Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 SNORA31.26-201ENST00000517250 137 ntBASIC3.1□□□□□ -1.91
SLC44A1Q8WWI5 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.1□□□□□ -1.91
SLC44A1Q8WWI5 MTND4LP26-201ENST00000518144 282 ntBASIC3.1□□□□□ -1.91
SLC44A1Q8WWI5 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC3.1□□□□□ -1.91
SLC44A1Q8WWI5 ATP5F1P5-201ENST00000526403 760 ntBASIC3.1□□□□□ -1.91
SLC44A1Q8WWI5 OR5AQ1P-201ENST00000527596 927 ntBASIC3.1□□□□□ -1.91
SLC44A1Q8WWI5 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC3.1□□□□□ -1.91
SLC44A1Q8WWI5 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
SLC44A1Q8WWI5 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC3.1□□□□□ -1.91
SLC44A1Q8WWI5 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.1□□□□□ -1.91
SLC44A1Q8WWI5 DPPA3P3-201ENST00000603842 430 ntBASIC3.1□□□□□ -1.91
SLC44A1Q8WWI5 AC104763.2-201ENST00000604179 382 ntBASIC3.1□□□□□ -1.91
SLC44A1Q8WWI5 AC013553.2-201ENST00000604244 589 ntBASIC3.1□□□□□ -1.91
SLC44A1Q8WWI5 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.1□□□□□ -1.91
SLC44A1Q8WWI5 AC034102.8-201ENST00000615146 484 ntBASIC3.1□□□□□ -1.91
SLC44A1Q8WWI5 SRP54-214ENST00000630962 162 ntTSL 5 BASIC3.1□□□□□ -1.91
SLC44A1Q8WWI5 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.1□□□□□ -1.91
SLC44A1Q8WWI5 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
SLC44A1Q8WWI5 AC073346.2-201ENST00000624724 2058 ntBASIC3.1□□□□□ -1.91
SLC44A1Q8WWI5 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
SLC44A1Q8WWI5 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.1□□□□□ -1.91
SLC44A1Q8WWI5 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
SLC44A1Q8WWI5 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
SLC44A1Q8WWI5 ELF2P3-201ENST00000445099 1506 ntBASIC3.09□□□□□ -1.91
SLC44A1Q8WWI5 RNU6-179P-201ENST00000363350 107 ntBASIC3.09□□□□□ -1.91
SLC44A1Q8WWI5 Y_RNA.372-201ENST00000365599 102 ntBASIC3.09□□□□□ -1.91
SLC44A1Q8WWI5 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
SLC44A1Q8WWI5 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.09□□□□□ -1.91
SLC44A1Q8WWI5 RNU6-741P-201ENST00000383889 107 ntBASIC3.09□□□□□ -1.91
SLC44A1Q8WWI5 Y_RNA.409-201ENST00000383990 98 ntBASIC3.09□□□□□ -1.91
SLC44A1Q8WWI5 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
SLC44A1Q8WWI5 AL590002.1-201ENST00000406554 418 ntBASIC3.09□□□□□ -1.91
SLC44A1Q8WWI5 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.09□□□□□ -1.91
SLC44A1Q8WWI5 RN7SKP58-201ENST00000411010 305 ntBASIC3.09□□□□□ -1.91
SLC44A1Q8WWI5 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
SLC44A1Q8WWI5 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.09□□□□□ -1.91
SLC44A1Q8WWI5 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC3.09□□□□□ -1.91
SLC44A1Q8WWI5 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC3.09□□□□□ -1.91
SLC44A1Q8WWI5 AC091390.3-201ENST00000426478 338 ntBASIC3.09□□□□□ -1.91
SLC44A1Q8WWI5 AC093106.2-201ENST00000428212 385 ntBASIC3.09□□□□□ -1.91
SLC44A1Q8WWI5 RPL23AP83-201ENST00000434984 473 ntBASIC3.09□□□□□ -1.91
SLC44A1Q8WWI5 AC005019.1-201ENST00000436455 431 ntBASIC3.09□□□□□ -1.91
SLC44A1Q8WWI5 NDUFB4P6-201ENST00000436819 366 ntBASIC3.09□□□□□ -1.91
SLC44A1Q8WWI5 RPS3AP12-201ENST00000443616 753 ntBASIC3.09□□□□□ -1.91
SLC44A1Q8WWI5 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
SLC44A1Q8WWI5 AC083798.1-201ENST00000472671 131 ntBASIC3.09□□□□□ -1.91
SLC44A1Q8WWI5 RN7SL633P-201ENST00000488974 297 ntBASIC3.09□□□□□ -1.91
SLC44A1Q8WWI5 SNORA40.12-201ENST00000516329 111 ntBASIC3.09□□□□□ -1.91
SLC44A1Q8WWI5 SNORA70.24-201ENST00000517233 118 ntBASIC3.09□□□□□ -1.91
SLC44A1Q8WWI5 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.09□□□□□ -1.91
SLC44A1Q8WWI5 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC3.09□□□□□ -1.91
SLC44A1Q8WWI5 OR5B19P-201ENST00000531766 928 ntBASIC3.09□□□□□ -1.91
SLC44A1Q8WWI5 AK6P1-201ENST00000540219 478 ntBASIC3.09□□□□□ -1.91
SLC44A1Q8WWI5 AP001094.1-201ENST00000579805 193 ntBASIC3.09□□□□□ -1.91
SLC44A1Q8WWI5 AC002545.1-201ENST00000592511 181 ntBASIC3.09□□□□□ -1.91
SLC44A1Q8WWI5 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.09□□□□□ -1.91
SLC44A1Q8WWI5 AC007621.1-201ENST00000604544 437 ntBASIC3.09□□□□□ -1.91
SLC44A1Q8WWI5 AL442067.2-201ENST00000614033 363 ntBASIC3.09□□□□□ -1.91
SLC44A1Q8WWI5 uc_338.11-201ENST00000619132 160 ntBASIC3.09□□□□□ -1.91
SLC44A1Q8WWI5 AL160394.1-201ENST00000624765 724 ntBASIC3.09□□□□□ -1.91
SLC44A1Q8WWI5 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.09□□□□□ -1.91
SLC44A1Q8WWI5 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.09□□□□□ -1.92
SLC44A1Q8WWI5 AC103710.2-202ENST00000641454 2853 ntBASIC3.09□□□□□ -1.92
SLC44A1Q8WWI5 AC093908.1-201ENST00000623125 8092 ntBASIC3.09□□□□□ -1.92
SLC44A1Q8WWI5 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.09□□□□□ -1.92
SLC44A1Q8WWI5 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
SLC44A1Q8WWI5 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.08□□□□□ -1.92
SLC44A1Q8WWI5 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
SLC44A1Q8WWI5 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
SLC44A1Q8WWI5 RNY4P14-201ENST00000363656 96 ntBASIC3.08□□□□□ -1.92
SLC44A1Q8WWI5 RNU6-61P-201ENST00000365528 109 ntBASIC3.08□□□□□ -1.92
SLC44A1Q8WWI5 Y_RNA.450-201ENST00000384198 113 ntBASIC3.08□□□□□ -1.92
SLC44A1Q8WWI5 SNORA9-201ENST00000384215 133 ntBASIC3.08□□□□□ -1.92
SLC44A1Q8WWI5 SNORA24.1-201ENST00000384401 135 ntBASIC3.08□□□□□ -1.92
SLC44A1Q8WWI5 MIR491-201ENST00000384877 84 ntBASIC3.08□□□□□ -1.92
SLC44A1Q8WWI5 RNU6-1158P-201ENST00000391167 107 ntBASIC3.08□□□□□ -1.92
SLC44A1Q8WWI5 AL139397.2-201ENST00000404529 772 ntBASIC3.08□□□□□ -1.92
SLC44A1Q8WWI5 RNU2-9P-201ENST00000410194 145 ntBASIC3.08□□□□□ -1.92
SLC44A1Q8WWI5 RNU2-33P-201ENST00000410344 192 ntBASIC3.08□□□□□ -1.92
SLC44A1Q8WWI5 MRPL50P2-201ENST00000416821 482 ntBASIC3.08□□□□□ -1.92
SLC44A1Q8WWI5 AL109913.1-201ENST00000421173 514 ntBASIC3.08□□□□□ -1.92
SLC44A1Q8WWI5 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.08□□□□□ -1.92
SLC44A1Q8WWI5 AC005300.1-201ENST00000428401 373 ntBASIC3.08□□□□□ -1.92
SLC44A1Q8WWI5 RPL21P40-201ENST00000428586 483 ntBASIC3.08□□□□□ -1.92
SLC44A1Q8WWI5 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.08□□□□□ -1.92
SLC44A1Q8WWI5 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC3.08□□□□□ -1.92
SLC44A1Q8WWI5 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.08□□□□□ -1.92
SLC44A1Q8WWI5 AC009237.8-201ENST00000445492 379 ntBASIC3.08□□□□□ -1.92
SLC44A1Q8WWI5 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC3.08□□□□□ -1.92
SLC44A1Q8WWI5 FDX1P2-201ENST00000450769 375 ntBASIC3.08□□□□□ -1.92
SLC44A1Q8WWI5 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC3.08□□□□□ -1.92
SLC44A1Q8WWI5 RNU7-182P-201ENST00000459009 62 ntBASIC3.08□□□□□ -1.92
SLC44A1Q8WWI5 RNU6-953P-201ENST00000459154 107 ntBASIC3.08□□□□□ -1.92
SLC44A1Q8WWI5 RPL32P34-201ENST00000486380 400 ntBASIC3.08□□□□□ -1.92
SLC44A1Q8WWI5 RPL36AP51-201ENST00000487216 318 ntBASIC3.08□□□□□ -1.92
SLC44A1Q8WWI5 RPL30P5-201ENST00000494923 336 ntBASIC3.08□□□□□ -1.92
SLC44A1Q8WWI5 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.08□□□□□ -1.92
SLC44A1Q8WWI5 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.08□□□□□ -1.92
SLC44A1Q8WWI5 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.08□□□□□ -1.92
SLC44A1Q8WWI5 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms