Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 Y_RNA.644-201ENST00000459006 113 ntBASIC5.44□□□□□ -1.54
RNF20Q5VTR2 RN7SL826P-201ENST00000479724 288 ntBASIC5.44□□□□□ -1.54
RNF20Q5VTR2 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC5.44□□□□□ -1.54
RNF20Q5VTR2 AL359273.1-201ENST00000510918 627 ntBASIC5.44□□□□□ -1.54
RNF20Q5VTR2 OR7H2P-201ENST00000513483 306 ntBASIC5.44□□□□□ -1.54
RNF20Q5VTR2 Y_RNA.674-201ENST00000516362 113 ntBASIC5.44□□□□□ -1.54
RNF20Q5VTR2 AC091144.1-201ENST00000519573 138 ntBASIC5.44□□□□□ -1.54
RNF20Q5VTR2 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC5.44□□□□□ -1.54
RNF20Q5VTR2 AL442163.3-201ENST00000554110 156 ntBASIC5.44□□□□□ -1.54
RNF20Q5VTR2 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC5.44□□□□□ -1.54
RNF20Q5VTR2 AC010620.2-201ENST00000600135 313 ntBASIC5.44□□□□□ -1.54
RNF20Q5VTR2 AC098826.3-201ENST00000603823 466 ntBASIC5.44□□□□□ -1.54
RNF20Q5VTR2 AC006077.1-201ENST00000604746 343 ntBASIC5.44□□□□□ -1.54
RNF20Q5VTR2 FAM25E-202ENST00000608562 189 ntBASIC5.44□□□□□ -1.54
RNF20Q5VTR2 AC009318.2-201ENST00000610917 651 ntBASIC5.44□□□□□ -1.54
RNF20Q5VTR2 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC5.44□□□□□ -1.54
RNF20Q5VTR2 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
RNF20Q5VTR2 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
RNF20Q5VTR2 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC5.44□□□□□ -1.54
RNF20Q5VTR2 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
RNF20Q5VTR2 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
RNF20Q5VTR2 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
RNF20Q5VTR2 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC5.43□□□□□ -1.54
RNF20Q5VTR2 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC5.43□□□□□ -1.54
RNF20Q5VTR2 RNA5SP52-201ENST00000362448 134 ntBASIC5.43□□□□□ -1.54
RNF20Q5VTR2 Y_RNA.83-201ENST00000363005 113 ntBASIC5.43□□□□□ -1.54
RNF20Q5VTR2 RNU6-837P-201ENST00000391056 108 ntBASIC5.43□□□□□ -1.54
RNF20Q5VTR2 MRPL35P1-201ENST00000404272 572 ntBASIC5.43□□□□□ -1.54
RNF20Q5VTR2 AL513331.1-201ENST00000411908 397 ntBASIC5.43□□□□□ -1.54
RNF20Q5VTR2 AL592148.1-201ENST00000413568 445 ntBASIC5.43□□□□□ -1.54
RNF20Q5VTR2 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC5.43□□□□□ -1.54
RNF20Q5VTR2 AL590762.4-201ENST00000425885 253 ntBASIC5.43□□□□□ -1.54
RNF20Q5VTR2 RN7SL41P-201ENST00000476144 297 ntBASIC5.43□□□□□ -1.54
RNF20Q5VTR2 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC5.43□□□□□ -1.54
RNF20Q5VTR2 AC022868.1-201ENST00000517767 391 ntBASIC5.43□□□□□ -1.54
RNF20Q5VTR2 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC5.43□□□□□ -1.54
RNF20Q5VTR2 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC5.43□□□□□ -1.54
RNF20Q5VTR2 BPIFA4P-203ENST00000603168 689 ntBASIC5.43□□□□□ -1.54
RNF20Q5VTR2 AC091979.2-201ENST00000607514 214 ntBASIC5.43□□□□□ -1.54
RNF20Q5VTR2 AL049539.1-201ENST00000611964 459 ntBASIC5.43□□□□□ -1.54
RNF20Q5VTR2 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC5.43□□□□□ -1.54
RNF20Q5VTR2 AL353748.2-201ENST00000622148 471 ntBASIC5.43□□□□□ -1.54
RNF20Q5VTR2 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
RNF20Q5VTR2 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC5.43□□□□□ -1.54
RNF20Q5VTR2 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
RNF20Q5VTR2 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
RNF20Q5VTR2 OR14L1P-202ENST00000641545 3009 ntBASIC5.42□□□□□ -1.54
RNF20Q5VTR2 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
RNF20Q5VTR2 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
RNF20Q5VTR2 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.42□□□□□ -1.54
RNF20Q5VTR2 FAM91A3P-201ENST00000456826 2544 ntBASIC5.42□□□□□ -1.54
RNF20Q5VTR2 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
RNF20Q5VTR2 LINC02555-201ENST00000563933 1951 ntBASIC5.42□□□□□ -1.54
RNF20Q5VTR2 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC5.42□□□□□ -1.54
RNF20Q5VTR2 AC021146.4-201ENST00000309229 279 ntBASIC5.42□□□□□ -1.54
RNF20Q5VTR2 SNORD81.1-201ENST00000363064 77 ntBASIC5.42□□□□□ -1.54
RNF20Q5VTR2 U3.6-201ENST00000363622 211 ntBASIC5.42□□□□□ -1.54
RNF20Q5VTR2 Y_RNA.464-201ENST00000384282 110 ntBASIC5.42□□□□□ -1.54
RNF20Q5VTR2 Y_RNA.541-201ENST00000384640 113 ntBASIC5.42□□□□□ -1.54
RNF20Q5VTR2 RNU6-493P-201ENST00000391321 108 ntBASIC5.42□□□□□ -1.54
RNF20Q5VTR2 RPL21P75-201ENST00000396599 483 ntBASIC5.42□□□□□ -1.54
RNF20Q5VTR2 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC5.42□□□□□ -1.54
RNF20Q5VTR2 MIR190B-201ENST00000401119 79 ntBASIC5.42□□□□□ -1.54
RNF20Q5VTR2 RPL21P28-201ENST00000401418 483 ntBASIC5.42□□□□□ -1.54
RNF20Q5VTR2 HDGFP1-201ENST00000405943 252 ntBASIC5.42□□□□□ -1.54
RNF20Q5VTR2 MIR548I2-201ENST00000408348 149 ntBASIC5.42□□□□□ -1.54
RNF20Q5VTR2 Y_RNA.602-201ENST00000410535 92 ntBASIC5.42□□□□□ -1.54
RNF20Q5VTR2 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC5.42□□□□□ -1.54
RNF20Q5VTR2 AL158156.1-201ENST00000422509 473 ntBASIC5.42□□□□□ -1.54
RNF20Q5VTR2 AL590556.1-201ENST00000423231 483 ntBASIC5.42□□□□□ -1.54
RNF20Q5VTR2 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
RNF20Q5VTR2 RPL21P11-201ENST00000461458 483 ntBASIC5.42□□□□□ -1.54
RNF20Q5VTR2 RPL21P39-201ENST00000463605 483 ntBASIC5.42□□□□□ -1.54
RNF20Q5VTR2 AC132942.1-201ENST00000486753 483 ntBASIC5.42□□□□□ -1.54
RNF20Q5VTR2 AL049874.1-201ENST00000489560 388 ntBASIC5.42□□□□□ -1.54
RNF20Q5VTR2 IGLV2-34-201ENST00000490007 283 ntBASIC5.42□□□□□ -1.54
RNF20Q5VTR2 AC093591.1-201ENST00000491435 481 ntBASIC5.42□□□□□ -1.54
RNF20Q5VTR2 RPL21P16-201ENST00000495531 483 ntBASIC5.42□□□□□ -1.54
RNF20Q5VTR2 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC5.42□□□□□ -1.54
RNF20Q5VTR2 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC5.42□□□□□ -1.54
RNF20Q5VTR2 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC5.42□□□□□ -1.54
RNF20Q5VTR2 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC5.42□□□□□ -1.54
RNF20Q5VTR2 MIR4643-201ENST00000577473 78 ntBASIC5.42□□□□□ -1.54
RNF20Q5VTR2 AC002545.1-201ENST00000592511 181 ntBASIC5.42□□□□□ -1.54
RNF20Q5VTR2 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC5.42□□□□□ -1.54
RNF20Q5VTR2 AC107294.1-201ENST00000609524 467 ntBASIC5.42□□□□□ -1.54
RNF20Q5VTR2 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC5.42□□□□□ -1.54
RNF20Q5VTR2 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
RNF20Q5VTR2 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
RNF20Q5VTR2 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
RNF20Q5VTR2 AC005332.5-201ENST00000591222 2919 ntBASIC5.42□□□□□ -1.54
RNF20Q5VTR2 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
RNF20Q5VTR2 LINC01109-201ENST00000603837 3081 ntBASIC5.42□□□□□ -1.54
RNF20Q5VTR2 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
RNF20Q5VTR2 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC5.41□□□□□ -1.54
RNF20Q5VTR2 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC5.41□□□□□ -1.54
RNF20Q5VTR2 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC5.41□□□□□ -1.54
RNF20Q5VTR2 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
RNF20Q5VTR2 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC5.41□□□□□ -1.54
RNF20Q5VTR2 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 129.2 ms