Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.26□□□□□ -2.05
CCDC71LQ8N9Z2 AL360221.1-201ENST00000445989 335 ntBASIC2.26□□□□□ -2.05
CCDC71LQ8N9Z2 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.26□□□□□ -2.05
CCDC71LQ8N9Z2 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
CCDC71LQ8N9Z2 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.26□□□□□ -2.05
CCDC71LQ8N9Z2 MTND1P12-201ENST00000455231 147 ntBASIC2.26□□□□□ -2.05
CCDC71LQ8N9Z2 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC2.26□□□□□ -2.05
CCDC71LQ8N9Z2 RPL26P9-201ENST00000457466 433 ntBASIC2.26□□□□□ -2.05
CCDC71LQ8N9Z2 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC2.26□□□□□ -2.05
CCDC71LQ8N9Z2 AC126182.1-201ENST00000478134 357 ntBASIC2.26□□□□□ -2.05
CCDC71LQ8N9Z2 RPL36AP51-201ENST00000487216 318 ntBASIC2.26□□□□□ -2.05
CCDC71LQ8N9Z2 AC105252.1-201ENST00000503089 286 ntBASIC2.26□□□□□ -2.05
CCDC71LQ8N9Z2 AC010424.1-201ENST00000506336 297 ntBASIC2.26□□□□□ -2.05
CCDC71LQ8N9Z2 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC2.26□□□□□ -2.05
CCDC71LQ8N9Z2 HMGB3P3-201ENST00000510526 400 ntBASIC2.26□□□□□ -2.05
CCDC71LQ8N9Z2 MRPS36P2-201ENST00000512569 299 ntBASIC2.26□□□□□ -2.05
CCDC71LQ8N9Z2 AC091826.1-201ENST00000514065 313 ntBASIC2.26□□□□□ -2.05
CCDC71LQ8N9Z2 SCARNA13-201ENST00000516672 275 ntBASIC2.26□□□□□ -2.05
CCDC71LQ8N9Z2 RNA5SP165-201ENST00000517142 115 ntBASIC2.26□□□□□ -2.05
CCDC71LQ8N9Z2 AP006587.4-201ENST00000526053 529 ntBASIC2.26□□□□□ -2.05
CCDC71LQ8N9Z2 COX6CP5-201ENST00000527162 228 ntBASIC2.26□□□□□ -2.05
CCDC71LQ8N9Z2 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.26□□□□□ -2.05
CCDC71LQ8N9Z2 MIR5004-201ENST00000579078 107 ntBASIC2.26□□□□□ -2.05
CCDC71LQ8N9Z2 MIR3117-201ENST00000584034 78 ntBASIC2.26□□□□□ -2.05
CCDC71LQ8N9Z2 AC040904.1-201ENST00000590850 223 ntBASIC2.26□□□□□ -2.05
CCDC71LQ8N9Z2 AL161798.1-201ENST00000604630 131 ntBASIC2.26□□□□□ -2.05
CCDC71LQ8N9Z2 RN7SKP299-201ENST00000606679 301 ntBASIC2.26□□□□□ -2.05
CCDC71LQ8N9Z2 AC097065.2-201ENST00000608159 533 ntBASIC2.26□□□□□ -2.05
CCDC71LQ8N9Z2 AC103710.2-201ENST00000609912 942 ntBASIC2.26□□□□□ -2.05
CCDC71LQ8N9Z2 AC091304.9-201ENST00000612091 226 ntBASIC2.26□□□□□ -2.05
CCDC71LQ8N9Z2 AL133173.2-201ENST00000614270 90 ntBASIC2.26□□□□□ -2.05
CCDC71LQ8N9Z2 AP001506.1-201ENST00000615444 211 ntBASIC2.26□□□□□ -2.05
CCDC71LQ8N9Z2 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
CCDC71LQ8N9Z2 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
CCDC71LQ8N9Z2 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.26□□□□□ -2.05
CCDC71LQ8N9Z2 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
CCDC71LQ8N9Z2 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.25□□□□□ -2.05
CCDC71LQ8N9Z2 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.25□□□□□ -2.05
CCDC71LQ8N9Z2 U8.3-201ENST00000363321 132 ntBASIC2.25□□□□□ -2.05
CCDC71LQ8N9Z2 RNU6-461P-201ENST00000364195 107 ntBASIC2.25□□□□□ -2.05
CCDC71LQ8N9Z2 RNU1-100P-201ENST00000365255 165 ntBASIC2.25□□□□□ -2.05
CCDC71LQ8N9Z2 MIR524-201ENST00000385242 87 ntBASIC2.25□□□□□ -2.05
CCDC71LQ8N9Z2 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
CCDC71LQ8N9Z2 RPL23AP32-201ENST00000395315 459 ntBASIC2.25□□□□□ -2.05
CCDC71LQ8N9Z2 AC023141.4-201ENST00000412031 328 ntBASIC2.25□□□□□ -2.05
CCDC71LQ8N9Z2 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC2.25□□□□□ -2.05
CCDC71LQ8N9Z2 AL365338.1-201ENST00000422282 858 ntBASIC2.25□□□□□ -2.05
CCDC71LQ8N9Z2 AC104651.1-201ENST00000427559 735 ntBASIC2.25□□□□□ -2.05
CCDC71LQ8N9Z2 ELOCP14-201ENST00000428070 331 ntBASIC2.25□□□□□ -2.05
CCDC71LQ8N9Z2 AC104850.1-201ENST00000435940 476 ntBASIC2.25□□□□□ -2.05
CCDC71LQ8N9Z2 MTND4P32-201ENST00000437189 1237 ntBASIC2.25□□□□□ -2.05
CCDC71LQ8N9Z2 ELOCP7-201ENST00000439968 331 ntBASIC2.25□□□□□ -2.05
CCDC71LQ8N9Z2 MTND4P25-201ENST00000441039 533 ntBASIC2.25□□□□□ -2.05
CCDC71LQ8N9Z2 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.25□□□□□ -2.05
CCDC71LQ8N9Z2 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC2.25□□□□□ -2.05
CCDC71LQ8N9Z2 RPL37P4-201ENST00000448908 268 ntBASIC2.25□□□□□ -2.05
CCDC71LQ8N9Z2 GAPDHP17-201ENST00000449858 1001 ntBASIC2.25□□□□□ -2.05
CCDC71LQ8N9Z2 AC011753.1-201ENST00000451001 220 ntBASIC2.25□□□□□ -2.05
CCDC71LQ8N9Z2 MTND1P27-201ENST00000451117 902 ntBASIC2.25□□□□□ -2.05
CCDC71LQ8N9Z2 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC2.25□□□□□ -2.05
CCDC71LQ8N9Z2 snoU13.22-201ENST00000459428 104 ntBASIC2.25□□□□□ -2.05
CCDC71LQ8N9Z2 SNORD42A-201ENST00000459584 64 ntBASIC2.25□□□□□ -2.05
CCDC71LQ8N9Z2 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.25□□□□□ -2.05
CCDC71LQ8N9Z2 AC139453.3-201ENST00000493276 369 ntBASIC2.25□□□□□ -2.05
CCDC71LQ8N9Z2 AC114786.4-201ENST00000508771 728 ntBASIC2.25□□□□□ -2.05
CCDC71LQ8N9Z2 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.25□□□□□ -2.05
CCDC71LQ8N9Z2 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC2.25□□□□□ -2.05
CCDC71LQ8N9Z2 SNORA18.6-201ENST00000516792 115 ntBASIC2.25□□□□□ -2.05
CCDC71LQ8N9Z2 SNORA31.18-201ENST00000517043 134 ntBASIC2.25□□□□□ -2.05
CCDC71LQ8N9Z2 RN7SKP57-201ENST00000517248 293 ntBASIC2.25□□□□□ -2.05
CCDC71LQ8N9Z2 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC2.25□□□□□ -2.05
CCDC71LQ8N9Z2 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC2.25□□□□□ -2.05
CCDC71LQ8N9Z2 SUB1P1-201ENST00000524415 382 ntBASIC2.25□□□□□ -2.05
CCDC71LQ8N9Z2 AP000873.5-201ENST00000533906 236 ntBASIC2.25□□□□□ -2.05
CCDC71LQ8N9Z2 AC006362.1-201ENST00000567392 174 ntBASIC2.25□□□□□ -2.05
CCDC71LQ8N9Z2 MYL12BP1-201ENST00000569826 507 ntBASIC2.25□□□□□ -2.05
CCDC71LQ8N9Z2 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.25□□□□□ -2.05
CCDC71LQ8N9Z2 RSL24D1P11-201ENST00000591045 491 ntBASIC2.25□□□□□ -2.05
CCDC71LQ8N9Z2 AC004908.3-201ENST00000610248 625 ntBASIC2.25□□□□□ -2.05
CCDC71LQ8N9Z2 AC008498.1-201ENST00000613012 531 ntBASIC2.25□□□□□ -2.05
CCDC71LQ8N9Z2 AC011890.2-201ENST00000613393 294 ntBASIC2.25□□□□□ -2.05
CCDC71LQ8N9Z2 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.25□□□□□ -2.05
CCDC71LQ8N9Z2 AC010678.1-201ENST00000614118 713 ntBASIC2.25□□□□□ -2.05
CCDC71LQ8N9Z2 AC084757.4-201ENST00000616350 526 ntBASIC2.25□□□□□ -2.05
CCDC71LQ8N9Z2 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.25□□□□□ -2.05
CCDC71LQ8N9Z2 AC090582.1-201ENST00000636321 199 ntBASIC2.25□□□□□ -2.05
CCDC71LQ8N9Z2 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.25□□□□□ -2.05
CCDC71LQ8N9Z2 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.25□□□□□ -2.05
CCDC71LQ8N9Z2 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.25□□□□□ -2.05
CCDC71LQ8N9Z2 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.25□□□□□ -2.05
CCDC71LQ8N9Z2 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
CCDC71LQ8N9Z2 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.24□□□□□ -2.05
CCDC71LQ8N9Z2 MIR6073-201ENST00000352083 89 ntBASIC2.24□□□□□ -2.05
CCDC71LQ8N9Z2 SNORD56.2-201ENST00000363242 71 ntBASIC2.24□□□□□ -2.05
CCDC71LQ8N9Z2 RNU6-188P-201ENST00000364207 107 ntBASIC2.24□□□□□ -2.05
CCDC71LQ8N9Z2 RNU6-1072P-201ENST00000384703 107 ntBASIC2.24□□□□□ -2.05
CCDC71LQ8N9Z2 RNU6-443P-201ENST00000384780 107 ntBASIC2.24□□□□□ -2.05
CCDC71LQ8N9Z2 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
CCDC71LQ8N9Z2 RNA5SP171-201ENST00000391071 115 ntBASIC2.24□□□□□ -2.05
CCDC71LQ8N9Z2 RPA3-203ENST00000401447 414 ntTSL 3 BASIC2.24□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 146.9 ms