Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 AC108078.2-201ENST00000510750 236 ntBASIC3.65□□□□□ -1.83
COPB1P53618 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.65□□□□□ -1.83
COPB1P53618 RNU6-685P-201ENST00000517088 95 ntBASIC3.65□□□□□ -1.83
COPB1P53618 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.65□□□□□ -1.83
COPB1P53618 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.65□□□□□ -1.83
COPB1P53618 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
COPB1P53618 AC243972.3-201ENST00000539655 198 ntBASIC3.65□□□□□ -1.83
COPB1P53618 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.65□□□□□ -1.83
COPB1P53618 PSMA3P-201ENST00000555485 635 ntBASIC3.65□□□□□ -1.83
COPB1P53618 OR4H12P-201ENST00000556269 907 ntBASIC3.65□□□□□ -1.83
COPB1P53618 AC008521.1-201ENST00000587471 187 ntBASIC3.65□□□□□ -1.83
COPB1P53618 AC013553.2-201ENST00000604244 589 ntBASIC3.65□□□□□ -1.83
COPB1P53618 SNORD39.4-201ENST00000620099 78 ntBASIC3.65□□□□□ -1.83
COPB1P53618 AC005858.4-201ENST00000623191 700 ntBASIC3.65□□□□□ -1.83
COPB1P53618 MIR4275-201ENST00000636486 87 ntBASIC3.65□□□□□ -1.83
COPB1P53618 U6.98-201ENST00000637157 84 ntBASIC3.65□□□□□ -1.83
COPB1P53618 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.65□□□□□ -1.83
COPB1P53618 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
COPB1P53618 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.65□□□□□ -1.83
COPB1P53618 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
COPB1P53618 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
COPB1P53618 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
COPB1P53618 SRP72P2-201ENST00000344851 1979 ntBASIC3.65□□□□□ -1.83
COPB1P53618 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
COPB1P53618 AC103710.2-202ENST00000641454 2853 ntBASIC3.65□□□□□ -1.83
COPB1P53618 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.65□□□□□ -1.83
COPB1P53618 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC3.65□□□□□ -1.83
COPB1P53618 MTND5P1-201ENST00000445440 1375 ntBASIC3.64□□□□□ -1.83
COPB1P53618 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.64□□□□□ -1.83
COPB1P53618 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.64□□□□□ -1.83
COPB1P53618 RNU4-35P-201ENST00000362588 141 ntBASIC3.64□□□□□ -1.83
COPB1P53618 RNU4-73P-201ENST00000363164 141 ntBASIC3.64□□□□□ -1.83
COPB1P53618 U3.12-201ENST00000364498 214 ntBASIC3.64□□□□□ -1.83
COPB1P53618 Y_RNA.356-201ENST00000365475 113 ntBASIC3.64□□□□□ -1.83
COPB1P53618 Y_RNA.535-201ENST00000384612 99 ntBASIC3.64□□□□□ -1.83
COPB1P53618 MIR491-201ENST00000384877 84 ntBASIC3.64□□□□□ -1.83
COPB1P53618 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.64□□□□□ -1.83
COPB1P53618 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC3.64□□□□□ -1.83
COPB1P53618 RN7SKP32-201ENST00000410167 303 ntBASIC3.64□□□□□ -1.83
COPB1P53618 RNU2-37P-201ENST00000410695 177 ntBASIC3.64□□□□□ -1.83
COPB1P53618 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC3.64□□□□□ -1.83
COPB1P53618 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.64□□□□□ -1.83
COPB1P53618 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.64□□□□□ -1.83
COPB1P53618 RPL35AP12-201ENST00000425362 338 ntBASIC3.64□□□□□ -1.83
COPB1P53618 AC079780.1-201ENST00000428259 207 ntBASIC3.64□□□□□ -1.83
COPB1P53618 AL121871.1-201ENST00000443413 436 ntBASIC3.64□□□□□ -1.83
COPB1P53618 RPL7P12-201ENST00000446719 750 ntBASIC3.64□□□□□ -1.83
COPB1P53618 HMGB3P30-201ENST00000457863 606 ntBASIC3.64□□□□□ -1.83
COPB1P53618 AC092451.1-201ENST00000480211 153 ntBASIC3.64□□□□□ -1.83
COPB1P53618 RPL21P99-201ENST00000480369 423 ntBASIC3.64□□□□□ -1.83
COPB1P53618 AC117522.3-201ENST00000507974 584 ntBASIC3.64□□□□□ -1.83
COPB1P53618 Y_RNA.665-201ENST00000516177 98 ntBASIC3.64□□□□□ -1.83
COPB1P53618 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.64□□□□□ -1.83
COPB1P53618 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC3.64□□□□□ -1.83
COPB1P53618 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.64□□□□□ -1.83
COPB1P53618 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
COPB1P53618 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
COPB1P53618 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.64□□□□□ -1.83
COPB1P53618 AL118558.2-201ENST00000556294 238 ntBASIC3.64□□□□□ -1.83
COPB1P53618 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.64□□□□□ -1.83
COPB1P53618 AC096577.2-201ENST00000611455 153 ntBASIC3.64□□□□□ -1.83
COPB1P53618 AC091953.5-201ENST00000622919 233 ntBASIC3.64□□□□□ -1.83
COPB1P53618 U6.114-201ENST00000636407 96 ntBASIC3.64□□□□□ -1.83
COPB1P53618 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.64□□□□□ -1.83
COPB1P53618 MTCO1P12-201ENST00000414273 1543 ntBASIC3.64□□□□□ -1.83
COPB1P53618 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.64□□□□□ -1.83
COPB1P53618 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
COPB1P53618 AC073346.2-201ENST00000624724 2058 ntBASIC3.63□□□□□ -1.83
COPB1P53618 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
COPB1P53618 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
COPB1P53618 Y_RNA.167-201ENST00000363735 109 ntBASIC3.63□□□□□ -1.83
COPB1P53618 RNU6-1074P-201ENST00000383995 104 ntBASIC3.63□□□□□ -1.83
COPB1P53618 RNU6-14P-201ENST00000384630 106 ntBASIC3.63□□□□□ -1.83
COPB1P53618 SNORD37.1-201ENST00000390968 65 ntBASIC3.63□□□□□ -1.83
COPB1P53618 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.63□□□□□ -1.83
COPB1P53618 NDUFS5P1-201ENST00000405668 289 ntBASIC3.63□□□□□ -1.83
COPB1P53618 AL606923.1-201ENST00000406616 190 ntBASIC3.63□□□□□ -1.83
COPB1P53618 RNU6-387P-201ENST00000411331 105 ntBASIC3.63□□□□□ -1.83
COPB1P53618 AC007390.1-201ENST00000415722 356 ntBASIC3.63□□□□□ -1.83
COPB1P53618 SYF2P2-201ENST00000417620 583 ntBASIC3.63□□□□□ -1.83
COPB1P53618 TOMM22P1-201ENST00000418578 312 ntBASIC3.63□□□□□ -1.83
COPB1P53618 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC3.63□□□□□ -1.83
COPB1P53618 AL353678.1-201ENST00000422735 741 ntBASIC3.63□□□□□ -1.83
COPB1P53618 RPL7P46-201ENST00000425129 740 ntBASIC3.63□□□□□ -1.83
COPB1P53618 HSPD1P21-201ENST00000436541 245 ntBASIC3.63□□□□□ -1.83
COPB1P53618 IFNA20P-201ENST00000436840 528 ntBASIC3.63□□□□□ -1.83
COPB1P53618 CST9LP2-201ENST00000437612 320 ntBASIC3.63□□□□□ -1.83
COPB1P53618 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.63□□□□□ -1.83
COPB1P53618 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.63□□□□□ -1.83
COPB1P53618 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC3.63□□□□□ -1.83
COPB1P53618 CCDC34P1-201ENST00000507441 517 ntBASIC3.63□□□□□ -1.83
COPB1P53618 RBBP4P6-201ENST00000508098 202 ntBASIC3.63□□□□□ -1.83
COPB1P53618 AC104806.1-201ENST00000508720 308 ntBASIC3.63□□□□□ -1.83
COPB1P53618 FCF1P8-201ENST00000510322 597 ntBASIC3.63□□□□□ -1.83
COPB1P53618 TTC39CP1-201ENST00000512513 755 ntBASIC3.63□□□□□ -1.83
COPB1P53618 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.63□□□□□ -1.83
COPB1P53618 RNU7-30P-201ENST00000516835 62 ntBASIC3.63□□□□□ -1.83
COPB1P53618 AC068657.1-201ENST00000520807 306 ntBASIC3.63□□□□□ -1.83
COPB1P53618 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.63□□□□□ -1.83
COPB1P53618 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 130.6 ms