Protein–RNA interactions for Protein: Q6ZMZ3

SYNE3, Nesprin-3, humanhuman

Predictions only

Length 975 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3Q6ZMZ3 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC3.56□□□□□ -1.84
SYNE3Q6ZMZ3 FGF7P6-202ENST00000451282 293 ntBASIC3.56□□□□□ -1.84
SYNE3Q6ZMZ3 RN7SL20P-201ENST00000488827 297 ntBASIC3.56□□□□□ -1.84
SYNE3Q6ZMZ3 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC3.56□□□□□ -1.84
SYNE3Q6ZMZ3 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.56□□□□□ -1.84
SYNE3Q6ZMZ3 AC104383.1-201ENST00000530297 370 ntBASIC3.56□□□□□ -1.84
SYNE3Q6ZMZ3 OR5B19P-201ENST00000531766 928 ntBASIC3.56□□□□□ -1.84
SYNE3Q6ZMZ3 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.56□□□□□ -1.84
SYNE3Q6ZMZ3 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.56□□□□□ -1.84
SYNE3Q6ZMZ3 AL157687.1-201ENST00000554853 619 ntBASIC3.56□□□□□ -1.84
SYNE3Q6ZMZ3 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.56□□□□□ -1.84
SYNE3Q6ZMZ3 AL390240.1-201ENST00000612950 384 ntBASIC3.56□□□□□ -1.84
SYNE3Q6ZMZ3 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.56□□□□□ -1.84
SYNE3Q6ZMZ3 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SYNE3Q6ZMZ3 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.56□□□□□ -1.84
SYNE3Q6ZMZ3 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
SYNE3Q6ZMZ3 AC103710.2-202ENST00000641454 2853 ntBASIC3.56□□□□□ -1.84
SYNE3Q6ZMZ3 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.56□□□□□ -1.84
SYNE3Q6ZMZ3 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SYNE3Q6ZMZ3 AC009487.2-201ENST00000420969 6821 ntBASIC3.55□□□□□ -1.84
SYNE3Q6ZMZ3 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SYNE3Q6ZMZ3 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SYNE3Q6ZMZ3 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.55□□□□□ -1.84
SYNE3Q6ZMZ3 RNU6-61P-201ENST00000365528 109 ntBASIC3.55□□□□□ -1.84
SYNE3Q6ZMZ3 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.55□□□□□ -1.84
SYNE3Q6ZMZ3 RNU6-641P-201ENST00000384006 107 ntBASIC3.55□□□□□ -1.84
SYNE3Q6ZMZ3 Y_RNA.481-201ENST00000384373 102 ntBASIC3.55□□□□□ -1.84
SYNE3Q6ZMZ3 RN7SKP220-201ENST00000410611 288 ntBASIC3.55□□□□□ -1.84
SYNE3Q6ZMZ3 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SYNE3Q6ZMZ3 OR51A5P-201ENST00000415429 942 ntBASIC3.55□□□□□ -1.84
SYNE3Q6ZMZ3 AL109913.1-201ENST00000421173 514 ntBASIC3.55□□□□□ -1.84
SYNE3Q6ZMZ3 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC3.55□□□□□ -1.84
SYNE3Q6ZMZ3 AC093106.2-201ENST00000428212 385 ntBASIC3.55□□□□□ -1.84
SYNE3Q6ZMZ3 AL590383.1-201ENST00000428602 75 ntBASIC3.55□□□□□ -1.84
SYNE3Q6ZMZ3 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.55□□□□□ -1.84
SYNE3Q6ZMZ3 USP9YP28-201ENST00000435142 589 ntBASIC3.55□□□□□ -1.84
SYNE3Q6ZMZ3 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC3.55□□□□□ -1.84
SYNE3Q6ZMZ3 NEFMP1-201ENST00000443423 1006 ntBASIC3.55□□□□□ -1.84
SYNE3Q6ZMZ3 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.55□□□□□ -1.84
SYNE3Q6ZMZ3 AC083798.1-201ENST00000472671 131 ntBASIC3.55□□□□□ -1.84
SYNE3Q6ZMZ3 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.55□□□□□ -1.84
SYNE3Q6ZMZ3 HMGN2P13-201ENST00000476476 274 ntBASIC3.55□□□□□ -1.84
SYNE3Q6ZMZ3 RPL31P60-201ENST00000478450 367 ntBASIC3.55□□□□□ -1.84
SYNE3Q6ZMZ3 AC009646.1-201ENST00000510455 318 ntBASIC3.55□□□□□ -1.84
SYNE3Q6ZMZ3 SNORA40.12-201ENST00000516329 111 ntBASIC3.55□□□□□ -1.84
SYNE3Q6ZMZ3 RN7SKP282-201ENST00000516824 299 ntBASIC3.55□□□□□ -1.84
SYNE3Q6ZMZ3 PSMA2P1-201ENST00000526365 646 ntBASIC3.55□□□□□ -1.84
SYNE3Q6ZMZ3 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC3.55□□□□□ -1.84
SYNE3Q6ZMZ3 OR4R1P-201ENST00000529879 463 ntBASIC3.55□□□□□ -1.84
SYNE3Q6ZMZ3 AP002404.1-201ENST00000532005 451 ntBASIC3.55□□□□□ -1.84
SYNE3Q6ZMZ3 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.55□□□□□ -1.84
SYNE3Q6ZMZ3 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC3.55□□□□□ -1.84
SYNE3Q6ZMZ3 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.55□□□□□ -1.84
SYNE3Q6ZMZ3 AK6P1-201ENST00000540219 478 ntBASIC3.55□□□□□ -1.84
SYNE3Q6ZMZ3 MIR4775-201ENST00000581168 75 ntBASIC3.55□□□□□ -1.84
SYNE3Q6ZMZ3 AC012493.2-201ENST00000595083 291 ntBASIC3.55□□□□□ -1.84
SYNE3Q6ZMZ3 AC012507.3-201ENST00000603556 477 ntBASIC3.55□□□□□ -1.84
SYNE3Q6ZMZ3 DPPA3P3-201ENST00000603842 430 ntBASIC3.55□□□□□ -1.84
SYNE3Q6ZMZ3 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.55□□□□□ -1.84
SYNE3Q6ZMZ3 AC139792.3-201ENST00000623525 224 ntBASIC3.55□□□□□ -1.84
SYNE3Q6ZMZ3 MIR3651-201ENST00000630427 90 ntBASIC3.55□□□□□ -1.84
SYNE3Q6ZMZ3 MTND1P37-201ENST00000636562 264 ntBASIC3.55□□□□□ -1.84
SYNE3Q6ZMZ3 MTND5P42-201ENST00000637720 498 ntBASIC3.55□□□□□ -1.84
SYNE3Q6ZMZ3 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
SYNE3Q6ZMZ3 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SYNE3Q6ZMZ3 MAPK10-266ENST00000641066 6555 ntBASIC3.54□□□□□ -1.84
SYNE3Q6ZMZ3 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SYNE3Q6ZMZ3 AC092435.3-201ENST00000565538 3654 ntBASIC3.54□□□□□ -1.84
SYNE3Q6ZMZ3 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SYNE3Q6ZMZ3 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
SYNE3Q6ZMZ3 RNA5SP374-201ENST00000362939 125 ntBASIC3.54□□□□□ -1.84
SYNE3Q6ZMZ3 RNA5SP387-201ENST00000364226 106 ntBASIC3.54□□□□□ -1.84
SYNE3Q6ZMZ3 RNU6-1322P-201ENST00000364309 107 ntBASIC3.54□□□□□ -1.84
SYNE3Q6ZMZ3 SNORA24.1-201ENST00000384401 135 ntBASIC3.54□□□□□ -1.84
SYNE3Q6ZMZ3 Y_RNA.554-201ENST00000384672 102 ntBASIC3.54□□□□□ -1.84
SYNE3Q6ZMZ3 RNU1-101P-201ENST00000391171 127 ntBASIC3.54□□□□□ -1.84
SYNE3Q6ZMZ3 RNU6-387P-201ENST00000411331 105 ntBASIC3.54□□□□□ -1.84
SYNE3Q6ZMZ3 NDUFB4P5-201ENST00000415445 361 ntBASIC3.54□□□□□ -1.84
SYNE3Q6ZMZ3 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.54□□□□□ -1.84
SYNE3Q6ZMZ3 AC009237.8-201ENST00000445492 379 ntBASIC3.54□□□□□ -1.84
SYNE3Q6ZMZ3 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SYNE3Q6ZMZ3 FDX1P2-201ENST00000450769 375 ntBASIC3.54□□□□□ -1.84
SYNE3Q6ZMZ3 RN7SL75P-201ENST00000461926 281 ntBASIC3.54□□□□□ -1.84
SYNE3Q6ZMZ3 AC026427.2-201ENST00000506228 536 ntBASIC3.54□□□□□ -1.84
SYNE3Q6ZMZ3 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.54□□□□□ -1.84
SYNE3Q6ZMZ3 TTC39CP1-201ENST00000512513 755 ntBASIC3.54□□□□□ -1.84
SYNE3Q6ZMZ3 AC008885.1-201ENST00000514930 301 ntBASIC3.54□□□□□ -1.84
SYNE3Q6ZMZ3 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.54□□□□□ -1.84
SYNE3Q6ZMZ3 RN7SKP43-201ENST00000516173 320 ntBASIC3.54□□□□□ -1.84
SYNE3Q6ZMZ3 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.54□□□□□ -1.84
SYNE3Q6ZMZ3 ATP5F1P5-201ENST00000526403 760 ntBASIC3.54□□□□□ -1.84
SYNE3Q6ZMZ3 AC104763.2-201ENST00000604179 382 ntBASIC3.54□□□□□ -1.84
SYNE3Q6ZMZ3 AL442067.2-201ENST00000614033 363 ntBASIC3.54□□□□□ -1.84
SYNE3Q6ZMZ3 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC3.54□□□□□ -1.84
SYNE3Q6ZMZ3 MIR8057-201ENST00000620957 69 ntBASIC3.54□□□□□ -1.84
SYNE3Q6ZMZ3 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.54□□□□□ -1.84
SYNE3Q6ZMZ3 SEPT14P19-203ENST00000633205 211 ntBASIC3.54□□□□□ -1.84
SYNE3Q6ZMZ3 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.54□□□□□ -1.84
SYNE3Q6ZMZ3 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
SYNE3Q6ZMZ3 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 119.2 ms