Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 RNU4-53P-201ENST00000410828 140 ntBASIC3.17□□□□□ -1.9
SNED1Q8TER0 MTCO3P12-201ENST00000416718 547 ntBASIC3.17□□□□□ -1.9
SNED1Q8TER0 ISCA1P6-201ENST00000427740 390 ntBASIC3.17□□□□□ -1.9
SNED1Q8TER0 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.17□□□□□ -1.9
SNED1Q8TER0 AC109583.1-201ENST00000432156 268 ntBASIC3.17□□□□□ -1.9
SNED1Q8TER0 ARPC3P1-201ENST00000437218 533 ntBASIC3.17□□□□□ -1.9
SNED1Q8TER0 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
SNED1Q8TER0 CACYBPP2-201ENST00000453625 678 ntBASIC3.17□□□□□ -1.9
SNED1Q8TER0 AC092757.1-201ENST00000467293 467 ntBASIC3.17□□□□□ -1.9
SNED1Q8TER0 HMGB1P29-201ENST00000505659 499 ntBASIC3.17□□□□□ -1.9
SNED1Q8TER0 AC018710.1-201ENST00000506509 158 ntBASIC3.17□□□□□ -1.9
SNED1Q8TER0 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC3.17□□□□□ -1.9
SNED1Q8TER0 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.17□□□□□ -1.9
SNED1Q8TER0 RNU1-61P-201ENST00000516107 151 ntBASIC3.17□□□□□ -1.9
SNED1Q8TER0 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC3.17□□□□□ -1.9
SNED1Q8TER0 AF235103.2-201ENST00000525753 346 ntBASIC3.17□□□□□ -1.9
SNED1Q8TER0 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC3.17□□□□□ -1.9
SNED1Q8TER0 MAL2-203ENST00000534619 578 ntTSL 4 BASIC3.17□□□□□ -1.9
SNED1Q8TER0 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC3.17□□□□□ -1.9
SNED1Q8TER0 AL512360.1-201ENST00000555346 234 ntBASIC3.17□□□□□ -1.9
SNED1Q8TER0 AL138976.2-201ENST00000563989 694 ntBASIC3.17□□□□□ -1.9
SNED1Q8TER0 AC025678.1-201ENST00000567861 338 ntBASIC3.17□□□□□ -1.9
SNED1Q8TER0 AC025449.1-201ENST00000603896 529 ntBASIC3.17□□□□□ -1.9
SNED1Q8TER0 AP001521.1-201ENST00000609150 300 ntBASIC3.17□□□□□ -1.9
SNED1Q8TER0 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC3.17□□□□□ -1.9
SNED1Q8TER0 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC3.17□□□□□ -1.9
SNED1Q8TER0 AL136221.1-201ENST00000621449 509 ntBASIC3.17□□□□□ -1.9
SNED1Q8TER0 AC092628.2-201ENST00000622492 339 ntBASIC3.17□□□□□ -1.9
SNED1Q8TER0 AC112204.3-201ENST00000623822 332 ntBASIC3.17□□□□□ -1.9
SNED1Q8TER0 MIR1321-201ENST00000637766 79 ntBASIC3.17□□□□□ -1.9
SNED1Q8TER0 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SNED1Q8TER0 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SNED1Q8TER0 AL136164.4-201ENST00000625013 2135 ntBASIC3.16□□□□□ -1.9
SNED1Q8TER0 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
SNED1Q8TER0 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.16□□□□□ -1.9
SNED1Q8TER0 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
SNED1Q8TER0 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
SNED1Q8TER0 RNU6-251P-201ENST00000363235 104 ntBASIC3.16□□□□□ -1.9
SNED1Q8TER0 RNU6-1085P-201ENST00000363576 107 ntBASIC3.16□□□□□ -1.9
SNED1Q8TER0 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
SNED1Q8TER0 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SNED1Q8TER0 Y_RNA.535-201ENST00000384612 99 ntBASIC3.16□□□□□ -1.9
SNED1Q8TER0 MIR649-201ENST00000384843 97 ntBASIC3.16□□□□□ -1.9
SNED1Q8TER0 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SNED1Q8TER0 RNU6ATAC37P-201ENST00000408328 131 ntBASIC3.16□□□□□ -1.9
SNED1Q8TER0 RNU4-65P-201ENST00000410473 140 ntBASIC3.16□□□□□ -1.9
SNED1Q8TER0 Y_RNA.608-201ENST00000410647 95 ntBASIC3.16□□□□□ -1.9
SNED1Q8TER0 RNU6-195P-201ENST00000411352 109 ntBASIC3.16□□□□□ -1.9
SNED1Q8TER0 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC3.16□□□□□ -1.9
SNED1Q8TER0 RPLP0P7-201ENST00000416050 667 ntBASIC3.16□□□□□ -1.9
SNED1Q8TER0 PIGFP2-201ENST00000421400 651 ntBASIC3.16□□□□□ -1.9
SNED1Q8TER0 AC002486.1-201ENST00000435098 391 ntBASIC3.16□□□□□ -1.9
SNED1Q8TER0 AC009961.2-201ENST00000435771 251 ntBASIC3.16□□□□□ -1.9
SNED1Q8TER0 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC3.16□□□□□ -1.9
SNED1Q8TER0 BX322784.1-201ENST00000455793 1077 ntBASIC3.16□□□□□ -1.9
SNED1Q8TER0 FAM172BP-201ENST00000487497 1089 ntBASIC3.16□□□□□ -1.9
SNED1Q8TER0 AC106872.3-201ENST00000495104 446 ntBASIC3.16□□□□□ -1.9
SNED1Q8TER0 AC112204.1-201ENST00000502591 103 ntBASIC3.16□□□□□ -1.9
SNED1Q8TER0 KLRA1P-201ENST00000503499 986 ntBASIC3.16□□□□□ -1.9
SNED1Q8TER0 HMGB3P15-201ENST00000507326 574 ntBASIC3.16□□□□□ -1.9
SNED1Q8TER0 AC093809.1-201ENST00000509155 340 ntBASIC3.16□□□□□ -1.9
SNED1Q8TER0 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC3.16□□□□□ -1.9
SNED1Q8TER0 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC3.16□□□□□ -1.9
SNED1Q8TER0 OR5AL2P-201ENST00000532185 920 ntBASIC3.16□□□□□ -1.9
SNED1Q8TER0 LSM6P2-201ENST00000552208 177 ntBASIC3.16□□□□□ -1.9
SNED1Q8TER0 MIR4635-201ENST00000583759 79 ntBASIC3.16□□□□□ -1.9
SNED1Q8TER0 AC060780.3-201ENST00000589464 80 ntBASIC3.16□□□□□ -1.9
SNED1Q8TER0 AL669831.4-202ENST00000590817 238 ntBASIC3.16□□□□□ -1.9
SNED1Q8TER0 AC007363.1-201ENST00000604736 620 ntBASIC3.16□□□□□ -1.9
SNED1Q8TER0 HSPE1P14-201ENST00000605812 302 ntBASIC3.16□□□□□ -1.9
SNED1Q8TER0 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.16□□□□□ -1.9
SNED1Q8TER0 PISRT1-201ENST00000626175 531 ntBASIC3.16□□□□□ -1.9
SNED1Q8TER0 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC3.16□□□□□ -1.9
SNED1Q8TER0 AC024614.3-201ENST00000637860 256 ntBASIC3.16□□□□□ -1.9
SNED1Q8TER0 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
SNED1Q8TER0 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.16□□□□□ -1.9
SNED1Q8TER0 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
SNED1Q8TER0 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SNED1Q8TER0 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.16□□□□□ -1.9
SNED1Q8TER0 OR4G11P-202ENST00000642116 1414 ntBASIC3.15□□□□□ -1.9
SNED1Q8TER0 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.9
SNED1Q8TER0 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
SNED1Q8TER0 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.15□□□□□ -1.9
SNED1Q8TER0 AC016717.2-201ENST00000609089 5141 ntBASIC3.15□□□□□ -1.9
SNED1Q8TER0 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
SNED1Q8TER0 Y_RNA.1-201ENST00000352915 104 ntBASIC3.15□□□□□ -1.91
SNED1Q8TER0 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
SNED1Q8TER0 RNU6-629P-201ENST00000384061 103 ntBASIC3.15□□□□□ -1.91
SNED1Q8TER0 MIR591-201ENST00000385290 95 ntBASIC3.15□□□□□ -1.91
SNED1Q8TER0 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
SNED1Q8TER0 RNU2-28P-201ENST00000410457 189 ntBASIC3.15□□□□□ -1.91
SNED1Q8TER0 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
SNED1Q8TER0 SPA17P1-201ENST00000416656 452 ntBASIC3.15□□□□□ -1.91
SNED1Q8TER0 ZNF90P2-204ENST00000419323 1075 ntBASIC3.15□□□□□ -1.91
SNED1Q8TER0 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC3.15□□□□□ -1.91
SNED1Q8TER0 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.15□□□□□ -1.91
SNED1Q8TER0 SNRPEP7-201ENST00000438350 220 ntBASIC3.15□□□□□ -1.91
SNED1Q8TER0 MTCO1P27-201ENST00000448269 226 ntBASIC3.15□□□□□ -1.91
SNED1Q8TER0 TRGVB-201ENST00000453257 471 ntBASIC3.15□□□□□ -1.91
SNED1Q8TER0 Z82190.1-201ENST00000454534 490 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 175.1 ms