Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC5.06□□□□□ -1.6
FOXR1Q6PIV2 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC5.06□□□□□ -1.6
FOXR1Q6PIV2 TRAV37-201ENST00000553906 342 ntBASIC5.06□□□□□ -1.6
FOXR1Q6PIV2 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC5.06□□□□□ -1.6
FOXR1Q6PIV2 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC5.06□□□□□ -1.6
FOXR1Q6PIV2 RPL23AP78-201ENST00000599928 470 ntBASIC5.06□□□□□ -1.6
FOXR1Q6PIV2 SNORD113-5-201ENST00000607261 78 ntBASIC5.06□□□□□ -1.6
FOXR1Q6PIV2 MIR6130-201ENST00000619419 109 ntBASIC5.06□□□□□ -1.6
FOXR1Q6PIV2 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC5.06□□□□□ -1.6
FOXR1Q6PIV2 MIR6810-201ENST00000622701 70 ntBASIC5.06□□□□□ -1.6
FOXR1Q6PIV2 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC5.06□□□□□ -1.6
FOXR1Q6PIV2 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.06□□□□□ -1.6
FOXR1Q6PIV2 Z99571.1-201ENST00000636677 394 ntBASIC5.06□□□□□ -1.6
FOXR1Q6PIV2 INTS6P1-201ENST00000504674 2530 ntBASIC5.06□□□□□ -1.6
FOXR1Q6PIV2 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
FOXR1Q6PIV2 TLK1P1-201ENST00000456760 2440 ntBASIC5.06□□□□□ -1.6
FOXR1Q6PIV2 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC5.06□□□□□ -1.6
FOXR1Q6PIV2 AC092079.1-201ENST00000558620 1985 ntBASIC5.05□□□□□ -1.6
FOXR1Q6PIV2 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
FOXR1Q6PIV2 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
FOXR1Q6PIV2 AC016588.2-201ENST00000632484 3021 ntBASIC5.05□□□□□ -1.6
FOXR1Q6PIV2 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
FOXR1Q6PIV2 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
FOXR1Q6PIV2 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
FOXR1Q6PIV2 SNORA25.1-201ENST00000362326 128 ntBASIC5.05□□□□□ -1.6
FOXR1Q6PIV2 Y_RNA.446-201ENST00000384178 104 ntBASIC5.05□□□□□ -1.6
FOXR1Q6PIV2 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
FOXR1Q6PIV2 RPL21P40-201ENST00000428586 483 ntBASIC5.05□□□□□ -1.6
FOXR1Q6PIV2 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.05□□□□□ -1.6
FOXR1Q6PIV2 USP9YP7-201ENST00000436723 430 ntBASIC5.05□□□□□ -1.6
FOXR1Q6PIV2 IFNA11P-201ENST00000446352 526 ntBASIC5.05□□□□□ -1.6
FOXR1Q6PIV2 EEF1A1P1-201ENST00000447052 739 ntBASIC5.05□□□□□ -1.6
FOXR1Q6PIV2 AC009237.7-201ENST00000447357 229 ntBASIC5.05□□□□□ -1.6
FOXR1Q6PIV2 AL591623.2-201ENST00000449978 222 ntBASIC5.05□□□□□ -1.6
FOXR1Q6PIV2 USP9YP32-201ENST00000452432 430 ntBASIC5.05□□□□□ -1.6
FOXR1Q6PIV2 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
FOXR1Q6PIV2 RPS29P33-201ENST00000456717 146 ntBASIC5.05□□□□□ -1.6
FOXR1Q6PIV2 SNORD2.1-201ENST00000458762 69 ntBASIC5.05□□□□□ -1.6
FOXR1Q6PIV2 RPS29P27-201ENST00000463711 170 ntBASIC5.05□□□□□ -1.6
FOXR1Q6PIV2 RNU6-612P-201ENST00000516909 102 ntBASIC5.05□□□□□ -1.6
FOXR1Q6PIV2 MIR2355-201ENST00000517199 87 ntBASIC5.05□□□□□ -1.6
FOXR1Q6PIV2 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC5.05□□□□□ -1.6
FOXR1Q6PIV2 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC5.05□□□□□ -1.6
FOXR1Q6PIV2 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC5.05□□□□□ -1.6
FOXR1Q6PIV2 AC011447.4-201ENST00000587562 111 ntBASIC5.05□□□□□ -1.6
FOXR1Q6PIV2 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC5.05□□□□□ -1.6
FOXR1Q6PIV2 AC140113.4-201ENST00000622087 222 ntBASIC5.05□□□□□ -1.6
FOXR1Q6PIV2 AC090617.7-201ENST00000623952 126 ntBASIC5.05□□□□□ -1.6
FOXR1Q6PIV2 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.05□□□□□ -1.6
FOXR1Q6PIV2 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
FOXR1Q6PIV2 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
FOXR1Q6PIV2 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
FOXR1Q6PIV2 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
FOXR1Q6PIV2 AC026523.2-201ENST00000625039 7739 ntBASIC5.04□□□□□ -1.6
FOXR1Q6PIV2 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC5.04□□□□□ -1.6
FOXR1Q6PIV2 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
FOXR1Q6PIV2 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC5.04□□□□□ -1.6
FOXR1Q6PIV2 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
FOXR1Q6PIV2 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
FOXR1Q6PIV2 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
FOXR1Q6PIV2 Y_RNA.218-201ENST00000364218 104 ntBASIC5.04□□□□□ -1.6
FOXR1Q6PIV2 RNU6-318P-201ENST00000384283 103 ntBASIC5.04□□□□□ -1.6
FOXR1Q6PIV2 MIR569-201ENST00000385228 96 ntBASIC5.04□□□□□ -1.6
FOXR1Q6PIV2 AL357075.1-201ENST00000404107 726 ntBASIC5.04□□□□□ -1.6
FOXR1Q6PIV2 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC5.04□□□□□ -1.6
FOXR1Q6PIV2 FAR2P2-201ENST00000413041 594 ntBASIC5.04□□□□□ -1.6
FOXR1Q6PIV2 COX6B1P1-201ENST00000415962 213 ntBASIC5.04□□□□□ -1.6
FOXR1Q6PIV2 OOSP1P1-201ENST00000423265 274 ntBASIC5.04□□□□□ -1.6
FOXR1Q6PIV2 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC5.04□□□□□ -1.6
FOXR1Q6PIV2 AL512844.2-201ENST00000433990 593 ntBASIC5.04□□□□□ -1.6
FOXR1Q6PIV2 AL589765.3-201ENST00000446084 462 ntBASIC5.04□□□□□ -1.6
FOXR1Q6PIV2 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC5.04□□□□□ -1.6
FOXR1Q6PIV2 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC5.04□□□□□ -1.6
FOXR1Q6PIV2 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC5.04□□□□□ -1.6
FOXR1Q6PIV2 RNU7-175P-201ENST00000515915 61 ntBASIC5.04□□□□□ -1.6
FOXR1Q6PIV2 AC090617.3-201ENST00000573670 475 ntBASIC5.04□□□□□ -1.6
FOXR1Q6PIV2 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
FOXR1Q6PIV2 PRO1804-201ENST00000623780 2050 ntBASIC5.04□□□□□ -1.6
FOXR1Q6PIV2 DHX9P1-201ENST00000436565 3076 ntBASIC5.04□□□□□ -1.6
FOXR1Q6PIV2 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC5.04□□□□□ -1.6
FOXR1Q6PIV2 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
FOXR1Q6PIV2 IQCB2P-201ENST00000401788 1633 ntBASIC5.04□□□□□ -1.6
FOXR1Q6PIV2 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
FOXR1Q6PIV2 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.04□□□□□ -1.6
FOXR1Q6PIV2 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC5.03□□□□□ -1.6
FOXR1Q6PIV2 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
FOXR1Q6PIV2 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
FOXR1Q6PIV2 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.03□□□□□ -1.6
FOXR1Q6PIV2 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
FOXR1Q6PIV2 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.03□□□□□ -1.6
FOXR1Q6PIV2 MRPL48P1-201ENST00000445390 636 ntBASIC5.03□□□□□ -1.6
FOXR1Q6PIV2 AC010469.1-201ENST00000463864 576 ntBASIC5.03□□□□□ -1.6
FOXR1Q6PIV2 AC097462.2-201ENST00000504623 481 ntBASIC5.03□□□□□ -1.6
FOXR1Q6PIV2 PDCD5P2-201ENST00000507570 312 ntBASIC5.03□□□□□ -1.6
FOXR1Q6PIV2 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC5.03□□□□□ -1.6
FOXR1Q6PIV2 AC112693.2-201ENST00000556538 232 ntBASIC5.03□□□□□ -1.6
FOXR1Q6PIV2 AL359881.1-201ENST00000602916 267 ntBASIC5.03□□□□□ -1.6
FOXR1Q6PIV2 AC005828.6-201ENST00000606610 232 ntBASIC5.03□□□□□ -1.6
FOXR1Q6PIV2 AC015813.4-201ENST00000610469 179 ntBASIC5.03□□□□□ -1.6
FOXR1Q6PIV2 MIR378J-201ENST00000611988 109 ntBASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms