Protein–RNA interactions for Protein: Q7Z6J0

SH3RF1, E3 ubiquitin-protein ligase SH3RF1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1Q7Z6J0 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
SH3RF1Q7Z6J0 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC5.44□□□□□ -1.54
SH3RF1Q7Z6J0 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
SH3RF1Q7Z6J0 RNU6-1167P-201ENST00000363227 94 ntBASIC5.44□□□□□ -1.54
SH3RF1Q7Z6J0 SNORD113.2-201ENST00000364166 89 ntBASIC5.44□□□□□ -1.54
SH3RF1Q7Z6J0 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SH3RF1Q7Z6J0 RNU6-44P-201ENST00000384045 107 ntBASIC5.44□□□□□ -1.54
SH3RF1Q7Z6J0 MIR23B-201ENST00000384832 97 ntBASIC5.44□□□□□ -1.54
SH3RF1Q7Z6J0 SNORA57.1-201ENST00000391227 145 ntBASIC5.44□□□□□ -1.54
SH3RF1Q7Z6J0 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC5.44□□□□□ -1.54
SH3RF1Q7Z6J0 AL592148.1-201ENST00000413568 445 ntBASIC5.44□□□□□ -1.54
SH3RF1Q7Z6J0 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC5.44□□□□□ -1.54
SH3RF1Q7Z6J0 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC5.44□□□□□ -1.54
SH3RF1Q7Z6J0 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC5.44□□□□□ -1.54
SH3RF1Q7Z6J0 RPS26P21-201ENST00000475397 348 ntBASIC5.44□□□□□ -1.54
SH3RF1Q7Z6J0 RNU6-709P-201ENST00000517257 104 ntBASIC5.44□□□□□ -1.54
SH3RF1Q7Z6J0 AC008694.2-201ENST00000517591 306 ntBASIC5.44□□□□□ -1.54
SH3RF1Q7Z6J0 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC5.44□□□□□ -1.54
SH3RF1Q7Z6J0 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC5.44□□□□□ -1.54
SH3RF1Q7Z6J0 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SH3RF1Q7Z6J0 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC5.43□□□□□ -1.54
SH3RF1Q7Z6J0 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SH3RF1Q7Z6J0 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
SH3RF1Q7Z6J0 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC5.43□□□□□ -1.54
SH3RF1Q7Z6J0 MAPK10-263ENST00000641052 4307 ntBASIC5.43□□□□□ -1.54
SH3RF1Q7Z6J0 RNU1-83P-201ENST00000363426 164 ntBASIC5.43□□□□□ -1.54
SH3RF1Q7Z6J0 Y_RNA.353-201ENST00000365440 108 ntBASIC5.43□□□□□ -1.54
SH3RF1Q7Z6J0 RNU6-1135P-201ENST00000411083 103 ntBASIC5.43□□□□□ -1.54
SH3RF1Q7Z6J0 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC5.43□□□□□ -1.54
SH3RF1Q7Z6J0 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.43□□□□□ -1.54
SH3RF1Q7Z6J0 GEMIN8P3-201ENST00000445417 720 ntBASIC5.43□□□□□ -1.54
SH3RF1Q7Z6J0 TDGF1P1-201ENST00000445734 527 ntBASIC5.43□□□□□ -1.54
SH3RF1Q7Z6J0 HIGD1AP2-201ENST00000446367 280 ntBASIC5.43□□□□□ -1.54
SH3RF1Q7Z6J0 RPS29P27-201ENST00000463711 170 ntBASIC5.43□□□□□ -1.54
SH3RF1Q7Z6J0 TOMM22P6-201ENST00000465035 409 ntBASIC5.43□□□□□ -1.54
SH3RF1Q7Z6J0 AC104164.2-201ENST00000496953 495 ntBASIC5.43□□□□□ -1.54
SH3RF1Q7Z6J0 UTP23-205ENST00000520733 369 ntTSL 3 BASIC5.43□□□□□ -1.54
SH3RF1Q7Z6J0 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC5.43□□□□□ -1.54
SH3RF1Q7Z6J0 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC5.43□□□□□ -1.54
SH3RF1Q7Z6J0 SNORD84-203ENST00000584275 78 ntBASIC5.43□□□□□ -1.54
SH3RF1Q7Z6J0 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC5.43□□□□□ -1.54
SH3RF1Q7Z6J0 AC108706.1-201ENST00000611053 297 ntBASIC5.43□□□□□ -1.54
SH3RF1Q7Z6J0 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC5.43□□□□□ -1.54
SH3RF1Q7Z6J0 MIR6716-201ENST00000613413 80 ntBASIC5.43□□□□□ -1.54
SH3RF1Q7Z6J0 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
SH3RF1Q7Z6J0 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SH3RF1Q7Z6J0 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC5.43□□□□□ -1.54
SH3RF1Q7Z6J0 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
SH3RF1Q7Z6J0 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SH3RF1Q7Z6J0 AC090971.4-201ENST00000560291 1800 ntBASIC5.43□□□□□ -1.54
SH3RF1Q7Z6J0 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.43□□□□□ -1.54
SH3RF1Q7Z6J0 CARF-208ENST00000428585 2513 ntTSL 2 BASIC5.42□□□□□ -1.54
SH3RF1Q7Z6J0 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC5.42□□□□□ -1.54
SH3RF1Q7Z6J0 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
SH3RF1Q7Z6J0 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
SH3RF1Q7Z6J0 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.42□□□□□ -1.54
SH3RF1Q7Z6J0 RNU5A-1-201ENST00000362698 116 ntBASIC5.42□□□□□ -1.54
SH3RF1Q7Z6J0 RNU6-21P-201ENST00000384710 107 ntBASIC5.42□□□□□ -1.54
SH3RF1Q7Z6J0 Y_RNA.569-201ENST00000384749 103 ntBASIC5.42□□□□□ -1.54
SH3RF1Q7Z6J0 MIR134-201ENST00000385258 73 ntBASIC5.42□□□□□ -1.54
SH3RF1Q7Z6J0 AL022722.2-201ENST00000402519 180 ntBASIC5.42□□□□□ -1.54
SH3RF1Q7Z6J0 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC5.42□□□□□ -1.54
SH3RF1Q7Z6J0 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC5.42□□□□□ -1.54
SH3RF1Q7Z6J0 AL035461.1-201ENST00000421490 332 ntBASIC5.42□□□□□ -1.54
SH3RF1Q7Z6J0 AL358453.1-201ENST00000422522 250 ntBASIC5.42□□□□□ -1.54
SH3RF1Q7Z6J0 MTATP6P4-201ENST00000427725 675 ntBASIC5.42□□□□□ -1.54
SH3RF1Q7Z6J0 CR769767.1-201ENST00000436337 346 ntBASIC5.42□□□□□ -1.54
SH3RF1Q7Z6J0 Z82188.1-201ENST00000436709 154 ntBASIC5.42□□□□□ -1.54
SH3RF1Q7Z6J0 AL590399.6-201ENST00000446396 307 ntBASIC5.42□□□□□ -1.54
SH3RF1Q7Z6J0 snoU13.3-201ENST00000459441 104 ntBASIC5.42□□□□□ -1.54
SH3RF1Q7Z6J0 AP001324.2-201ENST00000461163 319 ntBASIC5.42□□□□□ -1.54
SH3RF1Q7Z6J0 RPL23AP65-201ENST00000475608 468 ntBASIC5.42□□□□□ -1.54
SH3RF1Q7Z6J0 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC5.42□□□□□ -1.54
SH3RF1Q7Z6J0 AC093840.1-201ENST00000511599 336 ntBASIC5.42□□□□□ -1.54
SH3RF1Q7Z6J0 AC084851.1-201ENST00000529105 249 ntBASIC5.42□□□□□ -1.54
SH3RF1Q7Z6J0 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC5.42□□□□□ -1.54
SH3RF1Q7Z6J0 AC093249.4-201ENST00000564755 259 ntBASIC5.42□□□□□ -1.54
SH3RF1Q7Z6J0 SNORA74C-1-201ENST00000580726 201 ntBASIC5.42□□□□□ -1.54
SH3RF1Q7Z6J0 MIR3939-201ENST00000582614 106 ntBASIC5.42□□□□□ -1.54
SH3RF1Q7Z6J0 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC5.42□□□□□ -1.54
SH3RF1Q7Z6J0 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC5.42□□□□□ -1.54
SH3RF1Q7Z6J0 AC011944.2-201ENST00000624440 683 ntBASIC5.42□□□□□ -1.54
SH3RF1Q7Z6J0 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC5.42□□□□□ -1.54
SH3RF1Q7Z6J0 AC006484.1-201ENST00000435086 1884 ntBASIC5.42□□□□□ -1.54
SH3RF1Q7Z6J0 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SH3RF1Q7Z6J0 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
SH3RF1Q7Z6J0 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SH3RF1Q7Z6J0 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SH3RF1Q7Z6J0 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SH3RF1Q7Z6J0 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SH3RF1Q7Z6J0 AC083843.3-201ENST00000623679 2186 ntBASIC5.42□□□□□ -1.54
SH3RF1Q7Z6J0 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
SH3RF1Q7Z6J0 AC112198.2-201ENST00000426589 6996 ntBASIC5.42□□□□□ -1.54
SH3RF1Q7Z6J0 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SH3RF1Q7Z6J0 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SH3RF1Q7Z6J0 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
SH3RF1Q7Z6J0 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SH3RF1Q7Z6J0 AC008725.1-201ENST00000605123 2263 ntBASIC5.41□□□□□ -1.54
SH3RF1Q7Z6J0 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC5.41□□□□□ -1.54
SH3RF1Q7Z6J0 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms