Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
CLCNKAP51800 AC092435.3-201ENST00000565538 3654 ntBASIC3.18□□□□□ -1.9
CLCNKAP51800 RNU6-1322P-201ENST00000364309 107 ntBASIC3.18□□□□□ -1.9
CLCNKAP51800 RNU4-48P-201ENST00000365559 182 ntBASIC3.18□□□□□ -1.9
CLCNKAP51800 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC3.18□□□□□ -1.9
CLCNKAP51800 MIR491-201ENST00000384877 84 ntBASIC3.18□□□□□ -1.9
CLCNKAP51800 MIR454-201ENST00000390180 115 ntBASIC3.18□□□□□ -1.9
CLCNKAP51800 UBE2V1P2-201ENST00000397758 440 ntBASIC3.18□□□□□ -1.9
CLCNKAP51800 RPS4XP3-201ENST00000398541 413 ntBASIC3.18□□□□□ -1.9
CLCNKAP51800 MIR1277-201ENST00000408536 78 ntBASIC3.18□□□□□ -1.9
CLCNKAP51800 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.18□□□□□ -1.9
CLCNKAP51800 MRPL50P2-201ENST00000416821 482 ntBASIC3.18□□□□□ -1.9
CLCNKAP51800 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.18□□□□□ -1.9
CLCNKAP51800 AL451054.2-201ENST00000420896 202 ntBASIC3.18□□□□□ -1.9
CLCNKAP51800 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC3.18□□□□□ -1.9
CLCNKAP51800 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.18□□□□□ -1.9
CLCNKAP51800 MTND1P2-201ENST00000430604 821 ntBASIC3.18□□□□□ -1.9
CLCNKAP51800 RPL23AP22-201ENST00000437556 453 ntBASIC3.18□□□□□ -1.9
CLCNKAP51800 RBMX2P4-201ENST00000441256 376 ntBASIC3.18□□□□□ -1.9
CLCNKAP51800 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC3.18□□□□□ -1.9
CLCNKAP51800 RNU7-63P-201ENST00000459054 62 ntBASIC3.18□□□□□ -1.9
CLCNKAP51800 AC091179.1-201ENST00000461606 579 ntBASIC3.18□□□□□ -1.9
CLCNKAP51800 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.18□□□□□ -1.9
CLCNKAP51800 RPL7P5-201ENST00000471472 736 ntBASIC3.18□□□□□ -1.9
CLCNKAP51800 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC3.18□□□□□ -1.9
CLCNKAP51800 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC3.18□□□□□ -1.9
CLCNKAP51800 RN7SKP57-201ENST00000517248 293 ntBASIC3.18□□□□□ -1.9
CLCNKAP51800 NRON-201ENST00000517270 370 ntBASIC3.18□□□□□ -1.9
CLCNKAP51800 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.18□□□□□ -1.9
CLCNKAP51800 MTND1P35-201ENST00000526739 508 ntBASIC3.18□□□□□ -1.9
CLCNKAP51800 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC3.18□□□□□ -1.9
CLCNKAP51800 AC109635.3-201ENST00000529536 185 ntBASIC3.18□□□□□ -1.9
CLCNKAP51800 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.18□□□□□ -1.9
CLCNKAP51800 OR5AL2P-201ENST00000532185 920 ntBASIC3.18□□□□□ -1.9
CLCNKAP51800 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC3.18□□□□□ -1.9
CLCNKAP51800 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.18□□□□□ -1.9
CLCNKAP51800 DNAJC8P1-201ENST00000554535 372 ntBASIC3.18□□□□□ -1.9
CLCNKAP51800 AL157687.1-201ENST00000554853 619 ntBASIC3.18□□□□□ -1.9
CLCNKAP51800 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.18□□□□□ -1.9
CLCNKAP51800 SNORA59B-202ENST00000578183 701 ntBASIC3.18□□□□□ -1.9
CLCNKAP51800 MIR2682-201ENST00000580305 110 ntBASIC3.18□□□□□ -1.9
CLCNKAP51800 AC006504.3-201ENST00000586818 523 ntBASIC3.18□□□□□ -1.9
CLCNKAP51800 AC012493.2-201ENST00000595083 291 ntBASIC3.18□□□□□ -1.9
CLCNKAP51800 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.18□□□□□ -1.9
CLCNKAP51800 MIR1321-201ENST00000637766 79 ntBASIC3.18□□□□□ -1.9
CLCNKAP51800 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.18□□□□□ -1.9
CLCNKAP51800 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.18□□□□□ -1.9
CLCNKAP51800 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.17□□□□□ -1.9
CLCNKAP51800 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CLCNKAP51800 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.17□□□□□ -1.9
CLCNKAP51800 RNU6-946P-201ENST00000383878 107 ntBASIC3.17□□□□□ -1.9
CLCNKAP51800 Y_RNA.481-201ENST00000384373 102 ntBASIC3.17□□□□□ -1.9
CLCNKAP51800 RNU6-606P-201ENST00000384721 111 ntBASIC3.17□□□□□ -1.9
CLCNKAP51800 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.17□□□□□ -1.9
CLCNKAP51800 RNA5SP31-201ENST00000411144 127 ntBASIC3.17□□□□□ -1.9
CLCNKAP51800 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.17□□□□□ -1.9
CLCNKAP51800 OR51A5P-201ENST00000415429 942 ntBASIC3.17□□□□□ -1.9
CLCNKAP51800 AC012498.1-201ENST00000424037 437 ntBASIC3.17□□□□□ -1.9
CLCNKAP51800 CST9LP2-201ENST00000437612 320 ntBASIC3.17□□□□□ -1.9
CLCNKAP51800 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.17□□□□□ -1.9
CLCNKAP51800 AC016691.1-201ENST00000441321 413 ntBASIC3.17□□□□□ -1.9
CLCNKAP51800 NEFMP1-201ENST00000443423 1006 ntBASIC3.17□□□□□ -1.9
CLCNKAP51800 NFU1P2-201ENST00000448700 469 ntBASIC3.17□□□□□ -1.9
CLCNKAP51800 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC3.17□□□□□ -1.9
CLCNKAP51800 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC3.17□□□□□ -1.9
CLCNKAP51800 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC3.17□□□□□ -1.9
CLCNKAP51800 CACYBPP2-201ENST00000453625 678 ntBASIC3.17□□□□□ -1.9
CLCNKAP51800 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3.17□□□□□ -1.9
CLCNKAP51800 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC3.17□□□□□ -1.9
CLCNKAP51800 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC3.17□□□□□ -1.9
CLCNKAP51800 AC083798.1-201ENST00000472671 131 ntBASIC3.17□□□□□ -1.9
CLCNKAP51800 RPL36AP51-201ENST00000487216 318 ntBASIC3.17□□□□□ -1.9
CLCNKAP51800 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC3.17□□□□□ -1.9
CLCNKAP51800 AC108078.2-201ENST00000510750 236 ntBASIC3.17□□□□□ -1.9
CLCNKAP51800 SNORA40.12-201ENST00000516329 111 ntBASIC3.17□□□□□ -1.9
CLCNKAP51800 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC3.17□□□□□ -1.9
CLCNKAP51800 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.17□□□□□ -1.9
CLCNKAP51800 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC3.17□□□□□ -1.9
CLCNKAP51800 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC3.17□□□□□ -1.9
CLCNKAP51800 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC3.17□□□□□ -1.9
CLCNKAP51800 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC3.17□□□□□ -1.9
CLCNKAP51800 AC234778.2-201ENST00000566241 354 ntBASIC3.17□□□□□ -1.9
CLCNKAP51800 AC055876.1-202ENST00000567053 138 ntBASIC3.17□□□□□ -1.9
CLCNKAP51800 AP000907.4-201ENST00000604143 237 ntBASIC3.17□□□□□ -1.9
CLCNKAP51800 AP002826.1-201ENST00000608835 315 ntBASIC3.17□□□□□ -1.9
CLCNKAP51800 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CLCNKAP51800 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC3.17□□□□□ -1.9
CLCNKAP51800 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC3.17□□□□□ -1.9
CLCNKAP51800 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC3.17□□□□□ -1.9
CLCNKAP51800 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.17□□□□□ -1.9
CLCNKAP51800 AC004972.1-201ENST00000623934 2209 ntBASIC3.17□□□□□ -1.9
CLCNKAP51800 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
CLCNKAP51800 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.17□□□□□ -1.9
CLCNKAP51800 SDAD1P2-201ENST00000441308 2028 ntBASIC3.17□□□□□ -1.9
CLCNKAP51800 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
CLCNKAP51800 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CLCNKAP51800 Y_RNA.38-201ENST00000362617 102 ntBASIC3.16□□□□□ -1.9
CLCNKAP51800 Y_RNA.89-201ENST00000363031 102 ntBASIC3.16□□□□□ -1.9
CLCNKAP51800 RNU6-179P-201ENST00000363350 107 ntBASIC3.16□□□□□ -1.9
CLCNKAP51800 RNU6-61P-201ENST00000365528 109 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 114.1 ms