Protein–RNA interactions for Protein: Q6PEY1

TMEM88, Transmembrane protein 88, humanhuman

Predictions only

Length 159 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88Q6PEY1 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
TMEM88Q6PEY1 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
TMEM88Q6PEY1 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.2□□□□□ -1.9
TMEM88Q6PEY1 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
TMEM88Q6PEY1 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
TMEM88Q6PEY1 Y_RNA.324-201ENST00000365165 102 ntBASIC3.2□□□□□ -1.9
TMEM88Q6PEY1 RNU6-166P-201ENST00000384371 107 ntBASIC3.2□□□□□ -1.9
TMEM88Q6PEY1 MIR10A-201ENST00000385043 110 ntBASIC3.2□□□□□ -1.9
TMEM88Q6PEY1 RNU6-1077P-201ENST00000410506 102 ntBASIC3.2□□□□□ -1.9
TMEM88Q6PEY1 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.2□□□□□ -1.9
TMEM88Q6PEY1 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3.2□□□□□ -1.9
TMEM88Q6PEY1 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC3.2□□□□□ -1.9
TMEM88Q6PEY1 RPL17P36-201ENST00000420302 549 ntBASIC3.2□□□□□ -1.9
TMEM88Q6PEY1 HMGN2P30-201ENST00000423237 256 ntBASIC3.2□□□□□ -1.9
TMEM88Q6PEY1 RPL18P10-201ENST00000425606 538 ntBASIC3.2□□□□□ -1.9
TMEM88Q6PEY1 AC098614.2-201ENST00000426040 255 ntBASIC3.2□□□□□ -1.9
TMEM88Q6PEY1 HMGB1P9-201ENST00000429856 646 ntBASIC3.2□□□□□ -1.9
TMEM88Q6PEY1 AC007389.2-201ENST00000434630 306 ntBASIC3.2□□□□□ -1.9
TMEM88Q6PEY1 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC3.2□□□□□ -1.9
TMEM88Q6PEY1 MTND4LP16-201ENST00000440828 295 ntBASIC3.2□□□□□ -1.9
TMEM88Q6PEY1 AL078601.1-201ENST00000444542 271 ntBASIC3.2□□□□□ -1.9
TMEM88Q6PEY1 MTND1P11-201ENST00000456661 876 ntBASIC3.2□□□□□ -1.9
TMEM88Q6PEY1 snoU109.2-201ENST00000459316 135 ntBASIC3.2□□□□□ -1.9
TMEM88Q6PEY1 RPL21P126-201ENST00000470049 478 ntBASIC3.2□□□□□ -1.9
TMEM88Q6PEY1 TRBVA-201ENST00000498804 316 ntBASIC3.2□□□□□ -1.9
TMEM88Q6PEY1 AC093840.1-201ENST00000511599 336 ntBASIC3.2□□□□□ -1.9
TMEM88Q6PEY1 RNU6-864P-201ENST00000516256 108 ntBASIC3.2□□□□□ -1.9
TMEM88Q6PEY1 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.2□□□□□ -1.9
TMEM88Q6PEY1 RNU6-1332P-201ENST00000516666 104 ntBASIC3.2□□□□□ -1.9
TMEM88Q6PEY1 RNU6-1088P-201ENST00000516850 104 ntBASIC3.2□□□□□ -1.9
TMEM88Q6PEY1 AC093331.1-201ENST00000521474 169 ntBASIC3.2□□□□□ -1.9
TMEM88Q6PEY1 AP000867.2-201ENST00000532468 320 ntBASIC3.2□□□□□ -1.9
TMEM88Q6PEY1 RAB11AP2-201ENST00000545905 639 ntBASIC3.2□□□□□ -1.9
TMEM88Q6PEY1 HIGD1AP1-201ENST00000550979 275 ntBASIC3.2□□□□□ -1.9
TMEM88Q6PEY1 AC037471.2-201ENST00000564941 598 ntBASIC3.2□□□□□ -1.9
TMEM88Q6PEY1 AC084783.1-201ENST00000565846 910 ntBASIC3.2□□□□□ -1.9
TMEM88Q6PEY1 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC3.2□□□□□ -1.9
TMEM88Q6PEY1 MIR3672-201ENST00000584290 82 ntBASIC3.2□□□□□ -1.9
TMEM88Q6PEY1 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.2□□□□□ -1.9
TMEM88Q6PEY1 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC3.2□□□□□ -1.9
TMEM88Q6PEY1 TPTEP1-208ENST00000636884 213 ntBASIC3.2□□□□□ -1.9
TMEM88Q6PEY1 AC112487.2-201ENST00000637950 304 ntBASIC3.2□□□□□ -1.9
TMEM88Q6PEY1 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC3.2□□□□□ -1.9
TMEM88Q6PEY1 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.2□□□□□ -1.9
TMEM88Q6PEY1 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
TMEM88Q6PEY1 AC110774.1-201ENST00000623567 2018 ntBASIC3.2□□□□□ -1.9
TMEM88Q6PEY1 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
TMEM88Q6PEY1 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
TMEM88Q6PEY1 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
TMEM88Q6PEY1 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
TMEM88Q6PEY1 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
TMEM88Q6PEY1 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
TMEM88Q6PEY1 Y_RNA.166-201ENST00000363730 102 ntBASIC3.19□□□□□ -1.9
TMEM88Q6PEY1 SNORD14B-201ENST00000364533 90 ntBASIC3.19□□□□□ -1.9
TMEM88Q6PEY1 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC3.19□□□□□ -1.9
TMEM88Q6PEY1 Y_RNA.480-201ENST00000384364 102 ntBASIC3.19□□□□□ -1.9
TMEM88Q6PEY1 EI24P2-201ENST00000397776 1076 ntBASIC3.19□□□□□ -1.9
TMEM88Q6PEY1 SDHCP2-201ENST00000398565 501 ntBASIC3.19□□□□□ -1.9
TMEM88Q6PEY1 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.19□□□□□ -1.9
TMEM88Q6PEY1 RPL7AP25-201ENST00000423357 805 ntBASIC3.19□□□□□ -1.9
TMEM88Q6PEY1 AC011998.1-201ENST00000433403 117 ntBASIC3.19□□□□□ -1.9
TMEM88Q6PEY1 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.19□□□□□ -1.9
TMEM88Q6PEY1 HIGD1AP11-201ENST00000438361 280 ntBASIC3.19□□□□□ -1.9
TMEM88Q6PEY1 BRK1P2-201ENST00000442875 223 ntBASIC3.19□□□□□ -1.9
TMEM88Q6PEY1 NUTF2P3-201ENST00000448540 384 ntBASIC3.19□□□□□ -1.9
TMEM88Q6PEY1 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC3.19□□□□□ -1.9
TMEM88Q6PEY1 AC011005.2-201ENST00000487324 359 ntBASIC3.19□□□□□ -1.9
TMEM88Q6PEY1 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC3.19□□□□□ -1.9
TMEM88Q6PEY1 Y_RNA.682-201ENST00000516457 100 ntBASIC3.19□□□□□ -1.9
TMEM88Q6PEY1 RNU6-256P-201ENST00000516747 97 ntBASIC3.19□□□□□ -1.9
TMEM88Q6PEY1 SNORD59.2-201ENST00000516873 68 ntBASIC3.19□□□□□ -1.9
TMEM88Q6PEY1 RNU6-711P-201ENST00000517255 106 ntBASIC3.19□□□□□ -1.9
TMEM88Q6PEY1 AC087369.1-201ENST00000520775 996 ntBASIC3.19□□□□□ -1.9
TMEM88Q6PEY1 IGHV3-76-201ENST00000522465 295 ntBASIC3.19□□□□□ -1.9
TMEM88Q6PEY1 CYCSP27-201ENST00000527643 293 ntBASIC3.19□□□□□ -1.9
TMEM88Q6PEY1 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.19□□□□□ -1.9
TMEM88Q6PEY1 AC008011.1-201ENST00000545989 227 ntBASIC3.19□□□□□ -1.9
TMEM88Q6PEY1 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
TMEM88Q6PEY1 AC025423.5-201ENST00000550230 219 ntBASIC3.19□□□□□ -1.9
TMEM88Q6PEY1 MIR4738-201ENST00000579134 87 ntBASIC3.19□□□□□ -1.9
TMEM88Q6PEY1 FGF7P1-201ENST00000582820 288 ntBASIC3.19□□□□□ -1.9
TMEM88Q6PEY1 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC3.19□□□□□ -1.9
TMEM88Q6PEY1 AC123912.5-201ENST00000605470 343 ntBASIC3.19□□□□□ -1.9
TMEM88Q6PEY1 RNU6-85P-201ENST00000605989 107 ntBASIC3.19□□□□□ -1.9
TMEM88Q6PEY1 uc_338.5-201ENST00000611839 155 ntBASIC3.19□□□□□ -1.9
TMEM88Q6PEY1 MIR6798-201ENST00000612887 67 ntBASIC3.19□□□□□ -1.9
TMEM88Q6PEY1 FAM157A-202ENST00000615155 405 ntBASIC3.19□□□□□ -1.9
TMEM88Q6PEY1 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
TMEM88Q6PEY1 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
TMEM88Q6PEY1 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC3.19□□□□□ -1.9
TMEM88Q6PEY1 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
TMEM88Q6PEY1 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.19□□□□□ -1.9
TMEM88Q6PEY1 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.18□□□□□ -1.9
TMEM88Q6PEY1 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.18□□□□□ -1.9
TMEM88Q6PEY1 RNU6-778P-201ENST00000363269 103 ntBASIC3.18□□□□□ -1.9
TMEM88Q6PEY1 RNU1-132P-201ENST00000364300 164 ntBASIC3.18□□□□□ -1.9
TMEM88Q6PEY1 Y_RNA.263-201ENST00000364659 114 ntBASIC3.18□□□□□ -1.9
TMEM88Q6PEY1 Y_RNA.301-201ENST00000364990 103 ntBASIC3.18□□□□□ -1.9
TMEM88Q6PEY1 RNU1-73P-201ENST00000383971 164 ntBASIC3.18□□□□□ -1.9
TMEM88Q6PEY1 MIR659-201ENST00000384963 97 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms