Protein–RNA interactions for Protein: Q6ICC9

RTL6, Retrotransposon Gag-like protein 6, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL6Q6ICC9 AC008088.1-201ENST00000580993 280 ntBASIC2.57□□□□□ -2
RTL6Q6ICC9 Z94722.1-201ENST00000604328 474 ntBASIC2.57□□□□□ -2
RTL6Q6ICC9 AC121247.2-201ENST00000604776 136 ntBASIC2.57□□□□□ -2
RTL6Q6ICC9 AL035413.2-201ENST00000604801 525 ntBASIC2.57□□□□□ -2
RTL6Q6ICC9 OR2AS2P-201ENST00000606902 342 ntBASIC2.57□□□□□ -2
RTL6Q6ICC9 AP002360.4-201ENST00000606980 481 ntBASIC2.57□□□□□ -2
RTL6Q6ICC9 AC069234.5-201ENST00000611056 416 ntBASIC2.57□□□□□ -2
RTL6Q6ICC9 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.57□□□□□ -2
RTL6Q6ICC9 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.57□□□□□ -2
RTL6Q6ICC9 ZNF519P1-201ENST00000449011 1626 ntBASIC2.57□□□□□ -2
RTL6Q6ICC9 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.57□□□□□ -2
RTL6Q6ICC9 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
RTL6Q6ICC9 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
RTL6Q6ICC9 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
RTL6Q6ICC9 U8.3-201ENST00000363321 132 ntBASIC2.56□□□□□ -2
RTL6Q6ICC9 U3.4-201ENST00000363352 213 ntBASIC2.56□□□□□ -2
RTL6Q6ICC9 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.56□□□□□ -2
RTL6Q6ICC9 RNU2-49P-201ENST00000410666 184 ntBASIC2.56□□□□□ -2
RTL6Q6ICC9 RNA5SP184-201ENST00000411071 108 ntBASIC2.56□□□□□ -2
RTL6Q6ICC9 RPL26P27-201ENST00000414397 437 ntBASIC2.56□□□□□ -2
RTL6Q6ICC9 AC092809.3-201ENST00000415453 231 ntBASIC2.56□□□□□ -2
RTL6Q6ICC9 NUP35P1-201ENST00000422734 947 ntBASIC2.56□□□□□ -2
RTL6Q6ICC9 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC2.56□□□□□ -2
RTL6Q6ICC9 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC2.56□□□□□ -2
RTL6Q6ICC9 AL022238.1-201ENST00000442557 355 ntBASIC2.56□□□□□ -2
RTL6Q6ICC9 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.56□□□□□ -2
RTL6Q6ICC9 RNU6-953P-201ENST00000459154 107 ntBASIC2.56□□□□□ -2
RTL6Q6ICC9 AC007182.2-201ENST00000489251 402 ntBASIC2.56□□□□□ -2
RTL6Q6ICC9 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.56□□□□□ -2
RTL6Q6ICC9 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.56□□□□□ -2
RTL6Q6ICC9 AC113155.1-201ENST00000511141 769 ntBASIC2.56□□□□□ -2
RTL6Q6ICC9 MRPS36P2-201ENST00000512569 299 ntBASIC2.56□□□□□ -2
RTL6Q6ICC9 RNU6-703P-201ENST00000516946 107 ntBASIC2.56□□□□□ -2
RTL6Q6ICC9 HMGB1P41-201ENST00000520234 440 ntBASIC2.56□□□□□ -2
RTL6Q6ICC9 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC2.56□□□□□ -2
RTL6Q6ICC9 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC2.56□□□□□ -2
RTL6Q6ICC9 MTCO3P13-201ENST00000577757 781 ntBASIC2.56□□□□□ -2
RTL6Q6ICC9 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC2.56□□□□□ -2
RTL6Q6ICC9 AC068276.1-201ENST00000605793 379 ntBASIC2.56□□□□□ -2
RTL6Q6ICC9 AC108479.2-201ENST00000617314 601 ntBASIC2.56□□□□□ -2
RTL6Q6ICC9 LRRC77P-213ENST00000637727 880 ntBASIC2.56□□□□□ -2
RTL6Q6ICC9 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
RTL6Q6ICC9 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
RTL6Q6ICC9 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.56□□□□□ -2
RTL6Q6ICC9 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.56□□□□□ -2
RTL6Q6ICC9 AC110491.1-201ENST00000562191 2010 ntBASIC2.56□□□□□ -2
RTL6Q6ICC9 AL355596.1-201ENST00000565399 3996 ntBASIC2.55□□□□□ -2
RTL6Q6ICC9 FGF7P2-201ENST00000332473 296 ntBASIC2.55□□□□□ -2
RTL6Q6ICC9 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
RTL6Q6ICC9 Y_RNA.534-201ENST00000384599 112 ntBASIC2.55□□□□□ -2
RTL6Q6ICC9 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.55□□□□□ -2
RTL6Q6ICC9 ELOCP4-201ENST00000420090 333 ntBASIC2.55□□□□□ -2
RTL6Q6ICC9 AC009487.2-201ENST00000420969 6821 ntBASIC2.55□□□□□ -2
RTL6Q6ICC9 AC098614.2-201ENST00000426040 255 ntBASIC2.55□□□□□ -2
RTL6Q6ICC9 HMGB1P9-201ENST00000429856 646 ntBASIC2.55□□□□□ -2
RTL6Q6ICC9 AC104850.1-201ENST00000435940 476 ntBASIC2.55□□□□□ -2
RTL6Q6ICC9 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.55□□□□□ -2
RTL6Q6ICC9 AC009296.1-201ENST00000443146 155 ntBASIC2.55□□□□□ -2
RTL6Q6ICC9 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.55□□□□□ -2
RTL6Q6ICC9 RPS15AP27-201ENST00000449183 343 ntBASIC2.55□□□□□ -2
RTL6Q6ICC9 NIPA2P5-201ENST00000452282 464 ntBASIC2.55□□□□□ -2
RTL6Q6ICC9 AL109933.2-201ENST00000452651 260 ntBASIC2.55□□□□□ -2
RTL6Q6ICC9 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC2.55□□□□□ -2
RTL6Q6ICC9 AC126182.1-201ENST00000478134 357 ntBASIC2.55□□□□□ -2
RTL6Q6ICC9 RN7SL499P-201ENST00000481141 276 ntBASIC2.55□□□□□ -2
RTL6Q6ICC9 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC2.55□□□□□ -2
RTL6Q6ICC9 AC022616.3-201ENST00000523940 148 ntBASIC2.55□□□□□ -2
RTL6Q6ICC9 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC2.55□□□□□ -2
RTL6Q6ICC9 OR5B19P-201ENST00000531766 928 ntBASIC2.55□□□□□ -2
RTL6Q6ICC9 VBP1-203ENST00000535916 944 ntTSL 2 BASIC2.55□□□□□ -2
RTL6Q6ICC9 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.55□□□□□ -2
RTL6Q6ICC9 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.55□□□□□ -2
RTL6Q6ICC9 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.55□□□□□ -2
RTL6Q6ICC9 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC2.55□□□□□ -2
RTL6Q6ICC9 AC005498.1-201ENST00000592125 465 ntBASIC2.55□□□□□ -2
RTL6Q6ICC9 RPL23AP78-201ENST00000599928 470 ntBASIC2.55□□□□□ -2
RTL6Q6ICC9 Z99497.2-201ENST00000603634 310 ntBASIC2.55□□□□□ -2
RTL6Q6ICC9 AL355877.2-201ENST00000603670 358 ntBASIC2.55□□□□□ -2
RTL6Q6ICC9 BNIP3P9-201ENST00000603714 553 ntBASIC2.55□□□□□ -2
RTL6Q6ICC9 AC025811.1-201ENST00000604312 472 ntBASIC2.55□□□□□ -2
RTL6Q6ICC9 AC022893.3-201ENST00000607665 437 ntBASIC2.55□□□□□ -2
RTL6Q6ICC9 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.55□□□□□ -2
RTL6Q6ICC9 AC013562.2-201ENST00000611632 603 ntBASIC2.55□□□□□ -2
RTL6Q6ICC9 AC130324.3-201ENST00000614165 542 ntBASIC2.55□□□□□ -2
RTL6Q6ICC9 AC008250.2-201ENST00000615261 205 ntBASIC2.55□□□□□ -2
RTL6Q6ICC9 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.55□□□□□ -2
RTL6Q6ICC9 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC2.55□□□□□ -2
RTL6Q6ICC9 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.55□□□□□ -2
RTL6Q6ICC9 AC090617.7-201ENST00000623952 126 ntBASIC2.55□□□□□ -2
RTL6Q6ICC9 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.55□□□□□ -2
RTL6Q6ICC9 Z99571.1-201ENST00000636677 394 ntBASIC2.55□□□□□ -2
RTL6Q6ICC9 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.54□□□□□ -2
RTL6Q6ICC9 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.54□□□□□ -2
RTL6Q6ICC9 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.54□□□□□ -2
RTL6Q6ICC9 RNU6-297P-201ENST00000384636 107 ntBASIC2.54□□□□□ -2
RTL6Q6ICC9 RNY3P10-201ENST00000384764 102 ntBASIC2.54□□□□□ -2
RTL6Q6ICC9 SNORA40.3-201ENST00000390964 122 ntBASIC2.54□□□□□ -2
RTL6Q6ICC9 RPS3AP36-201ENST00000398190 775 ntBASIC2.54□□□□□ -2
RTL6Q6ICC9 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.54□□□□□ -2
RTL6Q6ICC9 RPL7P10-201ENST00000417407 739 ntBASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms