Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.62□□□□□ -1.83
ATG4AQ8WYN0 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.62□□□□□ -1.83
ATG4AQ8WYN0 AL357552.1-201ENST00000445254 415 ntBASIC3.62□□□□□ -1.83
ATG4AQ8WYN0 AL645939.1-201ENST00000453429 797 ntBASIC3.62□□□□□ -1.83
ATG4AQ8WYN0 RNU7-167P-201ENST00000459160 62 ntBASIC3.62□□□□□ -1.83
ATG4AQ8WYN0 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
ATG4AQ8WYN0 AC012181.1-201ENST00000479895 423 ntBASIC3.62□□□□□ -1.83
ATG4AQ8WYN0 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.62□□□□□ -1.83
ATG4AQ8WYN0 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
ATG4AQ8WYN0 AL359273.1-201ENST00000510918 627 ntBASIC3.62□□□□□ -1.83
ATG4AQ8WYN0 RNU2-69P-201ENST00000516061 100 ntBASIC3.62□□□□□ -1.83
ATG4AQ8WYN0 SNORA70.14-201ENST00000516205 110 ntBASIC3.62□□□□□ -1.83
ATG4AQ8WYN0 SCARNA15.2-201ENST00000516409 127 ntBASIC3.62□□□□□ -1.83
ATG4AQ8WYN0 RNU6-914P-201ENST00000516749 109 ntBASIC3.62□□□□□ -1.83
ATG4AQ8WYN0 RNU6-1073P-201ENST00000517182 106 ntBASIC3.62□□□□□ -1.83
ATG4AQ8WYN0 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.62□□□□□ -1.83
ATG4AQ8WYN0 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC3.62□□□□□ -1.83
ATG4AQ8WYN0 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.62□□□□□ -1.83
ATG4AQ8WYN0 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.62□□□□□ -1.83
ATG4AQ8WYN0 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.62□□□□□ -1.83
ATG4AQ8WYN0 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.62□□□□□ -1.83
ATG4AQ8WYN0 AC002545.1-201ENST00000592511 181 ntBASIC3.62□□□□□ -1.83
ATG4AQ8WYN0 VN1R85P-201ENST00000601587 426 ntBASIC3.62□□□□□ -1.83
ATG4AQ8WYN0 AC113139.1-201ENST00000605049 239 ntBASIC3.62□□□□□ -1.83
ATG4AQ8WYN0 DUSP12P1-201ENST00000612874 516 ntBASIC3.62□□□□□ -1.83
ATG4AQ8WYN0 uc_338.15-201ENST00000615470 191 ntBASIC3.62□□□□□ -1.83
ATG4AQ8WYN0 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.62□□□□□ -1.83
ATG4AQ8WYN0 AL513302.2-201ENST00000562313 1842 ntBASIC3.62□□□□□ -1.83
ATG4AQ8WYN0 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.62□□□□□ -1.83
ATG4AQ8WYN0 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
ATG4AQ8WYN0 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
ATG4AQ8WYN0 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
ATG4AQ8WYN0 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
ATG4AQ8WYN0 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.62□□□□□ -1.83
ATG4AQ8WYN0 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
ATG4AQ8WYN0 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
ATG4AQ8WYN0 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
ATG4AQ8WYN0 AL021368.2-201ENST00000606125 5352 ntBASIC3.61□□□□□ -1.83
ATG4AQ8WYN0 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.61□□□□□ -1.83
ATG4AQ8WYN0 RNA5SP515-201ENST00000364570 118 ntBASIC3.61□□□□□ -1.83
ATG4AQ8WYN0 Y_RNA.384-201ENST00000383909 102 ntBASIC3.61□□□□□ -1.83
ATG4AQ8WYN0 RPLP0P7-201ENST00000416050 667 ntBASIC3.61□□□□□ -1.83
ATG4AQ8WYN0 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.61□□□□□ -1.83
ATG4AQ8WYN0 RPL7P2-201ENST00000427639 268 ntBASIC3.61□□□□□ -1.83
ATG4AQ8WYN0 BX679664.1-201ENST00000434429 253 ntBASIC3.61□□□□□ -1.83
ATG4AQ8WYN0 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.61□□□□□ -1.83
ATG4AQ8WYN0 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC3.61□□□□□ -1.83
ATG4AQ8WYN0 AC010401.1-201ENST00000463867 348 ntBASIC3.61□□□□□ -1.83
ATG4AQ8WYN0 AP000873.1-201ENST00000463987 400 ntBASIC3.61□□□□□ -1.83
ATG4AQ8WYN0 OARD1-209ENST00000471367 401 ntTSL 2 BASIC3.61□□□□□ -1.83
ATG4AQ8WYN0 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.61□□□□□ -1.83
ATG4AQ8WYN0 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC3.61□□□□□ -1.83
ATG4AQ8WYN0 Y_RNA.701-201ENST00000516812 110 ntBASIC3.61□□□□□ -1.83
ATG4AQ8WYN0 IL7-206ENST00000520269 456 ntTSL 3 BASIC3.61□□□□□ -1.83
ATG4AQ8WYN0 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.61□□□□□ -1.83
ATG4AQ8WYN0 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.61□□□□□ -1.83
ATG4AQ8WYN0 ATP1B3P1-201ENST00000605365 821 ntBASIC3.61□□□□□ -1.83
ATG4AQ8WYN0 AC016727.1-205ENST00000605437 569 ntBASIC3.61□□□□□ -1.83
ATG4AQ8WYN0 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.61□□□□□ -1.83
ATG4AQ8WYN0 AL160413.1-201ENST00000622780 310 ntBASIC3.61□□□□□ -1.83
ATG4AQ8WYN0 AP003355.3-201ENST00000623465 114 ntBASIC3.61□□□□□ -1.83
ATG4AQ8WYN0 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.61□□□□□ -1.83
ATG4AQ8WYN0 MTND4P23-201ENST00000447723 1363 ntBASIC3.61□□□□□ -1.83
ATG4AQ8WYN0 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
ATG4AQ8WYN0 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
ATG4AQ8WYN0 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC3.61□□□□□ -1.83
ATG4AQ8WYN0 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.6□□□□□ -1.83
ATG4AQ8WYN0 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
ATG4AQ8WYN0 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
ATG4AQ8WYN0 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
ATG4AQ8WYN0 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
ATG4AQ8WYN0 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.6□□□□□ -1.83
ATG4AQ8WYN0 RNU6-1252P-201ENST00000363054 104 ntBASIC3.6□□□□□ -1.83
ATG4AQ8WYN0 RNU6-254P-201ENST00000363377 107 ntBASIC3.6□□□□□ -1.83
ATG4AQ8WYN0 Y_RNA.387-201ENST00000383918 102 ntBASIC3.6□□□□□ -1.83
ATG4AQ8WYN0 Y_RNA.431-201ENST00000384086 102 ntBASIC3.6□□□□□ -1.83
ATG4AQ8WYN0 Y_RNA.534-201ENST00000384599 112 ntBASIC3.6□□□□□ -1.83
ATG4AQ8WYN0 MIR1290-201ENST00000408735 78 ntBASIC3.6□□□□□ -1.83
ATG4AQ8WYN0 SNORA11-201ENST00000408789 128 ntBASIC3.6□□□□□ -1.83
ATG4AQ8WYN0 BX842559.1-201ENST00000419615 532 ntBASIC3.6□□□□□ -1.83
ATG4AQ8WYN0 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.6□□□□□ -1.83
ATG4AQ8WYN0 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.6□□□□□ -1.83
ATG4AQ8WYN0 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC3.6□□□□□ -1.83
ATG4AQ8WYN0 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.6□□□□□ -1.83
ATG4AQ8WYN0 AC007677.1-201ENST00000445757 515 ntBASIC3.6□□□□□ -1.83
ATG4AQ8WYN0 Y_RNA.632-201ENST00000459189 102 ntBASIC3.6□□□□□ -1.83
ATG4AQ8WYN0 RPL37P6-201ENST00000460682 294 ntBASIC3.6□□□□□ -1.83
ATG4AQ8WYN0 MTND4P17-201ENST00000470444 350 ntBASIC3.6□□□□□ -1.83
ATG4AQ8WYN0 AP002812.1-201ENST00000495378 474 ntBASIC3.6□□□□□ -1.83
ATG4AQ8WYN0 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.6□□□□□ -1.83
ATG4AQ8WYN0 AC104136.1-201ENST00000512969 394 ntBASIC3.6□□□□□ -1.83
ATG4AQ8WYN0 APOOP4-201ENST00000513530 597 ntBASIC3.6□□□□□ -1.83
ATG4AQ8WYN0 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.6□□□□□ -1.83
ATG4AQ8WYN0 SNORA31.8-201ENST00000516327 108 ntBASIC3.6□□□□□ -1.83
ATG4AQ8WYN0 SNORA70.19-201ENST00000516717 90 ntBASIC3.6□□□□□ -1.83
ATG4AQ8WYN0 RNU6-256P-201ENST00000516747 97 ntBASIC3.6□□□□□ -1.83
ATG4AQ8WYN0 RNU6-1088P-201ENST00000516850 104 ntBASIC3.6□□□□□ -1.83
ATG4AQ8WYN0 RNU6-1231P-201ENST00000517185 103 ntBASIC3.6□□□□□ -1.83
ATG4AQ8WYN0 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC3.6□□□□□ -1.83
ATG4AQ8WYN0 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms