Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 AC005730.3-201ENST00000583067 366 ntBASIC4.44□□□□□ -1.7
CCDC144BQ3MJ40 HSPE1P7-201ENST00000604681 321 ntBASIC4.44□□□□□ -1.7
CCDC144BQ3MJ40 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CCDC144BQ3MJ40 AC090617.10-201ENST00000624308 134 ntBASIC4.44□□□□□ -1.7
CCDC144BQ3MJ40 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC4.44□□□□□ -1.7
CCDC144BQ3MJ40 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC4.44□□□□□ -1.7
CCDC144BQ3MJ40 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CCDC144BQ3MJ40 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
CCDC144BQ3MJ40 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC4.44□□□□□ -1.7
CCDC144BQ3MJ40 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CCDC144BQ3MJ40 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.44□□□□□ -1.7
CCDC144BQ3MJ40 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CCDC144BQ3MJ40 HSPA8P1-201ENST00000425843 1833 ntBASIC4.44□□□□□ -1.7
CCDC144BQ3MJ40 LINC02471-203ENST00000641941 4752 ntBASIC4.43□□□□□ -1.7
CCDC144BQ3MJ40 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CCDC144BQ3MJ40 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC4.43□□□□□ -1.7
CCDC144BQ3MJ40 RNU6-867P-201ENST00000364956 107 ntBASIC4.43□□□□□ -1.7
CCDC144BQ3MJ40 U1.1-201ENST00000384101 164 ntBASIC4.43□□□□□ -1.7
CCDC144BQ3MJ40 RNU6-767P-201ENST00000384132 107 ntBASIC4.43□□□□□ -1.7
CCDC144BQ3MJ40 RPL26P27-201ENST00000414397 437 ntBASIC4.43□□□□□ -1.7
CCDC144BQ3MJ40 SYF2P2-201ENST00000417620 583 ntBASIC4.43□□□□□ -1.7
CCDC144BQ3MJ40 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC4.43□□□□□ -1.7
CCDC144BQ3MJ40 AL158071.1-201ENST00000430315 461 ntBASIC4.43□□□□□ -1.7
CCDC144BQ3MJ40 RPL23AP83-201ENST00000434984 473 ntBASIC4.43□□□□□ -1.7
CCDC144BQ3MJ40 RPL7P12-201ENST00000446719 750 ntBASIC4.43□□□□□ -1.7
CCDC144BQ3MJ40 RPL37P4-201ENST00000448908 268 ntBASIC4.43□□□□□ -1.7
CCDC144BQ3MJ40 MTATP6P7-201ENST00000453315 681 ntBASIC4.43□□□□□ -1.7
CCDC144BQ3MJ40 PMCHL2-203ENST00000457791 237 ntBASIC4.43□□□□□ -1.7
CCDC144BQ3MJ40 DYNLL1P5-201ENST00000467158 270 ntBASIC4.43□□□□□ -1.7
CCDC144BQ3MJ40 TRBVA-201ENST00000498804 316 ntBASIC4.43□□□□□ -1.7
CCDC144BQ3MJ40 AC009901.1-201ENST00000506703 541 ntBASIC4.43□□□□□ -1.7
CCDC144BQ3MJ40 RNU6-928P-201ENST00000516876 104 ntBASIC4.43□□□□□ -1.7
CCDC144BQ3MJ40 AC069113.1-201ENST00000517763 267 ntBASIC4.43□□□□□ -1.7
CCDC144BQ3MJ40 AC025755.1-201ENST00000521306 278 ntBASIC4.43□□□□□ -1.7
CCDC144BQ3MJ40 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CCDC144BQ3MJ40 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC4.43□□□□□ -1.7
CCDC144BQ3MJ40 AC090115.3-201ENST00000553218 849 ntBASIC4.43□□□□□ -1.7
CCDC144BQ3MJ40 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC4.43□□□□□ -1.7
CCDC144BQ3MJ40 VN1R80P-201ENST00000597126 338 ntBASIC4.43□□□□□ -1.7
CCDC144BQ3MJ40 AL645944.1-201ENST00000603857 493 ntBASIC4.43□□□□□ -1.7
CCDC144BQ3MJ40 AL161756.2-201ENST00000604597 246 ntBASIC4.43□□□□□ -1.7
CCDC144BQ3MJ40 AL391261.4-201ENST00000616012 481 ntBASIC4.43□□□□□ -1.7
CCDC144BQ3MJ40 AC084757.4-201ENST00000616350 526 ntBASIC4.43□□□□□ -1.7
CCDC144BQ3MJ40 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4.43□□□□□ -1.7
CCDC144BQ3MJ40 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
CCDC144BQ3MJ40 MTND5P7-201ENST00000413558 1798 ntBASIC4.42□□□□□ -1.7
CCDC144BQ3MJ40 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.42□□□□□ -1.7
CCDC144BQ3MJ40 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC144BQ3MJ40 CBX3P1-201ENST00000325243 554 ntBASIC4.42□□□□□ -1.7
CCDC144BQ3MJ40 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
CCDC144BQ3MJ40 AC007256.1-201ENST00000392253 2765 ntBASIC4.42□□□□□ -1.7
CCDC144BQ3MJ40 RPS4XP7-201ENST00000406274 780 ntBASIC4.42□□□□□ -1.7
CCDC144BQ3MJ40 Z98941.1-201ENST00000407764 100 ntBASIC4.42□□□□□ -1.7
CCDC144BQ3MJ40 RNU6-607P-201ENST00000411283 108 ntBASIC4.42□□□□□ -1.7
CCDC144BQ3MJ40 BX323014.1-201ENST00000412876 237 ntBASIC4.42□□□□□ -1.7
CCDC144BQ3MJ40 RPLP0P7-201ENST00000416050 667 ntBASIC4.42□□□□□ -1.7
CCDC144BQ3MJ40 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC4.42□□□□□ -1.7
CCDC144BQ3MJ40 RPL35AP12-201ENST00000425362 338 ntBASIC4.42□□□□□ -1.7
CCDC144BQ3MJ40 MYL8P-204ENST00000431574 518 ntBASIC4.42□□□□□ -1.7
CCDC144BQ3MJ40 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC4.42□□□□□ -1.7
CCDC144BQ3MJ40 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC4.42□□□□□ -1.7
CCDC144BQ3MJ40 RPL21P93-201ENST00000480465 489 ntBASIC4.42□□□□□ -1.7
CCDC144BQ3MJ40 FAM206BP-201ENST00000510179 541 ntBASIC4.42□□□□□ -1.7
CCDC144BQ3MJ40 RN7SKP256-201ENST00000517201 314 ntBASIC4.42□□□□□ -1.7
CCDC144BQ3MJ40 AC009902.1-201ENST00000519351 183 ntBASIC4.42□□□□□ -1.7
CCDC144BQ3MJ40 APAF1-207ENST00000547743 651 ntTSL 3 BASIC4.42□□□□□ -1.7
CCDC144BQ3MJ40 TRAV37-201ENST00000553906 342 ntBASIC4.42□□□□□ -1.7
CCDC144BQ3MJ40 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.42□□□□□ -1.7
CCDC144BQ3MJ40 MIR4474-201ENST00000579189 78 ntBASIC4.42□□□□□ -1.7
CCDC144BQ3MJ40 LRRC37A5P-203ENST00000580181 585 ntBASIC4.42□□□□□ -1.7
CCDC144BQ3MJ40 UBE2V2P2-201ENST00000587677 504 ntBASIC4.42□□□□□ -1.7
CCDC144BQ3MJ40 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC4.42□□□□□ -1.7
CCDC144BQ3MJ40 AC244505.7-201ENST00000599675 272 ntBASIC4.42□□□□□ -1.7
CCDC144BQ3MJ40 SRGNP1-201ENST00000603392 451 ntBASIC4.42□□□□□ -1.7
CCDC144BQ3MJ40 AC022306.2-201ENST00000617563 647 ntBASIC4.42□□□□□ -1.7
CCDC144BQ3MJ40 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.42□□□□□ -1.7
CCDC144BQ3MJ40 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.42□□□□□ -1.7
CCDC144BQ3MJ40 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CCDC144BQ3MJ40 AC006504.1-201ENST00000562493 3666 ntBASIC4.41□□□□□ -1.7
CCDC144BQ3MJ40 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.41□□□□□ -1.7
CCDC144BQ3MJ40 SNORD113-7-201ENST00000363762 77 ntBASIC4.41□□□□□ -1.7
CCDC144BQ3MJ40 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC4.41□□□□□ -1.7
CCDC144BQ3MJ40 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
CCDC144BQ3MJ40 SNORA40C-201ENST00000391285 128 ntBASIC4.41□□□□□ -1.7
CCDC144BQ3MJ40 NDUFS5P4-201ENST00000412983 318 ntBASIC4.41□□□□□ -1.7
CCDC144BQ3MJ40 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.41□□□□□ -1.7
CCDC144BQ3MJ40 AC098614.2-201ENST00000426040 255 ntBASIC4.41□□□□□ -1.7
CCDC144BQ3MJ40 HMGB1P9-201ENST00000429856 646 ntBASIC4.41□□□□□ -1.7
CCDC144BQ3MJ40 AL627311.1-201ENST00000431514 115 ntBASIC4.41□□□□□ -1.7
CCDC144BQ3MJ40 NDUFA5P4-201ENST00000436704 385 ntBASIC4.41□□□□□ -1.7
CCDC144BQ3MJ40 AC092798.1-201ENST00000458542 409 ntBASIC4.41□□□□□ -1.7
CCDC144BQ3MJ40 RPL23AP62-201ENST00000463396 453 ntBASIC4.41□□□□□ -1.7
CCDC144BQ3MJ40 AC139453.3-201ENST00000493276 369 ntBASIC4.41□□□□□ -1.7
CCDC144BQ3MJ40 SNORA14.1-201ENST00000516113 141 ntBASIC4.41□□□□□ -1.7
CCDC144BQ3MJ40 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC4.41□□□□□ -1.7
CCDC144BQ3MJ40 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC4.41□□□□□ -1.7
CCDC144BQ3MJ40 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC4.41□□□□□ -1.7
CCDC144BQ3MJ40 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC4.41□□□□□ -1.7
CCDC144BQ3MJ40 AC007991.1-201ENST00000522680 631 ntBASIC4.41□□□□□ -1.7
CCDC144BQ3MJ40 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms