Protein–RNA interactions for Protein: Q12829

RAB40B, Ras-related protein Rab-40B, humanhuman

Predictions only

Length 278 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40BQ12829 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC2.29□□□□□ -2.04
RAB40BQ12829 AC080125.1-201ENST00000414888 684 ntBASIC2.29□□□□□ -2.04
RAB40BQ12829 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC2.29□□□□□ -2.04
RAB40BQ12829 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC2.29□□□□□ -2.04
RAB40BQ12829 HMGB3P12-201ENST00000438745 556 ntBASIC2.29□□□□□ -2.04
RAB40BQ12829 MTATP6P7-201ENST00000453315 681 ntBASIC2.29□□□□□ -2.04
RAB40BQ12829 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.29□□□□□ -2.04
RAB40BQ12829 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.29□□□□□ -2.04
RAB40BQ12829 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC2.29□□□□□ -2.04
RAB40BQ12829 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.29□□□□□ -2.04
RAB40BQ12829 HIGD1AP13-201ENST00000509878 289 ntBASIC2.29□□□□□ -2.04
RAB40BQ12829 MTND1P22-201ENST00000510572 951 ntBASIC2.29□□□□□ -2.04
RAB40BQ12829 RNU6-759P-201ENST00000516740 103 ntBASIC2.29□□□□□ -2.04
RAB40BQ12829 SNORA31.15-201ENST00000516771 132 ntBASIC2.29□□□□□ -2.04
RAB40BQ12829 LRRC34P1-201ENST00000542742 915 ntBASIC2.29□□□□□ -2.04
RAB40BQ12829 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC2.29□□□□□ -2.04
RAB40BQ12829 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.29□□□□□ -2.04
RAB40BQ12829 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.29□□□□□ -2.04
RAB40BQ12829 NRBF2P5-201ENST00000603087 788 ntBASIC2.29□□□□□ -2.04
RAB40BQ12829 AL022161.1-201ENST00000604390 213 ntBASIC2.29□□□□□ -2.04
RAB40BQ12829 AL031775.1-201ENST00000607014 887 ntBASIC2.29□□□□□ -2.04
RAB40BQ12829 AL360219.1-201ENST00000610230 366 ntBASIC2.29□□□□□ -2.04
RAB40BQ12829 AC140725.3-201ENST00000616193 880 ntBASIC2.29□□□□□ -2.04
RAB40BQ12829 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC2.29□□□□□ -2.04
RAB40BQ12829 AC007998.5-201ENST00000622938 237 ntBASIC2.29□□□□□ -2.04
RAB40BQ12829 AF246928.1-201ENST00000623768 87 ntBASIC2.29□□□□□ -2.04
RAB40BQ12829 MTND5P42-201ENST00000637720 498 ntBASIC2.29□□□□□ -2.04
RAB40BQ12829 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.29□□□□□ -2.04
RAB40BQ12829 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.28□□□□□ -2.04
RAB40BQ12829 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
RAB40BQ12829 AC004520.1-201ENST00000608362 1413 ntBASIC2.28□□□□□ -2.04
RAB40BQ12829 MTND4P35-201ENST00000604257 1375 ntBASIC2.28□□□□□ -2.04
RAB40BQ12829 RNU6-553P-201ENST00000364047 96 ntBASIC2.28□□□□□ -2.04
RAB40BQ12829 MIR9-1-201ENST00000385198 89 ntBASIC2.28□□□□□ -2.04
RAB40BQ12829 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
RAB40BQ12829 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.28□□□□□ -2.04
RAB40BQ12829 MRPL42P2-201ENST00000403169 426 ntBASIC2.28□□□□□ -2.04
RAB40BQ12829 AL591212.2-201ENST00000433923 257 ntBASIC2.28□□□□□ -2.04
RAB40BQ12829 AC119618.1-201ENST00000434191 222 ntBASIC2.28□□□□□ -2.04
RAB40BQ12829 OSTCP8-201ENST00000445117 448 ntBASIC2.28□□□□□ -2.04
RAB40BQ12829 USP9YP12-201ENST00000450481 570 ntBASIC2.28□□□□□ -2.04
RAB40BQ12829 KATNBL1P6-201ENST00000453433 915 ntBASIC2.28□□□□□ -2.04
RAB40BQ12829 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.28□□□□□ -2.04
RAB40BQ12829 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC2.28□□□□□ -2.04
RAB40BQ12829 AC022447.1-201ENST00000515358 464 ntBASIC2.28□□□□□ -2.04
RAB40BQ12829 RNU5F-8P-201ENST00000515941 111 ntBASIC2.28□□□□□ -2.04
RAB40BQ12829 RNU6-677P-201ENST00000516914 101 ntBASIC2.28□□□□□ -2.04
RAB40BQ12829 RNU6-703P-201ENST00000516946 107 ntBASIC2.28□□□□□ -2.04
RAB40BQ12829 RNA5SP337-201ENST00000517007 109 ntBASIC2.28□□□□□ -2.04
RAB40BQ12829 Y_RNA.717-201ENST00000517106 92 ntBASIC2.28□□□□□ -2.04
RAB40BQ12829 SCARNA11.3-201ENST00000517276 130 ntBASIC2.28□□□□□ -2.04
RAB40BQ12829 CKS1BP7-201ENST00000522230 235 ntBASIC2.28□□□□□ -2.04
RAB40BQ12829 AP003181.2-201ENST00000528941 181 ntBASIC2.28□□□□□ -2.04
RAB40BQ12829 AC021739.1-201ENST00000559631 174 ntBASIC2.28□□□□□ -2.04
RAB40BQ12829 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC2.28□□□□□ -2.04
RAB40BQ12829 AC007151.1-201ENST00000572774 483 ntBASIC2.28□□□□□ -2.04
RAB40BQ12829 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.28□□□□□ -2.04
RAB40BQ12829 MIR3117-201ENST00000584034 78 ntBASIC2.28□□□□□ -2.04
RAB40BQ12829 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.28□□□□□ -2.04
RAB40BQ12829 AL451007.1-201ENST00000595491 289 ntBASIC2.28□□□□□ -2.04
RAB40BQ12829 AC073544.2-201ENST00000601155 540 ntBASIC2.28□□□□□ -2.04
RAB40BQ12829 WISP1-OT1-201ENST00000602893 642 ntBASIC2.28□□□□□ -2.04
RAB40BQ12829 RNU6-87P-201ENST00000607561 108 ntBASIC2.28□□□□□ -2.04
RAB40BQ12829 AC138749.5-201ENST00000611461 208 ntBASIC2.28□□□□□ -2.04
RAB40BQ12829 AL137847.3-201ENST00000611521 109 ntBASIC2.28□□□□□ -2.04
RAB40BQ12829 AL365204.3-201ENST00000612448 685 ntBASIC2.28□□□□□ -2.04
RAB40BQ12829 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.28□□□□□ -2.04
RAB40BQ12829 AC122133.1-201ENST00000613964 233 ntBASIC2.28□□□□□ -2.04
RAB40BQ12829 AC116165.2-201ENST00000616705 206 ntBASIC2.28□□□□□ -2.04
RAB40BQ12829 AC092140.2-201ENST00000618027 521 ntBASIC2.28□□□□□ -2.04
RAB40BQ12829 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.28□□□□□ -2.04
RAB40BQ12829 AL512643.1-201ENST00000635735 524 ntBASIC2.28□□□□□ -2.04
RAB40BQ12829 Z99571.1-201ENST00000636677 394 ntBASIC2.28□□□□□ -2.04
RAB40BQ12829 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.28□□□□□ -2.04
RAB40BQ12829 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.27□□□□□ -2.05
RAB40BQ12829 SNORA18.3-201ENST00000384122 132 ntBASIC2.27□□□□□ -2.05
RAB40BQ12829 HMGN2P35-201ENST00000412164 270 ntBASIC2.27□□□□□ -2.05
RAB40BQ12829 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.27□□□□□ -2.05
RAB40BQ12829 Z99497.1-201ENST00000421282 135 ntBASIC2.27□□□□□ -2.05
RAB40BQ12829 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC2.27□□□□□ -2.05
RAB40BQ12829 AL356583.2-201ENST00000426536 280 ntBASIC2.27□□□□□ -2.05
RAB40BQ12829 AC087499.2-201ENST00000432861 149 ntBASIC2.27□□□□□ -2.05
RAB40BQ12829 MTND1P30-201ENST00000441241 901 ntBASIC2.27□□□□□ -2.05
RAB40BQ12829 UBE2D3P4-201ENST00000441973 436 ntBASIC2.27□□□□□ -2.05
RAB40BQ12829 COX6CP12-201ENST00000446748 202 ntBASIC2.27□□□□□ -2.05
RAB40BQ12829 HMGN2P10-201ENST00000448085 265 ntBASIC2.27□□□□□ -2.05
RAB40BQ12829 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
RAB40BQ12829 AC093899.1-201ENST00000457984 376 ntBASIC2.27□□□□□ -2.05
RAB40BQ12829 TRBV1-201ENST00000476502 284 ntBASIC2.27□□□□□ -2.05
RAB40BQ12829 RPS3AP14-201ENST00000483907 780 ntBASIC2.27□□□□□ -2.05
RAB40BQ12829 AC026801.1-201ENST00000497178 464 ntBASIC2.27□□□□□ -2.05
RAB40BQ12829 EIF4EP3-201ENST00000498782 656 ntBASIC2.27□□□□□ -2.05
RAB40BQ12829 AC010587.1-201ENST00000505809 469 ntBASIC2.27□□□□□ -2.05
RAB40BQ12829 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC2.27□□□□□ -2.05
RAB40BQ12829 RNU7-51P-201ENST00000516560 62 ntBASIC2.27□□□□□ -2.05
RAB40BQ12829 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC2.27□□□□□ -2.05
RAB40BQ12829 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC2.27□□□□□ -2.05
RAB40BQ12829 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.27□□□□□ -2.05
RAB40BQ12829 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC2.27□□□□□ -2.05
RAB40BQ12829 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms