Protein–RNA interactions for Protein: P43489

TNFRSF4, Tumor necrosis factor receptor superfamily member 4, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4P43489 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.67□□□□□ -1.98
TNFRSF4P43489 AL670379.6-201ENST00000603753 252 ntBASIC2.67□□□□□ -1.98
TNFRSF4P43489 AL670379.11-201ENST00000604059 253 ntBASIC2.67□□□□□ -1.98
TNFRSF4P43489 AL161798.1-201ENST00000604630 131 ntBASIC2.67□□□□□ -1.98
TNFRSF4P43489 AC008162.1-201ENST00000604718 254 ntBASIC2.67□□□□□ -1.98
TNFRSF4P43489 AL670379.1-201ENST00000604752 252 ntBASIC2.67□□□□□ -1.98
TNFRSF4P43489 AL670379.5-201ENST00000605253 252 ntBASIC2.67□□□□□ -1.98
TNFRSF4P43489 AL670379.12-201ENST00000605291 253 ntBASIC2.67□□□□□ -1.98
TNFRSF4P43489 AL670379.8-201ENST00000605353 252 ntBASIC2.67□□□□□ -1.98
TNFRSF4P43489 AL670379.7-201ENST00000605823 252 ntBASIC2.67□□□□□ -1.98
TNFRSF4P43489 AC005046.1-201ENST00000608515 625 ntBASIC2.67□□□□□ -1.98
TNFRSF4P43489 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.67□□□□□ -1.98
TNFRSF4P43489 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC2.67□□□□□ -1.98
TNFRSF4P43489 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.67□□□□□ -1.98
TNFRSF4P43489 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
TNFRSF4P43489 AC009090.3-201ENST00000616553 565 ntBASIC2.67□□□□□ -1.98
TNFRSF4P43489 AC104010.1-201ENST00000616889 150 ntBASIC2.67□□□□□ -1.98
TNFRSF4P43489 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.67□□□□□ -1.98
TNFRSF4P43489 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.67□□□□□ -1.98
TNFRSF4P43489 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
TNFRSF4P43489 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.67□□□□□ -1.98
TNFRSF4P43489 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.67□□□□□ -1.98
TNFRSF4P43489 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
TNFRSF4P43489 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.67□□□□□ -1.98
TNFRSF4P43489 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.66□□□□□ -1.98
TNFRSF4P43489 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.66□□□□□ -1.98
TNFRSF4P43489 UBE2L2-201ENST00000254302 429 ntBASIC2.66□□□□□ -1.98
TNFRSF4P43489 SNORD62.1-201ENST00000362541 86 ntBASIC2.66□□□□□ -1.98
TNFRSF4P43489 RNY4P16-201ENST00000364768 94 ntBASIC2.66□□□□□ -1.98
TNFRSF4P43489 XGY1-201ENST00000381172 446 ntBASIC2.66□□□□□ -1.98
TNFRSF4P43489 RNU6-701P-201ENST00000384059 107 ntBASIC2.66□□□□□ -1.98
TNFRSF4P43489 MIR27B-201ENST00000385129 97 ntBASIC2.66□□□□□ -1.98
TNFRSF4P43489 SNORD115.1-201ENST00000391109 76 ntBASIC2.66□□□□□ -1.98
TNFRSF4P43489 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.66□□□□□ -1.98
TNFRSF4P43489 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.66□□□□□ -1.98
TNFRSF4P43489 GTF2IP20-201ENST00000431663 360 ntBASIC2.66□□□□□ -1.98
TNFRSF4P43489 GPM6BP2-201ENST00000432046 144 ntBASIC2.66□□□□□ -1.98
TNFRSF4P43489 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.66□□□□□ -1.98
TNFRSF4P43489 AL360221.1-201ENST00000445989 335 ntBASIC2.66□□□□□ -1.98
TNFRSF4P43489 GPM6BP1-201ENST00000446387 144 ntBASIC2.66□□□□□ -1.98
TNFRSF4P43489 WASF1P1-201ENST00000447560 1131 ntBASIC2.66□□□□□ -1.98
TNFRSF4P43489 SNORD97-201ENST00000459187 142 ntBASIC2.66□□□□□ -1.98
TNFRSF4P43489 RPS27P29-201ENST00000463110 252 ntBASIC2.66□□□□□ -1.98
TNFRSF4P43489 RPS26P21-201ENST00000475397 348 ntBASIC2.66□□□□□ -1.98
TNFRSF4P43489 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.66□□□□□ -1.98
TNFRSF4P43489 MTCO3P28-201ENST00000513351 515 ntBASIC2.66□□□□□ -1.98
TNFRSF4P43489 FABP5P5-201ENST00000515537 406 ntBASIC2.66□□□□□ -1.98
TNFRSF4P43489 RNA5SP471-201ENST00000516971 106 ntBASIC2.66□□□□□ -1.98
TNFRSF4P43489 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.66□□□□□ -1.98
TNFRSF4P43489 AC128657.1-201ENST00000549459 145 ntBASIC2.66□□□□□ -1.98
TNFRSF4P43489 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.66□□□□□ -1.98
TNFRSF4P43489 AC025281.1-201ENST00000567026 265 ntBASIC2.66□□□□□ -1.98
TNFRSF4P43489 AC073544.2-201ENST00000601155 540 ntBASIC2.66□□□□□ -1.98
TNFRSF4P43489 AC112191.3-201ENST00000604371 277 ntBASIC2.66□□□□□ -1.98
TNFRSF4P43489 AC025034.2-201ENST00000623264 286 ntBASIC2.66□□□□□ -1.98
TNFRSF4P43489 AC138915.1-201ENST00000565427 1685 ntBASIC2.66□□□□□ -1.98
TNFRSF4P43489 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.66□□□□□ -1.98
TNFRSF4P43489 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
TNFRSF4P43489 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC2.65□□□□□ -1.98
TNFRSF4P43489 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.65□□□□□ -1.99
TNFRSF4P43489 FGF7P2-201ENST00000332473 296 ntBASIC2.65□□□□□ -1.99
TNFRSF4P43489 RFX3-203ENST00000381984 364 ntTSL 3 BASIC2.65□□□□□ -1.99
TNFRSF4P43489 FCF1P10-201ENST00000407590 479 ntBASIC2.65□□□□□ -1.99
TNFRSF4P43489 RNU2-68P-201ENST00000410878 191 ntBASIC2.65□□□□□ -1.99
TNFRSF4P43489 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.65□□□□□ -1.99
TNFRSF4P43489 SLC44A3-AS1-205ENST00000424505 612 ntBASIC2.65□□□□□ -1.99
TNFRSF4P43489 RPL7P37-201ENST00000425095 738 ntBASIC2.65□□□□□ -1.99
TNFRSF4P43489 TRIM60P10Y-201ENST00000425589 751 ntBASIC2.65□□□□□ -1.99
TNFRSF4P43489 AL358075.3-201ENST00000426289 226 ntBASIC2.65□□□□□ -1.99
TNFRSF4P43489 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.65□□□□□ -1.99
TNFRSF4P43489 NEFMP1-201ENST00000443423 1006 ntBASIC2.65□□□□□ -1.99
TNFRSF4P43489 TAF9P1-201ENST00000445421 515 ntBASIC2.65□□□□□ -1.99
TNFRSF4P43489 TAF9P2-201ENST00000454958 515 ntBASIC2.65□□□□□ -1.99
TNFRSF4P43489 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC2.65□□□□□ -1.99
TNFRSF4P43489 AL590639.1-201ENST00000456484 337 ntBASIC2.65□□□□□ -1.99
TNFRSF4P43489 RNU6-956P-201ENST00000458868 103 ntBASIC2.65□□□□□ -1.99
TNFRSF4P43489 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.65□□□□□ -1.99
TNFRSF4P43489 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.65□□□□□ -1.99
TNFRSF4P43489 AC010424.1-201ENST00000506336 297 ntBASIC2.65□□□□□ -1.99
TNFRSF4P43489 SNORA31.3-201ENST00000516029 96 ntBASIC2.65□□□□□ -1.99
TNFRSF4P43489 RNA5SP165-201ENST00000517142 115 ntBASIC2.65□□□□□ -1.99
TNFRSF4P43489 AC107934.1-201ENST00000522215 217 ntBASIC2.65□□□□□ -1.99
TNFRSF4P43489 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.65□□□□□ -1.99
TNFRSF4P43489 AP006587.4-201ENST00000526053 529 ntBASIC2.65□□□□□ -1.99
TNFRSF4P43489 AP002453.2-201ENST00000533503 320 ntBASIC2.65□□□□□ -1.99
TNFRSF4P43489 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC2.65□□□□□ -1.99
TNFRSF4P43489 RPS3AP4-201ENST00000555161 764 ntBASIC2.65□□□□□ -1.99
TNFRSF4P43489 AL359212.1-201ENST00000556608 614 ntBASIC2.65□□□□□ -1.99
TNFRSF4P43489 RSL24D1P11-201ENST00000591045 491 ntBASIC2.65□□□□□ -1.99
TNFRSF4P43489 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC2.65□□□□□ -1.99
TNFRSF4P43489 BNIP3P8-201ENST00000597863 560 ntBASIC2.65□□□□□ -1.99
TNFRSF4P43489 AP000860.1-201ENST00000605250 559 ntBASIC2.65□□□□□ -1.99
TNFRSF4P43489 RN7SKP299-201ENST00000606679 301 ntBASIC2.65□□□□□ -1.99
TNFRSF4P43489 BX664608.1-201ENST00000610519 487 ntBASIC2.65□□□□□ -1.99
TNFRSF4P43489 AC025594.3-201ENST00000613068 790 ntBASIC2.65□□□□□ -1.99
TNFRSF4P43489 AC006338.1-201ENST00000618453 749 ntBASIC2.65□□□□□ -1.99
TNFRSF4P43489 U4.3-201ENST00000621047 82 ntBASIC2.65□□□□□ -1.99
TNFRSF4P43489 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.65□□□□□ -1.99
TNFRSF4P43489 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.65□□□□□ -1.99
TNFRSF4P43489 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 185.4 ms