Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 MTCO3P24-201ENST00000572729 782 ntBASIC3.52□□□□□ -1.85
CCDC38Q502W7 AC005951.1-201ENST00000576706 485 ntBASIC3.52□□□□□ -1.85
CCDC38Q502W7 CR381653.2-201ENST00000624041 768 ntBASIC3.52□□□□□ -1.85
CCDC38Q502W7 AC032011.1-201ENST00000611703 1549 ntBASIC3.52□□□□□ -1.85
CCDC38Q502W7 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.51□□□□□ -1.85
CCDC38Q502W7 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CCDC38Q502W7 NACAP2-201ENST00000318548 624 ntBASIC3.51□□□□□ -1.85
CCDC38Q502W7 Y_RNA.33-201ENST00000362591 102 ntBASIC3.51□□□□□ -1.85
CCDC38Q502W7 SNORD56.3-201ENST00000363507 71 ntBASIC3.51□□□□□ -1.85
CCDC38Q502W7 RNU6-799P-201ENST00000363567 107 ntBASIC3.51□□□□□ -1.85
CCDC38Q502W7 SNORA51.4-201ENST00000364993 124 ntBASIC3.51□□□□□ -1.85
CCDC38Q502W7 SNORA5A-201ENST00000384111 134 ntBASIC3.51□□□□□ -1.85
CCDC38Q502W7 MIR181A1-201ENST00000385026 110 ntBASIC3.51□□□□□ -1.85
CCDC38Q502W7 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
CCDC38Q502W7 RNU2-29P-201ENST00000410423 189 ntBASIC3.51□□□□□ -1.85
CCDC38Q502W7 RAB9AP3-201ENST00000412737 573 ntBASIC3.51□□□□□ -1.85
CCDC38Q502W7 MTCO1P21-201ENST00000416634 589 ntBASIC3.51□□□□□ -1.85
CCDC38Q502W7 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC3.51□□□□□ -1.85
CCDC38Q502W7 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.51□□□□□ -1.85
CCDC38Q502W7 AC244505.4-201ENST00000434905 287 ntBASIC3.51□□□□□ -1.85
CCDC38Q502W7 SSXP5-201ENST00000443473 287 ntBASIC3.51□□□□□ -1.85
CCDC38Q502W7 AC104058.1-201ENST00000448028 297 ntBASIC3.51□□□□□ -1.85
CCDC38Q502W7 RAB9AP1-201ENST00000449393 573 ntBASIC3.51□□□□□ -1.85
CCDC38Q502W7 AC003071.1-201ENST00000451219 789 ntBASIC3.51□□□□□ -1.85
CCDC38Q502W7 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.51□□□□□ -1.85
CCDC38Q502W7 AC019235.1-201ENST00000503847 207 ntBASIC3.51□□□□□ -1.85
CCDC38Q502W7 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC3.51□□□□□ -1.85
CCDC38Q502W7 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.51□□□□□ -1.85
CCDC38Q502W7 AC114786.4-201ENST00000508771 728 ntBASIC3.51□□□□□ -1.85
CCDC38Q502W7 RN7SKP18-201ENST00000516005 275 ntBASIC3.51□□□□□ -1.85
CCDC38Q502W7 RNU6-314P-201ENST00000516574 104 ntBASIC3.51□□□□□ -1.85
CCDC38Q502W7 TRMT10BP1-201ENST00000519377 943 ntBASIC3.51□□□□□ -1.85
CCDC38Q502W7 AC104027.1-201ENST00000521887 300 ntBASIC3.51□□□□□ -1.85
CCDC38Q502W7 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.51□□□□□ -1.85
CCDC38Q502W7 NACAP3-201ENST00000552100 481 ntBASIC3.51□□□□□ -1.85
CCDC38Q502W7 ZNF519P2-201ENST00000557032 169 ntBASIC3.51□□□□□ -1.85
CCDC38Q502W7 H3F3AP1-201ENST00000559984 334 ntBASIC3.51□□□□□ -1.85
CCDC38Q502W7 AC008752.3-201ENST00000588113 712 ntBASIC3.51□□□□□ -1.85
CCDC38Q502W7 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.51□□□□□ -1.85
CCDC38Q502W7 AC008739.3-201ENST00000603262 127 ntBASIC3.51□□□□□ -1.85
CCDC38Q502W7 AC080078.2-201ENST00000603766 501 ntBASIC3.51□□□□□ -1.85
CCDC38Q502W7 NUTF2P8-201ENST00000604593 363 ntBASIC3.51□□□□□ -1.85
CCDC38Q502W7 MTND4LP5-201ENST00000605152 292 ntBASIC3.51□□□□□ -1.85
CCDC38Q502W7 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.51□□□□□ -1.85
CCDC38Q502W7 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.51□□□□□ -1.85
CCDC38Q502W7 AC110774.1-201ENST00000623567 2018 ntBASIC3.51□□□□□ -1.85
CCDC38Q502W7 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.51□□□□□ -1.85
CCDC38Q502W7 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.5□□□□□ -1.85
CCDC38Q502W7 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
CCDC38Q502W7 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CCDC38Q502W7 CKAP2P1-201ENST00000555477 2049 ntBASIC3.5□□□□□ -1.85
CCDC38Q502W7 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CCDC38Q502W7 AL139276.1-201ENST00000311910 1001 ntBASIC3.5□□□□□ -1.85
CCDC38Q502W7 RNU6-996P-201ENST00000365438 107 ntBASIC3.5□□□□□ -1.85
CCDC38Q502W7 RNU6-116P-201ENST00000384042 109 ntBASIC3.5□□□□□ -1.85
CCDC38Q502W7 Y_RNA.505-201ENST00000384489 102 ntBASIC3.5□□□□□ -1.85
CCDC38Q502W7 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
CCDC38Q502W7 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
CCDC38Q502W7 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.5□□□□□ -1.85
CCDC38Q502W7 AL591416.1-201ENST00000404015 867 ntBASIC3.5□□□□□ -1.85
CCDC38Q502W7 RNU6-1025P-201ENST00000410629 104 ntBASIC3.5□□□□□ -1.85
CCDC38Q502W7 RNU4-46P-201ENST00000410818 138 ntBASIC3.5□□□□□ -1.85
CCDC38Q502W7 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.5□□□□□ -1.85
CCDC38Q502W7 BMS1P22-201ENST00000414726 313 ntBASIC3.5□□□□□ -1.85
CCDC38Q502W7 AL031779.1-201ENST00000415663 330 ntBASIC3.5□□□□□ -1.85
CCDC38Q502W7 AL356968.1-201ENST00000416622 474 ntBASIC3.5□□□□□ -1.85
CCDC38Q502W7 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC3.5□□□□□ -1.85
CCDC38Q502W7 AL365496.1-201ENST00000426885 215 ntBASIC3.5□□□□□ -1.85
CCDC38Q502W7 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.5□□□□□ -1.85
CCDC38Q502W7 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.5□□□□□ -1.85
CCDC38Q502W7 AL606489.2-201ENST00000433886 234 ntBASIC3.5□□□□□ -1.85
CCDC38Q502W7 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
CCDC38Q502W7 AL358232.1-201ENST00000448030 501 ntBASIC3.5□□□□□ -1.85
CCDC38Q502W7 AC093392.2-201ENST00000450682 337 ntBASIC3.5□□□□□ -1.85
CCDC38Q502W7 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC3.5□□□□□ -1.85
CCDC38Q502W7 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.5□□□□□ -1.85
CCDC38Q502W7 TRBV1-201ENST00000476502 284 ntBASIC3.5□□□□□ -1.85
CCDC38Q502W7 RPL36AP51-201ENST00000487216 318 ntBASIC3.5□□□□□ -1.85
CCDC38Q502W7 AC093663.1-201ENST00000497190 394 ntBASIC3.5□□□□□ -1.85
CCDC38Q502W7 AC092436.1-201ENST00000506450 503 ntBASIC3.5□□□□□ -1.85
CCDC38Q502W7 RN7SKP219-201ENST00000516825 296 ntBASIC3.5□□□□□ -1.85
CCDC38Q502W7 AC009902.1-201ENST00000519351 183 ntBASIC3.5□□□□□ -1.85
CCDC38Q502W7 AC025755.1-201ENST00000521306 278 ntBASIC3.5□□□□□ -1.85
CCDC38Q502W7 AL512310.1-201ENST00000548639 172 ntBASIC3.5□□□□□ -1.85
CCDC38Q502W7 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.5□□□□□ -1.85
CCDC38Q502W7 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC3.5□□□□□ -1.85
CCDC38Q502W7 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC3.5□□□□□ -1.85
CCDC38Q502W7 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.5□□□□□ -1.85
CCDC38Q502W7 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.5□□□□□ -1.85
CCDC38Q502W7 MTATP6P3-201ENST00000581686 676 ntBASIC3.5□□□□□ -1.85
CCDC38Q502W7 HMGN2P15-201ENST00000585707 270 ntBASIC3.5□□□□□ -1.85
CCDC38Q502W7 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC3.5□□□□□ -1.85
CCDC38Q502W7 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.5□□□□□ -1.85
CCDC38Q502W7 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.5□□□□□ -1.85
CCDC38Q502W7 AC007938.3-201ENST00000604965 623 ntBASIC3.5□□□□□ -1.85
CCDC38Q502W7 AF250324.2-201ENST00000608299 610 ntBASIC3.5□□□□□ -1.85
CCDC38Q502W7 AC092954.2-201ENST00000609103 430 ntBASIC3.5□□□□□ -1.85
CCDC38Q502W7 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.5□□□□□ -1.85
CCDC38Q502W7 AC091564.4-201ENST00000533934 2194 ntBASIC3.5□□□□□ -1.85
CCDC38Q502W7 AC103988.1-201ENST00000566382 2177 ntBASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms