Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
CCDC33Q8N5R6 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CCDC33Q8N5R6 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
CCDC33Q8N5R6 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.68□□□□□ -1.82
CCDC33Q8N5R6 RNU6-193P-201ENST00000410977 107 ntBASIC3.68□□□□□ -1.82
CCDC33Q8N5R6 Z92545.1-201ENST00000411782 234 ntBASIC3.68□□□□□ -1.82
CCDC33Q8N5R6 MTND1P2-201ENST00000430604 821 ntBASIC3.68□□□□□ -1.82
CCDC33Q8N5R6 CYCSP32-201ENST00000440548 321 ntBASIC3.68□□□□□ -1.82
CCDC33Q8N5R6 RNU7-180P-201ENST00000459240 63 ntBASIC3.68□□□□□ -1.82
CCDC33Q8N5R6 AC008155.2-201ENST00000464337 397 ntBASIC3.68□□□□□ -1.82
CCDC33Q8N5R6 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.68□□□□□ -1.82
CCDC33Q8N5R6 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC3.68□□□□□ -1.82
CCDC33Q8N5R6 EIF4EP3-201ENST00000498782 656 ntBASIC3.68□□□□□ -1.82
CCDC33Q8N5R6 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.68□□□□□ -1.82
CCDC33Q8N5R6 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CCDC33Q8N5R6 RNA5SP401-201ENST00000515920 127 ntBASIC3.68□□□□□ -1.82
CCDC33Q8N5R6 SCARNA13-201ENST00000516672 275 ntBASIC3.68□□□□□ -1.82
CCDC33Q8N5R6 RNU6-1315P-201ENST00000517187 99 ntBASIC3.68□□□□□ -1.82
CCDC33Q8N5R6 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.68□□□□□ -1.82
CCDC33Q8N5R6 HIGD1AP1-201ENST00000550979 275 ntBASIC3.68□□□□□ -1.82
CCDC33Q8N5R6 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.68□□□□□ -1.82
CCDC33Q8N5R6 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC3.68□□□□□ -1.82
CCDC33Q8N5R6 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.68□□□□□ -1.82
CCDC33Q8N5R6 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.68□□□□□ -1.82
CCDC33Q8N5R6 AL138976.2-201ENST00000563989 694 ntBASIC3.68□□□□□ -1.82
CCDC33Q8N5R6 AC015917.1-201ENST00000579654 510 ntBASIC3.68□□□□□ -1.82
CCDC33Q8N5R6 AL670379.4-201ENST00000605279 254 ntBASIC3.68□□□□□ -1.82
CCDC33Q8N5R6 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
CCDC33Q8N5R6 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.68□□□□□ -1.82
CCDC33Q8N5R6 AL732372.2-225ENST00000642124 456 ntBASIC3.68□□□□□ -1.82
CCDC33Q8N5R6 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CCDC33Q8N5R6 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CCDC33Q8N5R6 HSPA8P4-201ENST00000511877 1920 ntBASIC3.68□□□□□ -1.82
CCDC33Q8N5R6 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.68□□□□□ -1.82
CCDC33Q8N5R6 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.67□□□□□ -1.82
CCDC33Q8N5R6 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CCDC33Q8N5R6 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.67□□□□□ -1.82
CCDC33Q8N5R6 AC005183.1-201ENST00000603687 1979 ntBASIC3.67□□□□□ -1.82
CCDC33Q8N5R6 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CCDC33Q8N5R6 RIOK3P1-201ENST00000418778 1528 ntBASIC3.67□□□□□ -1.82
CCDC33Q8N5R6 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CCDC33Q8N5R6 Y_RNA.295-201ENST00000364918 102 ntBASIC3.67□□□□□ -1.82
CCDC33Q8N5R6 RNU6-1283P-201ENST00000365314 105 ntBASIC3.67□□□□□ -1.82
CCDC33Q8N5R6 SNORA4.3-201ENST00000365564 137 ntBASIC3.67□□□□□ -1.82
CCDC33Q8N5R6 RNU6-116P-201ENST00000384042 109 ntBASIC3.67□□□□□ -1.82
CCDC33Q8N5R6 RNU6-1035P-201ENST00000384477 107 ntBASIC3.67□□□□□ -1.82
CCDC33Q8N5R6 RNU6-140P-201ENST00000384566 108 ntBASIC3.67□□□□□ -1.82
CCDC33Q8N5R6 MIR301A-201ENST00000385261 86 ntBASIC3.67□□□□□ -1.82
CCDC33Q8N5R6 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.67□□□□□ -1.82
CCDC33Q8N5R6 RNU6-1068P-201ENST00000410958 103 ntBASIC3.67□□□□□ -1.82
CCDC33Q8N5R6 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.67□□□□□ -1.82
CCDC33Q8N5R6 SNRPEP9-201ENST00000436794 238 ntBASIC3.67□□□□□ -1.82
CCDC33Q8N5R6 HMGB3P11-201ENST00000440127 604 ntBASIC3.67□□□□□ -1.82
CCDC33Q8N5R6 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.67□□□□□ -1.82
CCDC33Q8N5R6 CALM1P1-201ENST00000442082 433 ntBASIC3.67□□□□□ -1.82
CCDC33Q8N5R6 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC3.67□□□□□ -1.82
CCDC33Q8N5R6 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.67□□□□□ -1.82
CCDC33Q8N5R6 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC3.67□□□□□ -1.82
CCDC33Q8N5R6 CECR9-201ENST00000453421 199 ntBASIC3.67□□□□□ -1.82
CCDC33Q8N5R6 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC3.67□□□□□ -1.82
CCDC33Q8N5R6 SNRPFP3-201ENST00000457792 225 ntBASIC3.67□□□□□ -1.82
CCDC33Q8N5R6 RPL23AP14-201ENST00000468281 468 ntBASIC3.67□□□□□ -1.82
CCDC33Q8N5R6 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC3.67□□□□□ -1.82
CCDC33Q8N5R6 RPL30P14-201ENST00000482744 348 ntBASIC3.67□□□□□ -1.82
CCDC33Q8N5R6 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC3.67□□□□□ -1.82
CCDC33Q8N5R6 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.67□□□□□ -1.82
CCDC33Q8N5R6 RNU6-1178P-201ENST00000516674 107 ntBASIC3.67□□□□□ -1.82
CCDC33Q8N5R6 SNORD60.2-201ENST00000516883 86 ntBASIC3.67□□□□□ -1.82
CCDC33Q8N5R6 RNU6-143P-201ENST00000516942 93 ntBASIC3.67□□□□□ -1.82
CCDC33Q8N5R6 RN7SKP57-201ENST00000517248 293 ntBASIC3.67□□□□□ -1.82
CCDC33Q8N5R6 SUB1P1-201ENST00000524415 382 ntBASIC3.67□□□□□ -1.82
CCDC33Q8N5R6 AC011602.1-201ENST00000546484 331 ntBASIC3.67□□□□□ -1.82
CCDC33Q8N5R6 AC011611.1-201ENST00000552179 197 ntBASIC3.67□□□□□ -1.82
CCDC33Q8N5R6 AL163153.1-201ENST00000554223 283 ntBASIC3.67□□□□□ -1.82
CCDC33Q8N5R6 MIR3609-201ENST00000582661 80 ntBASIC3.67□□□□□ -1.82
CCDC33Q8N5R6 MIR4424-201ENST00000585257 86 ntBASIC3.67□□□□□ -1.82
CCDC33Q8N5R6 AP000907.4-201ENST00000604143 237 ntBASIC3.67□□□□□ -1.82
CCDC33Q8N5R6 FTX_3.1-201ENST00000610451 147 ntBASIC3.67□□□□□ -1.82
CCDC33Q8N5R6 DISC2.1-201ENST00000612827 205 ntBASIC3.67□□□□□ -1.82
CCDC33Q8N5R6 AC002553.4-201ENST00000616896 331 ntBASIC3.67□□□□□ -1.82
CCDC33Q8N5R6 AC068831.7-201ENST00000616954 363 ntBASIC3.67□□□□□ -1.82
CCDC33Q8N5R6 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CCDC33Q8N5R6 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.67□□□□□ -1.82
CCDC33Q8N5R6 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.67□□□□□ -1.82
CCDC33Q8N5R6 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CCDC33Q8N5R6 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CCDC33Q8N5R6 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.67□□□□□ -1.82
CCDC33Q8N5R6 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CCDC33Q8N5R6 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CCDC33Q8N5R6 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.66□□□□□ -1.82
CCDC33Q8N5R6 FTLP6-201ENST00000355274 422 ntBASIC3.66□□□□□ -1.82
CCDC33Q8N5R6 FRG1CP-201ENST00000358464 769 ntBASIC3.66□□□□□ -1.82
CCDC33Q8N5R6 RNU6-270P-201ENST00000364131 105 ntBASIC3.66□□□□□ -1.82
CCDC33Q8N5R6 RNU6-877P-201ENST00000383868 107 ntBASIC3.66□□□□□ -1.82
CCDC33Q8N5R6 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC3.66□□□□□ -1.82
CCDC33Q8N5R6 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.66□□□□□ -1.82
CCDC33Q8N5R6 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.66□□□□□ -1.82
CCDC33Q8N5R6 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC3.66□□□□□ -1.82
CCDC33Q8N5R6 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.66□□□□□ -1.82
CCDC33Q8N5R6 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms