Protein–RNA interactions for Protein: Q496Y0

LONRF3, LON peptidase N-terminal domain and RING finger protein 3, humanhuman

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3Q496Y0 RPS29P12-201ENST00000460178 152 ntBASIC4□□□□□ -1.77
LONRF3Q496Y0 RPL7P5-201ENST00000471472 736 ntBASIC4□□□□□ -1.77
LONRF3Q496Y0 AL135752.1-201ENST00000479477 471 ntBASIC4□□□□□ -1.77
LONRF3Q496Y0 AL163973.1-201ENST00000484753 577 ntBASIC4□□□□□ -1.77
LONRF3Q496Y0 NAF1-205ENST00000509434 385 ntTSL 3 BASIC4□□□□□ -1.77
LONRF3Q496Y0 AC074250.1-201ENST00000511117 192 ntBASIC4□□□□□ -1.77
LONRF3Q496Y0 RNU6-1282P-201ENST00000516735 96 ntBASIC4□□□□□ -1.77
LONRF3Q496Y0 RNA5SP290-201ENST00000517133 127 ntBASIC4□□□□□ -1.77
LONRF3Q496Y0 RNU6-1231P-201ENST00000517185 103 ntBASIC4□□□□□ -1.77
LONRF3Q496Y0 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC4□□□□□ -1.77
LONRF3Q496Y0 RANP9-201ENST00000519957 271 ntBASIC4□□□□□ -1.77
LONRF3Q496Y0 NDUFB9P3-201ENST00000521269 501 ntBASIC4□□□□□ -1.77
LONRF3Q496Y0 AC103843.2-201ENST00000530523 682 ntBASIC4□□□□□ -1.77
LONRF3Q496Y0 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC4□□□□□ -1.77
LONRF3Q496Y0 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC4□□□□□ -1.77
LONRF3Q496Y0 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC4□□□□□ -1.77
LONRF3Q496Y0 MIR4425-201ENST00000580572 84 ntBASIC4□□□□□ -1.77
LONRF3Q496Y0 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC4□□□□□ -1.77
LONRF3Q496Y0 AC008945.2-201ENST00000606056 604 ntBASIC4□□□□□ -1.77
LONRF3Q496Y0 RNVU1-4-201ENST00000612985 164 ntBASIC4□□□□□ -1.77
LONRF3Q496Y0 AC063943.3-201ENST00000615562 356 ntBASIC4□□□□□ -1.77
LONRF3Q496Y0 FRG1KP-201ENST00000623592 341 ntBASIC4□□□□□ -1.77
LONRF3Q496Y0 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC4□□□□□ -1.77
LONRF3Q496Y0 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC4□□□□□ -1.77
LONRF3Q496Y0 IDE-202ENST00000371581 4480 ntTSL 2 BASIC4□□□□□ -1.77
LONRF3Q496Y0 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
LONRF3Q496Y0 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
LONRF3Q496Y0 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
LONRF3Q496Y0 AC073343.1-201ENST00000328239 651 ntBASIC3.99□□□□□ -1.77
LONRF3Q496Y0 MIR30E-201ENST00000362104 92 ntBASIC3.99□□□□□ -1.77
LONRF3Q496Y0 RNU6-188P-201ENST00000364207 107 ntBASIC3.99□□□□□ -1.77
LONRF3Q496Y0 RNU6-701P-201ENST00000384059 107 ntBASIC3.99□□□□□ -1.77
LONRF3Q496Y0 ZNF863P-201ENST00000426746 417 ntBASIC3.99□□□□□ -1.77
LONRF3Q496Y0 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC3.99□□□□□ -1.77
LONRF3Q496Y0 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC3.99□□□□□ -1.77
LONRF3Q496Y0 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC3.99□□□□□ -1.77
LONRF3Q496Y0 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.99□□□□□ -1.77
LONRF3Q496Y0 SNORD97-201ENST00000459187 142 ntBASIC3.99□□□□□ -1.77
LONRF3Q496Y0 AC091179.1-201ENST00000461606 579 ntBASIC3.99□□□□□ -1.77
LONRF3Q496Y0 GMFBP1-201ENST00000467831 427 ntBASIC3.99□□□□□ -1.77
LONRF3Q496Y0 RNU2-27P-201ENST00000516185 142 ntBASIC3.99□□□□□ -1.77
LONRF3Q496Y0 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.99□□□□□ -1.77
LONRF3Q496Y0 HIGD1AP1-201ENST00000550979 275 ntBASIC3.99□□□□□ -1.77
LONRF3Q496Y0 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.99□□□□□ -1.77
LONRF3Q496Y0 BNIP3P10-201ENST00000605360 577 ntBASIC3.99□□□□□ -1.77
LONRF3Q496Y0 AC069234.5-201ENST00000611056 416 ntBASIC3.99□□□□□ -1.77
LONRF3Q496Y0 AC096577.2-201ENST00000611455 153 ntBASIC3.99□□□□□ -1.77
LONRF3Q496Y0 AC104260.1-201ENST00000616660 539 ntBASIC3.99□□□□□ -1.77
LONRF3Q496Y0 AL589994.2-201ENST00000621124 579 ntBASIC3.99□□□□□ -1.77
LONRF3Q496Y0 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
LONRF3Q496Y0 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.99□□□□□ -1.77
LONRF3Q496Y0 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
LONRF3Q496Y0 AP003122.5-201ENST00000527668 3766 ntBASIC3.99□□□□□ -1.77
LONRF3Q496Y0 AC007496.3-201ENST00000624987 3443 ntBASIC3.98□□□□□ -1.77
LONRF3Q496Y0 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.98□□□□□ -1.77
LONRF3Q496Y0 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.98□□□□□ -1.77
LONRF3Q496Y0 SNORA62.1-201ENST00000364287 154 ntBASIC3.98□□□□□ -1.77
LONRF3Q496Y0 RNU6-1035P-201ENST00000384477 107 ntBASIC3.98□□□□□ -1.77
LONRF3Q496Y0 MIR184-201ENST00000384962 84 ntBASIC3.98□□□□□ -1.77
LONRF3Q496Y0 RNU2-33P-201ENST00000410344 192 ntBASIC3.98□□□□□ -1.77
LONRF3Q496Y0 RNA5SP118-201ENST00000410385 109 ntBASIC3.98□□□□□ -1.77
LONRF3Q496Y0 ATG3P1-201ENST00000419507 911 ntBASIC3.98□□□□□ -1.77
LONRF3Q496Y0 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.98□□□□□ -1.77
LONRF3Q496Y0 MTCYBP8-201ENST00000422855 651 ntBASIC3.98□□□□□ -1.77
LONRF3Q496Y0 RAC1P6-201ENST00000423911 575 ntBASIC3.98□□□□□ -1.77
LONRF3Q496Y0 AC098614.3-201ENST00000438957 440 ntBASIC3.98□□□□□ -1.77
LONRF3Q496Y0 USP9YP8-201ENST00000441913 500 ntBASIC3.98□□□□□ -1.77
LONRF3Q496Y0 RPL21P23-201ENST00000446654 460 ntBASIC3.98□□□□□ -1.77
LONRF3Q496Y0 AC073415.1-201ENST00000449240 153 ntBASIC3.98□□□□□ -1.77
LONRF3Q496Y0 RPS29P15-201ENST00000458329 171 ntBASIC3.98□□□□□ -1.77
LONRF3Q496Y0 MRPS17P3-201ENST00000465453 385 ntBASIC3.98□□□□□ -1.77
LONRF3Q496Y0 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.98□□□□□ -1.77
LONRF3Q496Y0 AL160314.1-201ENST00000490836 438 ntBASIC3.98□□□□□ -1.77
LONRF3Q496Y0 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC3.98□□□□□ -1.77
LONRF3Q496Y0 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.98□□□□□ -1.77
LONRF3Q496Y0 AC105417.1-201ENST00000514691 285 ntBASIC3.98□□□□□ -1.77
LONRF3Q496Y0 RNU6-1092P-201ENST00000516955 87 ntBASIC3.98□□□□□ -1.77
LONRF3Q496Y0 CENPUP1-201ENST00000526649 1202 ntBASIC3.98□□□□□ -1.77
LONRF3Q496Y0 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.98□□□□□ -1.77
LONRF3Q496Y0 ADI1P3-201ENST00000549509 470 ntBASIC3.98□□□□□ -1.77
LONRF3Q496Y0 MIR4775-201ENST00000581168 75 ntBASIC3.98□□□□□ -1.77
LONRF3Q496Y0 AC009994.1-201ENST00000606889 253 ntBASIC3.98□□□□□ -1.77
LONRF3Q496Y0 RMST_8.1-201ENST00000610287 165 ntBASIC3.98□□□□□ -1.77
LONRF3Q496Y0 AL161629.2-201ENST00000615347 275 ntBASIC3.98□□□□□ -1.77
LONRF3Q496Y0 AC006504.8-201ENST00000621046 635 ntBASIC3.98□□□□□ -1.77
LONRF3Q496Y0 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC3.98□□□□□ -1.77
LONRF3Q496Y0 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.98□□□□□ -1.77
LONRF3Q496Y0 MTND5P17-201ENST00000418405 1603 ntBASIC3.98□□□□□ -1.77
LONRF3Q496Y0 MTND4P12-201ENST00000498999 1377 ntBASIC3.98□□□□□ -1.77
LONRF3Q496Y0 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
LONRF3Q496Y0 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
LONRF3Q496Y0 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.97□□□□□ -1.77
LONRF3Q496Y0 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.97□□□□□ -1.77
LONRF3Q496Y0 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
LONRF3Q496Y0 RIOK3P1-201ENST00000418778 1528 ntBASIC3.97□□□□□ -1.77
LONRF3Q496Y0 NACAP2-201ENST00000318548 624 ntBASIC3.97□□□□□ -1.77
LONRF3Q496Y0 Y_RNA.86-201ENST00000363020 111 ntBASIC3.97□□□□□ -1.77
LONRF3Q496Y0 RNU6-960P-201ENST00000364056 120 ntBASIC3.97□□□□□ -1.77
LONRF3Q496Y0 MIR34B-201ENST00000385076 84 ntBASIC3.97□□□□□ -1.77
LONRF3Q496Y0 AC093106.2-201ENST00000428212 385 ntBASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 185.6 ms