Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 MTCO1P53-201ENST00000441633 699 ntBASIC1.31□□□□□ -2.2
CCL20P78556 AL161788.1-201ENST00000441805 169 ntBASIC1.31□□□□□ -2.2
CCL20P78556 AL360221.1-201ENST00000445989 335 ntBASIC1.31□□□□□ -2.2
CCL20P78556 AC020550.1-201ENST00000447385 163 ntBASIC1.31□□□□□ -2.2
CCL20P78556 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC1.31□□□□□ -2.2
CCL20P78556 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC1.31□□□□□ -2.2
CCL20P78556 AL441985.1-201ENST00000457727 251 ntBASIC1.31□□□□□ -2.2
CCL20P78556 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC1.31□□□□□ -2.2
CCL20P78556 AC140059.1-201ENST00000489238 361 ntBASIC1.31□□□□□ -2.2
CCL20P78556 AC055855.1-201ENST00000489563 579 ntBASIC1.31□□□□□ -2.2
CCL20P78556 AC106872.3-201ENST00000495104 446 ntBASIC1.31□□□□□ -2.2
CCL20P78556 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
CCL20P78556 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC1.31□□□□□ -2.2
CCL20P78556 ANXA2P1-201ENST00000505539 926 ntBASIC1.31□□□□□ -2.2
CCL20P78556 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC1.31□□□□□ -2.2
CCL20P78556 AC008628.1-201ENST00000508663 265 ntBASIC1.31□□□□□ -2.2
CCL20P78556 MTCYBP16-201ENST00000509187 1129 ntBASIC1.31□□□□□ -2.2
CCL20P78556 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC1.31□□□□□ -2.2
CCL20P78556 AC091965.2-201ENST00000512324 613 ntBASIC1.31□□□□□ -2.2
CCL20P78556 AC110760.3-202ENST00000515177 371 ntBASIC1.31□□□□□ -2.2
CCL20P78556 RNU6-334P-201ENST00000517072 102 ntBASIC1.31□□□□□ -2.2
CCL20P78556 EEF1A1P37-201ENST00000522748 715 ntBASIC1.31□□□□□ -2.2
CCL20P78556 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.31□□□□□ -2.2
CCL20P78556 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC1.31□□□□□ -2.2
CCL20P78556 RANP3-201ENST00000530970 276 ntBASIC1.31□□□□□ -2.2
CCL20P78556 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC1.31□□□□□ -2.2
CCL20P78556 AL078605.1-201ENST00000603529 500 ntBASIC1.31□□□□□ -2.2
CCL20P78556 AC098826.3-201ENST00000603823 466 ntBASIC1.31□□□□□ -2.2
CCL20P78556 AC093875.1-201ENST00000623688 504 ntBASIC1.31□□□□□ -2.2
CCL20P78556 AC004777.1-201ENST00000624317 287 ntBASIC1.31□□□□□ -2.2
CCL20P78556 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.31□□□□□ -2.2
CCL20P78556 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC1.3□□□□□ -2.2
CCL20P78556 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
CCL20P78556 MIR1294-201ENST00000408503 142 ntBASIC1.3□□□□□ -2.2
CCL20P78556 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC1.3□□□□□ -2.2
CCL20P78556 MTCO2P1-201ENST00000424648 477 ntBASIC1.3□□□□□ -2.2
CCL20P78556 AC092017.2-201ENST00000427600 362 ntBASIC1.3□□□□□ -2.2
CCL20P78556 GPM6BP2-201ENST00000432046 144 ntBASIC1.3□□□□□ -2.2
CCL20P78556 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
CCL20P78556 GPM6BP1-201ENST00000446387 144 ntBASIC1.3□□□□□ -2.2
CCL20P78556 FABP5P13-201ENST00000452144 328 ntBASIC1.3□□□□□ -2.2
CCL20P78556 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC1.3□□□□□ -2.2
CCL20P78556 AC092001.1-201ENST00000453012 261 ntBASIC1.3□□□□□ -2.2
CCL20P78556 RPL18AP17-201ENST00000455326 198 ntBASIC1.3□□□□□ -2.2
CCL20P78556 AC008481.1-201ENST00000463278 396 ntBASIC1.3□□□□□ -2.2
CCL20P78556 AC004924.1-201ENST00000480160 781 ntBASIC1.3□□□□□ -2.2
CCL20P78556 AC018437.1-201ENST00000492214 406 ntBASIC1.3□□□□□ -2.2
CCL20P78556 AC020699.1-201ENST00000505161 445 ntBASIC1.3□□□□□ -2.2
CCL20P78556 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC1.3□□□□□ -2.2
CCL20P78556 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.3□□□□□ -2.2
CCL20P78556 RNU6-581P-201ENST00000516214 105 ntBASIC1.3□□□□□ -2.2
CCL20P78556 RNU6-1225P-201ENST00000516336 65 ntBASIC1.3□□□□□ -2.2
CCL20P78556 AC104417.1-201ENST00000523974 751 ntBASIC1.3□□□□□ -2.2
CCL20P78556 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.3□□□□□ -2.2
CCL20P78556 AC009097.3-201ENST00000563557 1018 ntBASIC1.3□□□□□ -2.2
CCL20P78556 AC012213.3-201ENST00000577199 777 ntBASIC1.3□□□□□ -2.2
CCL20P78556 AL161798.1-201ENST00000604630 131 ntBASIC1.3□□□□□ -2.2
CCL20P78556 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC1.3□□□□□ -2.2
CCL20P78556 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC1.3□□□□□ -2.2
CCL20P78556 AC104454.1-201ENST00000421341 1401 ntBASIC1.3□□□□□ -2.2
CCL20P78556 AP005901.5-201ENST00000545779 1796 ntBASIC1.29□□□□□ -2.2
CCL20P78556 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.29□□□□□ -2.2
CCL20P78556 SNORA25B-201ENST00000365507 128 ntBASIC1.29□□□□□ -2.2
CCL20P78556 MIR9-3-201ENST00000385084 90 ntBASIC1.29□□□□□ -2.2
CCL20P78556 RNA5SP171-201ENST00000391071 115 ntBASIC1.29□□□□□ -2.2
CCL20P78556 MIR1302-8-201ENST00000408342 128 ntBASIC1.29□□□□□ -2.2
CCL20P78556 AC078974.1-201ENST00000411597 223 ntBASIC1.29□□□□□ -2.2
CCL20P78556 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC1.29□□□□□ -2.2
CCL20P78556 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC1.29□□□□□ -2.2
CCL20P78556 UBE2D3P3-201ENST00000426992 425 ntBASIC1.29□□□□□ -2.2
CCL20P78556 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC1.29□□□□□ -2.2
CCL20P78556 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC1.29□□□□□ -2.2
CCL20P78556 MTATP6P30-201ENST00000443540 664 ntBASIC1.29□□□□□ -2.2
CCL20P78556 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC1.29□□□□□ -2.2
CCL20P78556 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC1.29□□□□□ -2.2
CCL20P78556 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.29□□□□□ -2.2
CCL20P78556 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.29□□□□□ -2.2
CCL20P78556 RPL37P6-201ENST00000460682 294 ntBASIC1.29□□□□□ -2.2
CCL20P78556 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
CCL20P78556 AC104685.1-201ENST00000502445 371 ntBASIC1.29□□□□□ -2.2
CCL20P78556 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC1.29□□□□□ -2.2
CCL20P78556 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC1.29□□□□□ -2.2
CCL20P78556 AKIRIN2P1-201ENST00000505898 352 ntBASIC1.29□□□□□ -2.2
CCL20P78556 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC1.29□□□□□ -2.2
CCL20P78556 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC1.29□□□□□ -2.2
CCL20P78556 AC027338.1-201ENST00000514840 825 ntBASIC1.29□□□□□ -2.2
CCL20P78556 RNU6-703P-201ENST00000516946 107 ntBASIC1.29□□□□□ -2.2
CCL20P78556 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC1.29□□□□□ -2.2
CCL20P78556 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.29□□□□□ -2.2
CCL20P78556 SNRPGP1-201ENST00000553864 222 ntBASIC1.29□□□□□ -2.2
CCL20P78556 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.29□□□□□ -2.2
CCL20P78556 AC069545.1-201ENST00000605671 358 ntBASIC1.29□□□□□ -2.2
CCL20P78556 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
CCL20P78556 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
CCL20P78556 AL356094.1-201ENST00000624663 1212 ntBASIC1.29□□□□□ -2.2
CCL20P78556 Z99571.1-201ENST00000636677 394 ntBASIC1.29□□□□□ -2.2
CCL20P78556 AL589826.1-201ENST00000340697 249 ntBASIC1.28□□□□□ -2.2
CCL20P78556 SNORA8-201ENST00000384574 139 ntBASIC1.28□□□□□ -2.2
CCL20P78556 MIR561-201ENST00000385216 97 ntBASIC1.28□□□□□ -2.2
CCL20P78556 MIR320A-201ENST00000385302 82 ntBASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms