Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 AC006504.8-201ENST00000621046 635 ntBASIC3.91□□□□□ -1.78
HPS3Q969F9 AP003122.6-201ENST00000623831 495 ntBASIC3.91□□□□□ -1.78
HPS3Q969F9 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
HPS3Q969F9 AL049641.1-201ENST00000441055 1948 ntBASIC3.91□□□□□ -1.78
HPS3Q969F9 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
HPS3Q969F9 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
HPS3Q969F9 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
HPS3Q969F9 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.9□□□□□ -1.78
HPS3Q969F9 ZNF807-201ENST00000328088 1707 ntBASIC3.9□□□□□ -1.78
HPS3Q969F9 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
HPS3Q969F9 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.9□□□□□ -1.78
HPS3Q969F9 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
HPS3Q969F9 RNU6-38P-201ENST00000384085 107 ntBASIC3.9□□□□□ -1.79
HPS3Q969F9 RNY3P14-201ENST00000384309 102 ntBASIC3.9□□□□□ -1.79
HPS3Q969F9 AL139039.1-201ENST00000401900 692 ntBASIC3.9□□□□□ -1.79
HPS3Q969F9 AL356776.1-201ENST00000406574 447 ntBASIC3.9□□□□□ -1.79
HPS3Q969F9 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.9□□□□□ -1.79
HPS3Q969F9 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC3.9□□□□□ -1.79
HPS3Q969F9 AC009161.1-201ENST00000417306 376 ntBASIC3.9□□□□□ -1.79
HPS3Q969F9 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC3.9□□□□□ -1.79
HPS3Q969F9 SRIP2-201ENST00000428470 166 ntBASIC3.9□□□□□ -1.79
HPS3Q969F9 SCARNA18-201ENST00000459004 134 ntBASIC3.9□□□□□ -1.79
HPS3Q969F9 RNU6-333P-201ENST00000459117 107 ntBASIC3.9□□□□□ -1.79
HPS3Q969F9 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.9□□□□□ -1.79
HPS3Q969F9 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC3.9□□□□□ -1.79
HPS3Q969F9 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.9□□□□□ -1.79
HPS3Q969F9 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.9□□□□□ -1.79
HPS3Q969F9 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.9□□□□□ -1.79
HPS3Q969F9 AL121579.1-201ENST00000555129 305 ntBASIC3.9□□□□□ -1.79
HPS3Q969F9 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.9□□□□□ -1.79
HPS3Q969F9 MIR5692A1-201ENST00000580523 69 ntBASIC3.9□□□□□ -1.79
HPS3Q969F9 MIR4424-201ENST00000585257 86 ntBASIC3.9□□□□□ -1.79
HPS3Q969F9 AC022149.2-201ENST00000621061 203 ntBASIC3.9□□□□□ -1.79
HPS3Q969F9 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.9□□□□□ -1.79
HPS3Q969F9 AC002546.1-201ENST00000588041 2504 ntBASIC3.9□□□□□ -1.79
HPS3Q969F9 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.89□□□□□ -1.79
HPS3Q969F9 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.89□□□□□ -1.79
HPS3Q969F9 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.89□□□□□ -1.79
HPS3Q969F9 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.89□□□□□ -1.79
HPS3Q969F9 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.89□□□□□ -1.79
HPS3Q969F9 RNU6-332P-201ENST00000391193 108 ntBASIC3.89□□□□□ -1.79
HPS3Q969F9 AP000567.1-201ENST00000406413 156 ntBASIC3.89□□□□□ -1.79
HPS3Q969F9 RNU4-26P-201ENST00000410270 107 ntBASIC3.89□□□□□ -1.79
HPS3Q969F9 AC022028.1-201ENST00000412054 408 ntBASIC3.89□□□□□ -1.79
HPS3Q969F9 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.89□□□□□ -1.79
HPS3Q969F9 AC138393.2-201ENST00000414742 246 ntBASIC3.89□□□□□ -1.79
HPS3Q969F9 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC3.89□□□□□ -1.79
HPS3Q969F9 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.89□□□□□ -1.79
HPS3Q969F9 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.89□□□□□ -1.79
HPS3Q969F9 RPS24P13-201ENST00000442520 397 ntBASIC3.89□□□□□ -1.79
HPS3Q969F9 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC3.89□□□□□ -1.79
HPS3Q969F9 AC008264.1-201ENST00000447612 367 ntBASIC3.89□□□□□ -1.79
HPS3Q969F9 PRSS3P4-201ENST00000453323 162 ntBASIC3.89□□□□□ -1.79
HPS3Q969F9 RNA5SP310-201ENST00000459084 116 ntBASIC3.89□□□□□ -1.79
HPS3Q969F9 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC3.89□□□□□ -1.79
HPS3Q969F9 AC104136.1-201ENST00000512969 394 ntBASIC3.89□□□□□ -1.79
HPS3Q969F9 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.89□□□□□ -1.79
HPS3Q969F9 CASP1P1-201ENST00000526345 212 ntBASIC3.89□□□□□ -1.79
HPS3Q969F9 AC069200.1-201ENST00000609511 323 ntBASIC3.89□□□□□ -1.79
HPS3Q969F9 AC027309.3-201ENST00000623419 351 ntBASIC3.89□□□□□ -1.79
HPS3Q969F9 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
HPS3Q969F9 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.89□□□□□ -1.79
HPS3Q969F9 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.89□□□□□ -1.79
HPS3Q969F9 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
HPS3Q969F9 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
HPS3Q969F9 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.89□□□□□ -1.79
HPS3Q969F9 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.88□□□□□ -1.79
HPS3Q969F9 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
HPS3Q969F9 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
HPS3Q969F9 ZNF826P-207ENST00000622273 1910 ntBASIC3.88□□□□□ -1.79
HPS3Q969F9 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
HPS3Q969F9 AL359693.1-201ENST00000614959 2407 ntBASIC3.88□□□□□ -1.79
HPS3Q969F9 RNA5SP295-201ENST00000362655 121 ntBASIC3.88□□□□□ -1.79
HPS3Q969F9 Y_RNA.86-201ENST00000363020 111 ntBASIC3.88□□□□□ -1.79
HPS3Q969F9 Y_RNA.160-201ENST00000363677 92 ntBASIC3.88□□□□□ -1.79
HPS3Q969F9 SNORA4.3-201ENST00000365564 137 ntBASIC3.88□□□□□ -1.79
HPS3Q969F9 RNU4-20P-201ENST00000365601 151 ntBASIC3.88□□□□□ -1.79
HPS3Q969F9 RNU6-393P-201ENST00000384475 107 ntBASIC3.88□□□□□ -1.79
HPS3Q969F9 MIR514A2-201ENST00000385131 88 ntBASIC3.88□□□□□ -1.79
HPS3Q969F9 MIR514A3-201ENST00000385132 88 ntBASIC3.88□□□□□ -1.79
HPS3Q969F9 Y_RNA.604-201ENST00000410574 102 ntBASIC3.88□□□□□ -1.79
HPS3Q969F9 AC063979.1-201ENST00000415539 377 ntBASIC3.88□□□□□ -1.79
HPS3Q969F9 AC092047.1-201ENST00000424997 240 ntBASIC3.88□□□□□ -1.79
HPS3Q969F9 AL513185.2-201ENST00000425543 193 ntBASIC3.88□□□□□ -1.79
HPS3Q969F9 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC3.88□□□□□ -1.79
HPS3Q969F9 SNRPEP4-201ENST00000435815 279 ntBASIC3.88□□□□□ -1.79
HPS3Q969F9 HMGB3P11-201ENST00000440127 604 ntBASIC3.88□□□□□ -1.79
HPS3Q969F9 FABP5P15-201ENST00000453566 214 ntBASIC3.88□□□□□ -1.79
HPS3Q969F9 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.88□□□□□ -1.79
HPS3Q969F9 U3.44-201ENST00000458938 192 ntBASIC3.88□□□□□ -1.79
HPS3Q969F9 AC004801.2-202ENST00000463559 283 ntBASIC3.88□□□□□ -1.79
HPS3Q969F9 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC3.88□□□□□ -1.79
HPS3Q969F9 MTCYBP18-201ENST00000501056 747 ntBASIC3.88□□□□□ -1.79
HPS3Q969F9 AC098799.2-201ENST00000509466 868 ntBASIC3.88□□□□□ -1.79
HPS3Q969F9 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.88□□□□□ -1.79
HPS3Q969F9 RNU6-1315P-201ENST00000517187 99 ntBASIC3.88□□□□□ -1.79
HPS3Q969F9 IL7-206ENST00000520269 456 ntTSL 3 BASIC3.88□□□□□ -1.79
HPS3Q969F9 CENPUP1-201ENST00000526649 1202 ntBASIC3.88□□□□□ -1.79
HPS3Q969F9 AC078814.3-201ENST00000553036 491 ntBASIC3.88□□□□□ -1.79
HPS3Q969F9 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms