Protein–RNA interactions for Protein: P59942

MCCD1, Mitochondrial coiled-coil domain protein 1, humanhuman

Predicted RBP Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MCCD1P59942 AC132825.6-201ENST00000638861 357 ntBASIC5.23□□□□□ -1.57
MCCD1P59942 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC5.23□□□□□ -1.57
MCCD1P59942 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
MCCD1P59942 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
MCCD1P59942 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.22□□□□□ -1.57
MCCD1P59942 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
MCCD1P59942 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC5.22□□□□□ -1.57
MCCD1P59942 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
MCCD1P59942 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
MCCD1P59942 Y_RNA.44-201ENST00000362676 108 ntBASIC5.22□□□□□ -1.57
MCCD1P59942 RNU6-78P-201ENST00000362897 107 ntBASIC5.22□□□□□ -1.57
MCCD1P59942 RNU4-9P-201ENST00000364951 139 ntBASIC5.22□□□□□ -1.57
MCCD1P59942 MIR32-201ENST00000384965 70 ntBASIC5.22□□□□□ -1.57
MCCD1P59942 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.22□□□□□ -1.57
MCCD1P59942 AL590762.2-201ENST00000395798 571 ntBASIC5.22□□□□□ -1.57
MCCD1P59942 UBA52P6-201ENST00000399822 382 ntBASIC5.22□□□□□ -1.57
MCCD1P59942 MIR548I2-201ENST00000408348 149 ntBASIC5.22□□□□□ -1.57
MCCD1P59942 RNU2-68P-201ENST00000410878 191 ntBASIC5.22□□□□□ -1.57
MCCD1P59942 AC244098.2-201ENST00000422068 99 ntBASIC5.22□□□□□ -1.57
MCCD1P59942 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC5.22□□□□□ -1.57
MCCD1P59942 AC016700.2-201ENST00000446011 156 ntBASIC5.22□□□□□ -1.57
MCCD1P59942 HMGN2P21-201ENST00000447764 270 ntBASIC5.22□□□□□ -1.57
MCCD1P59942 HSPE1P25-201ENST00000455484 251 ntBASIC5.22□□□□□ -1.57
MCCD1P59942 AC078817.1-201ENST00000492623 435 ntBASIC5.22□□□□□ -1.57
MCCD1P59942 RNU6-1278P-201ENST00000516130 107 ntBASIC5.22□□□□□ -1.57
MCCD1P59942 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.22□□□□□ -1.57
MCCD1P59942 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC5.22□□□□□ -1.57
MCCD1P59942 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC5.22□□□□□ -1.57
MCCD1P59942 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC5.22□□□□□ -1.57
MCCD1P59942 AC093249.4-201ENST00000564755 259 ntBASIC5.22□□□□□ -1.57
MCCD1P59942 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC5.22□□□□□ -1.57
MCCD1P59942 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC5.22□□□□□ -1.57
MCCD1P59942 SDR42E1P1-201ENST00000611327 477 ntBASIC5.22□□□□□ -1.57
MCCD1P59942 AL355480.1-201ENST00000629041 99 ntBASIC5.22□□□□□ -1.57
MCCD1P59942 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
MCCD1P59942 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC5.22□□□□□ -1.57
MCCD1P59942 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
MCCD1P59942 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.22□□□□□ -1.57
MCCD1P59942 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
MCCD1P59942 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
MCCD1P59942 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
MCCD1P59942 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
MCCD1P59942 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
MCCD1P59942 AL360270.2-201ENST00000562952 5985 ntBASIC5.21□□□□□ -1.58
MCCD1P59942 RNU6-968P-201ENST00000384076 107 ntBASIC5.21□□□□□ -1.58
MCCD1P59942 SNORA53-201ENST00000391141 249 ntBASIC5.21□□□□□ -1.58
MCCD1P59942 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
MCCD1P59942 RNU4-30P-201ENST00000410245 143 ntBASIC5.21□□□□□ -1.58
MCCD1P59942 Y_RNA.626-201ENST00000411288 95 ntBASIC5.21□□□□□ -1.58
MCCD1P59942 RPL17P36-201ENST00000420302 549 ntBASIC5.21□□□□□ -1.58
MCCD1P59942 AC124916.1-201ENST00000444020 547 ntBASIC5.21□□□□□ -1.58
MCCD1P59942 AC112498.1-201ENST00000444401 332 ntBASIC5.21□□□□□ -1.58
MCCD1P59942 RPL23AP75-201ENST00000491601 451 ntBASIC5.21□□□□□ -1.58
MCCD1P59942 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC5.21□□□□□ -1.58
MCCD1P59942 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
MCCD1P59942 RNA5SP291-201ENST00000517222 105 ntBASIC5.21□□□□□ -1.58
MCCD1P59942 BNIP3P1-201ENST00000547295 580 ntBASIC5.21□□□□□ -1.58
MCCD1P59942 MIR4646-201ENST00000580775 63 ntBASIC5.21□□□□□ -1.58
MCCD1P59942 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC5.21□□□□□ -1.58
MCCD1P59942 AL391358.1-201ENST00000605342 190 ntBASIC5.21□□□□□ -1.58
MCCD1P59942 CCT5-215ENST00000625723 135 ntTSL 5 BASIC5.21□□□□□ -1.58
MCCD1P59942 AL079305.1-201ENST00000623159 3008 ntBASIC5.21□□□□□ -1.58
MCCD1P59942 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
MCCD1P59942 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
MCCD1P59942 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
MCCD1P59942 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.21□□□□□ -1.58
MCCD1P59942 AC116096.1-201ENST00000566804 2314 ntBASIC5.2□□□□□ -1.58
MCCD1P59942 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.2□□□□□ -1.58
MCCD1P59942 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
MCCD1P59942 RNA5SP189-201ENST00000364920 115 ntBASIC5.2□□□□□ -1.58
MCCD1P59942 RNA5SP87-201ENST00000384155 118 ntBASIC5.2□□□□□ -1.58
MCCD1P59942 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
MCCD1P59942 RN7SKP100-201ENST00000411258 284 ntBASIC5.2□□□□□ -1.58
MCCD1P59942 TOMM22P1-201ENST00000418578 312 ntBASIC5.2□□□□□ -1.58
MCCD1P59942 AL358453.1-201ENST00000422522 250 ntBASIC5.2□□□□□ -1.58
MCCD1P59942 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC5.2□□□□□ -1.58
MCCD1P59942 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC5.2□□□□□ -1.58
MCCD1P59942 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC5.2□□□□□ -1.58
MCCD1P59942 AL451050.1-201ENST00000450126 415 ntBASIC5.2□□□□□ -1.58
MCCD1P59942 AC109925.1-201ENST00000478069 331 ntBASIC5.2□□□□□ -1.58
MCCD1P59942 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC5.2□□□□□ -1.58
MCCD1P59942 RPL23AP49-201ENST00000492925 468 ntBASIC5.2□□□□□ -1.58
MCCD1P59942 UBE2Q2P8-201ENST00000560644 102 ntBASIC5.2□□□□□ -1.58
MCCD1P59942 MIR3921-201ENST00000577308 85 ntBASIC5.2□□□□□ -1.58
MCCD1P59942 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC5.2□□□□□ -1.58
MCCD1P59942 MIR4737-201ENST00000583979 81 ntBASIC5.2□□□□□ -1.58
MCCD1P59942 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC5.2□□□□□ -1.58
MCCD1P59942 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
MCCD1P59942 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
MCCD1P59942 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
MCCD1P59942 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
MCCD1P59942 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
MCCD1P59942 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC5.2□□□□□ -1.58
MCCD1P59942 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.2□□□□□ -1.58
MCCD1P59942 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.19□□□□□ -1.58
MCCD1P59942 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.19□□□□□ -1.58
MCCD1P59942 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
MCCD1P59942 AC135776.4-201ENST00000624300 1904 ntBASIC5.19□□□□□ -1.58
MCCD1P59942 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
MCCD1P59942 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms