00000429934 551 ntBASIC3.44□□□□□ -1.86
CTHRC1Q96CG8 AC005019.1-201ENST00000436455 431 ntBASIC3.44□□□□□ -1.86
CTHRC1Q96CG8 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC3.44□□□□□ -1.86
CTHRC1Q96CG8 RNU7-170P-201ENST00000459303 61 ntBASIC3.44□□□□□ -1.86
CTHRC1Q96CG8 RPL7P5-201ENST00000471472 736 ntBASIC3.44□□□□□ -1.86
CTHRC1Q96CG8 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.44□□□□□ -1.86
CTHRC1Q96CG8 RNU6-1069P-201ENST00000516612 133 ntBASIC3.44□□□□□ -1.86
CTHRC1Q96CG8 RNU6-1088P-201ENST00000516850 104 ntBASIC3.44□□□□□ -1.86
CTHRC1Q96CG8 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.44□□□□□ -1.86
CTHRC1Q96CG8 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.44□□□□□ -1.86
CTHRC1Q96CG8 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.44□□□□□ -1.86
CTHRC1Q96CG8 AC007151.1-201ENST00000572774 483 ntBASIC3.44□□□□□ -1.86
CTHRC1Q96CG8 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC3.44□□□□□ -1.86
CTHRC1Q96CG8 MIR3672-201ENST00000584290 82 ntBASIC3.44□□□□□ -1.86
CTHRC1Q96CG8 AC135507.2-201ENST00000612443 309 ntBASIC3.44□□□□□ -1.86
CTHRC1Q96CG8 SNORD39.4-201ENST00000620099 78 ntBASIC3.44□□□□□ -1.86
CTHRC1Q96CG8 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC3.44□□□□□ -1.86
CTHRC1Q96CG8 AC244205.2-202ENST00000635781 342 ntBASIC3.44□□□□□ -1.86
CTHRC1Q96CG8 AC012442.3-202ENST00000636742 206 ntBASIC3.44□□□□□ -1.86
CTHRC1Q96CG8 AP000553.6-201ENST00000641242 118 ntBASIC3.44□□□□□ -1.86
CTHRC1Q96CG8 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CTHRC1Q96CG8 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
CTHRC1Q96CG8 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CTHRC1Q96CG8 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CTHRC1Q96CG8 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.44□□□□□ -1.86
CTHRC1Q96CG8 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
CTHRC1Q96CG8 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms