Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC4.58□□□□□ -1.68
PCDH1Q08174 AC005476.1-201ENST00000554427 397 ntBASIC4.58□□□□□ -1.68
PCDH1Q08174 HNRNPCP4-201ENST00000571636 900 ntBASIC4.58□□□□□ -1.68
PCDH1Q08174 AC104581.2-201ENST00000572227 430 ntBASIC4.58□□□□□ -1.68
PCDH1Q08174 MIR4300-201ENST00000581016 96 ntBASIC4.58□□□□□ -1.68
PCDH1Q08174 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC4.58□□□□□ -1.68
PCDH1Q08174 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.58□□□□□ -1.68
PCDH1Q08174 AC024940.4-201ENST00000605507 246 ntBASIC4.58□□□□□ -1.68
PCDH1Q08174 AC005046.1-201ENST00000608515 625 ntBASIC4.58□□□□□ -1.68
PCDH1Q08174 MIR6748-201ENST00000610433 71 ntBASIC4.58□□□□□ -1.68
PCDH1Q08174 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC4.58□□□□□ -1.68
PCDH1Q08174 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.58□□□□□ -1.68
PCDH1Q08174 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
PCDH1Q08174 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
PCDH1Q08174 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
PCDH1Q08174 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
PCDH1Q08174 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
PCDH1Q08174 AC107068.1-201ENST00000563286 4218 ntBASIC4.57□□□□□ -1.68
PCDH1Q08174 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
PCDH1Q08174 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
PCDH1Q08174 SALL4P2-201ENST00000423288 2910 ntBASIC4.57□□□□□ -1.68
PCDH1Q08174 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.57□□□□□ -1.68
PCDH1Q08174 RNU1-35P-201ENST00000362782 153 ntBASIC4.57□□□□□ -1.68
PCDH1Q08174 RNU6-227P-201ENST00000362865 103 ntBASIC4.57□□□□□ -1.68
PCDH1Q08174 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.57□□□□□ -1.68
PCDH1Q08174 Y_RNA.405-201ENST00000383979 100 ntBASIC4.57□□□□□ -1.68
PCDH1Q08174 Y_RNA.451-201ENST00000384200 100 ntBASIC4.57□□□□□ -1.68
PCDH1Q08174 Y_RNA.524-201ENST00000384564 100 ntBASIC4.57□□□□□ -1.68
PCDH1Q08174 Y_RNA.561-201ENST00000384694 100 ntBASIC4.57□□□□□ -1.68
PCDH1Q08174 MRPL35P1-201ENST00000404272 572 ntBASIC4.57□□□□□ -1.68
PCDH1Q08174 RPL37P18-201ENST00000411602 243 ntBASIC4.57□□□□□ -1.68
PCDH1Q08174 AP000275.1-201ENST00000411943 390 ntBASIC4.57□□□□□ -1.68
PCDH1Q08174 RPS12P23-201ENST00000419579 400 ntBASIC4.57□□□□□ -1.68
PCDH1Q08174 RPL23AP22-201ENST00000437556 453 ntBASIC4.57□□□□□ -1.68
PCDH1Q08174 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC4.57□□□□□ -1.68
PCDH1Q08174 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC4.57□□□□□ -1.68
PCDH1Q08174 AL359273.1-201ENST00000510918 627 ntBASIC4.57□□□□□ -1.68
PCDH1Q08174 SNORA31.19-201ENST00000517079 126 ntBASIC4.57□□□□□ -1.68
PCDH1Q08174 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.57□□□□□ -1.68
PCDH1Q08174 SYF2P1-201ENST00000550658 413 ntBASIC4.57□□□□□ -1.68
PCDH1Q08174 AC105129.1-201ENST00000560250 297 ntBASIC4.57□□□□□ -1.68
PCDH1Q08174 AC023575.1-201ENST00000580510 358 ntBASIC4.57□□□□□ -1.68
PCDH1Q08174 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.57□□□□□ -1.68
PCDH1Q08174 AC234771.5-201ENST00000600161 514 ntBASIC4.57□□□□□ -1.68
PCDH1Q08174 AL391358.1-201ENST00000605342 190 ntBASIC4.57□□□□□ -1.68
PCDH1Q08174 FAM27B-201ENST00000610601 213 ntBASIC4.57□□□□□ -1.68
PCDH1Q08174 AL450472.1-202ENST00000637286 180 ntBASIC4.57□□□□□ -1.68
PCDH1Q08174 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
PCDH1Q08174 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
PCDH1Q08174 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
PCDH1Q08174 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC4.57□□□□□ -1.68
PCDH1Q08174 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.57□□□□□ -1.68
PCDH1Q08174 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
PCDH1Q08174 Y_RNA.54-201ENST00000362766 105 ntBASIC4.56□□□□□ -1.68
PCDH1Q08174 Y_RNA.65-201ENST00000362846 100 ntBASIC4.56□□□□□ -1.68
PCDH1Q08174 Y_RNA.274-201ENST00000364714 101 ntBASIC4.56□□□□□ -1.68
PCDH1Q08174 Y_RNA.297-201ENST00000364950 91 ntBASIC4.56□□□□□ -1.68
PCDH1Q08174 RNY3P4-201ENST00000384428 101 ntBASIC4.56□□□□□ -1.68
PCDH1Q08174 RNA5SP113-201ENST00000410486 84 ntBASIC4.56□□□□□ -1.68
PCDH1Q08174 CYP4F29P-201ENST00000420685 446 ntBASIC4.56□□□□□ -1.68
PCDH1Q08174 NDUFB4P7-201ENST00000423198 363 ntBASIC4.56□□□□□ -1.68
PCDH1Q08174 AL356867.1-201ENST00000429623 299 ntBASIC4.56□□□□□ -1.68
PCDH1Q08174 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC4.56□□□□□ -1.68
PCDH1Q08174 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
PCDH1Q08174 RPL23AP24-201ENST00000458203 385 ntBASIC4.56□□□□□ -1.68
PCDH1Q08174 RNU7-87P-201ENST00000459343 62 ntBASIC4.56□□□□□ -1.68
PCDH1Q08174 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.56□□□□□ -1.68
PCDH1Q08174 RPS23P5-201ENST00000495419 428 ntBASIC4.56□□□□□ -1.68
PCDH1Q08174 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.56□□□□□ -1.68
PCDH1Q08174 RNU6-377P-201ENST00000515965 102 ntBASIC4.56□□□□□ -1.68
PCDH1Q08174 Y_RNA.706-201ENST00000516933 99 ntBASIC4.56□□□□□ -1.68
PCDH1Q08174 AC134698.5-201ENST00000519444 336 ntBASIC4.56□□□□□ -1.68
PCDH1Q08174 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.56□□□□□ -1.68
PCDH1Q08174 AP002770.2-201ENST00000543613 532 ntBASIC4.56□□□□□ -1.68
PCDH1Q08174 AC133555.2-201ENST00000550213 292 ntBASIC4.56□□□□□ -1.68
PCDH1Q08174 MED28P6-201ENST00000558776 231 ntBASIC4.56□□□□□ -1.68
PCDH1Q08174 AC136932.1-201ENST00000574771 208 ntBASIC4.56□□□□□ -1.68
PCDH1Q08174 BX284668.6-201ENST00000606899 438 ntBASIC4.56□□□□□ -1.68
PCDH1Q08174 AC004792.1-201ENST00000614523 137 ntBASIC4.56□□□□□ -1.68
PCDH1Q08174 AC087385.3-201ENST00000620477 187 ntBASIC4.56□□□□□ -1.68
PCDH1Q08174 U2.22-201ENST00000636441 106 ntBASIC4.56□□□□□ -1.68
PCDH1Q08174 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC4.56□□□□□ -1.68
PCDH1Q08174 LINC02555-201ENST00000563933 1951 ntBASIC4.56□□□□□ -1.68
PCDH1Q08174 SAMMSON-226ENST00000642089 1582 ntBASIC4.56□□□□□ -1.68
PCDH1Q08174 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.56□□□□□ -1.68
PCDH1Q08174 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.56□□□□□ -1.68
PCDH1Q08174 HSPA8P1-201ENST00000425843 1833 ntBASIC4.56□□□□□ -1.68
PCDH1Q08174 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.55□□□□□ -1.68
PCDH1Q08174 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
PCDH1Q08174 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.55□□□□□ -1.68
PCDH1Q08174 RNU6-166P-201ENST00000384371 107 ntBASIC4.55□□□□□ -1.68
PCDH1Q08174 RPS29P13-201ENST00000402041 169 ntBASIC4.55□□□□□ -1.68
PCDH1Q08174 Y_RNA.625-201ENST00000411256 107 ntBASIC4.55□□□□□ -1.68
PCDH1Q08174 RN7SKP100-201ENST00000411258 284 ntBASIC4.55□□□□□ -1.68
PCDH1Q08174 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.55□□□□□ -1.68
PCDH1Q08174 AC007560.1-201ENST00000426912 237 ntBASIC4.55□□□□□ -1.68
PCDH1Q08174 AC007919.1-201ENST00000429380 217 ntBASIC4.55□□□□□ -1.68
PCDH1Q08174 BX679664.1-201ENST00000434429 253 ntBASIC4.55□□□□□ -1.68
PCDH1Q08174 AC006466.1-201ENST00000438721 289 ntBASIC4.55□□□□□ -1.68
PCDH1Q08174 ISCUP1-201ENST00000454451 448 ntBASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms