Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 DUXAP1-201ENST00000556632 463 ntBASIC2.08□□□□□ -2.08
VSX2P58304 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC2.08□□□□□ -2.08
VSX2P58304 AL049838.1-201ENST00000563647 981 ntBASIC2.08□□□□□ -2.08
VSX2P58304 MIR4293-201ENST00000584305 78 ntBASIC2.08□□□□□ -2.08
VSX2P58304 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC2.08□□□□□ -2.08
VSX2P58304 AC239868.4-201ENST00000608318 671 ntBASIC2.08□□□□□ -2.08
VSX2P58304 AL391813.2-201ENST00000609113 322 ntBASIC2.08□□□□□ -2.08
VSX2P58304 HMGB1P24-202ENST00000615653 685 ntBASIC2.08□□□□□ -2.08
VSX2P58304 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.08□□□□□ -2.08
VSX2P58304 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.08□□□□□ -2.08
VSX2P58304 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
VSX2P58304 MIRLET7G-201ENST00000362280 84 ntBASIC2.07□□□□□ -2.08
VSX2P58304 RNU6-778P-201ENST00000363269 103 ntBASIC2.07□□□□□ -2.08
VSX2P58304 RNU6-512P-201ENST00000364438 103 ntBASIC2.07□□□□□ -2.08
VSX2P58304 SNORA51.11-201ENST00000384442 131 ntBASIC2.07□□□□□ -2.08
VSX2P58304 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.07□□□□□ -2.08
VSX2P58304 AC078974.1-201ENST00000411597 223 ntBASIC2.07□□□□□ -2.08
VSX2P58304 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.07□□□□□ -2.08
VSX2P58304 MTCO2P21-201ENST00000419780 677 ntBASIC2.07□□□□□ -2.08
VSX2P58304 AC005094.1-201ENST00000440420 368 ntBASIC2.07□□□□□ -2.08
VSX2P58304 IPO7P1-201ENST00000442031 636 ntBASIC2.07□□□□□ -2.08
VSX2P58304 COX6CP12-201ENST00000446748 202 ntBASIC2.07□□□□□ -2.08
VSX2P58304 RNU7-26P-201ENST00000458980 63 ntBASIC2.07□□□□□ -2.08
VSX2P58304 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
VSX2P58304 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.07□□□□□ -2.08
VSX2P58304 AC139453.3-201ENST00000493276 369 ntBASIC2.07□□□□□ -2.08
VSX2P58304 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.07□□□□□ -2.08
VSX2P58304 RNA5SP165-201ENST00000517142 115 ntBASIC2.07□□□□□ -2.08
VSX2P58304 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC2.07□□□□□ -2.08
VSX2P58304 COX6CP5-201ENST00000527162 228 ntBASIC2.07□□□□□ -2.08
VSX2P58304 AC013828.2-201ENST00000532487 235 ntBASIC2.07□□□□□ -2.08
VSX2P58304 VBP1-203ENST00000535916 944 ntTSL 2 BASIC2.07□□□□□ -2.08
VSX2P58304 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC2.07□□□□□ -2.08
VSX2P58304 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC2.07□□□□□ -2.08
VSX2P58304 MTND1P8-201ENST00000571424 950 ntBASIC2.07□□□□□ -2.08
VSX2P58304 VN1R82P-201ENST00000601481 356 ntBASIC2.07□□□□□ -2.08
VSX2P58304 AC013244.3-201ENST00000605614 388 ntBASIC2.07□□□□□ -2.08
VSX2P58304 RNU6-88P-201ENST00000606801 100 ntBASIC2.07□□□□□ -2.08
VSX2P58304 AL136370.1-201ENST00000608166 691 ntBASIC2.07□□□□□ -2.08
VSX2P58304 AC072039.2-201ENST00000608883 439 ntBASIC2.07□□□□□ -2.08
VSX2P58304 AL359757.2-201ENST00000624309 274 ntBASIC2.07□□□□□ -2.08
VSX2P58304 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.07□□□□□ -2.08
VSX2P58304 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
VSX2P58304 MTND4P16-201ENST00000466108 1367 ntBASIC2.07□□□□□ -2.08
VSX2P58304 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.06□□□□□ -2.08
VSX2P58304 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
VSX2P58304 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
VSX2P58304 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC2.06□□□□□ -2.08
VSX2P58304 RNU6-1167P-201ENST00000363227 94 ntBASIC2.06□□□□□ -2.08
VSX2P58304 Y_RNA.245-201ENST00000364493 95 ntBASIC2.06□□□□□ -2.08
VSX2P58304 SNORA6-201ENST00000384033 151 ntBASIC2.06□□□□□ -2.08
VSX2P58304 SNORA64-201ENST00000384674 134 ntBASIC2.06□□□□□ -2.08
VSX2P58304 RNU6-750P-201ENST00000390946 107 ntBASIC2.06□□□□□ -2.08
VSX2P58304 AL359634.1-202ENST00000404721 284 ntBASIC2.06□□□□□ -2.08
VSX2P58304 VPS26BP1-201ENST00000417155 755 ntBASIC2.06□□□□□ -2.08
VSX2P58304 AL109913.1-201ENST00000421173 514 ntBASIC2.06□□□□□ -2.08
VSX2P58304 MTND1P20-201ENST00000430341 950 ntBASIC2.06□□□□□ -2.08
VSX2P58304 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.06□□□□□ -2.08
VSX2P58304 MTND1P32-201ENST00000433043 938 ntBASIC2.06□□□□□ -2.08
VSX2P58304 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC2.06□□□□□ -2.08
VSX2P58304 HMGB3P12-201ENST00000438745 556 ntBASIC2.06□□□□□ -2.08
VSX2P58304 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC2.06□□□□□ -2.08
VSX2P58304 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC2.06□□□□□ -2.08
VSX2P58304 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.06□□□□□ -2.08
VSX2P58304 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC2.06□□□□□ -2.08
VSX2P58304 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC2.06□□□□□ -2.08
VSX2P58304 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC2.06□□□□□ -2.08
VSX2P58304 LTV1P1-201ENST00000510683 1237 ntBASIC2.06□□□□□ -2.08
VSX2P58304 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
VSX2P58304 SNORA31.6-201ENST00000516241 130 ntBASIC2.06□□□□□ -2.08
VSX2P58304 SCARNA16.3-201ENST00000516595 184 ntBASIC2.06□□□□□ -2.08
VSX2P58304 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
VSX2P58304 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.06□□□□□ -2.08
VSX2P58304 BNIP3P23-201ENST00000599655 511 ntBASIC2.06□□□□□ -2.08
VSX2P58304 AC098826.3-201ENST00000603823 466 ntBASIC2.06□□□□□ -2.08
VSX2P58304 AL161798.1-201ENST00000604630 131 ntBASIC2.06□□□□□ -2.08
VSX2P58304 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
VSX2P58304 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
VSX2P58304 AC009090.3-201ENST00000616553 565 ntBASIC2.06□□□□□ -2.08
VSX2P58304 AL607023.1-201ENST00000620045 248 ntBASIC2.06□□□□□ -2.08
VSX2P58304 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.06□□□□□ -2.08
VSX2P58304 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC2.06□□□□□ -2.08
VSX2P58304 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
VSX2P58304 ZNF876P-202ENST00000398732 1485 ntBASIC2.06□□□□□ -2.08
VSX2P58304 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
VSX2P58304 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
VSX2P58304 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
VSX2P58304 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.05□□□□□ -2.08
VSX2P58304 RNA5SP88-201ENST00000365560 109 ntBASIC2.05□□□□□ -2.08
VSX2P58304 SNORA67.3-201ENST00000384366 140 ntBASIC2.05□□□□□ -2.08
VSX2P58304 RNU6-14P-201ENST00000384630 106 ntBASIC2.05□□□□□ -2.08
VSX2P58304 RNU6-253P-201ENST00000384730 105 ntBASIC2.05□□□□□ -2.08
VSX2P58304 MIR504-201ENST00000385065 83 ntBASIC2.05□□□□□ -2.08
VSX2P58304 MIR513B-201ENST00000385136 84 ntBASIC2.05□□□□□ -2.08
VSX2P58304 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
VSX2P58304 MIR1305-201ENST00000408300 86 ntBASIC2.05□□□□□ -2.08
VSX2P58304 LARP1BP3-201ENST00000437229 869 ntBASIC2.05□□□□□ -2.08
VSX2P58304 ZNF736P11Y-201ENST00000442535 1213 ntBASIC2.05□□□□□ -2.08
VSX2P58304 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC2.05□□□□□ -2.08
VSX2P58304 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 140.9 ms