Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SLC6A4P31645 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
SLC6A4P31645 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SLC6A4P31645 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
SLC6A4P31645 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.8□□□□□ -1.8
SLC6A4P31645 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
SLC6A4P31645 RNU6-1297P-201ENST00000384415 104 ntBASIC3.8□□□□□ -1.8
SLC6A4P31645 RNU1-89P-201ENST00000384592 164 ntBASIC3.8□□□□□ -1.8
SLC6A4P31645 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SLC6A4P31645 MIR548K-201ENST00000408406 116 ntBASIC3.8□□□□□ -1.8
SLC6A4P31645 ATP5A1P2-201ENST00000412323 255 ntBASIC3.8□□□□□ -1.8
SLC6A4P31645 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC3.8□□□□□ -1.8
SLC6A4P31645 VN1R36P-201ENST00000414936 291 ntBASIC3.8□□□□□ -1.8
SLC6A4P31645 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.8□□□□□ -1.8
SLC6A4P31645 AL669831.1-202ENST00000428504 417 ntBASIC3.8□□□□□ -1.8
SLC6A4P31645 AC005534.2-201ENST00000431047 433 ntBASIC3.8□□□□□ -1.8
SLC6A4P31645 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.8□□□□□ -1.8
SLC6A4P31645 RPL7P28-201ENST00000437739 740 ntBASIC3.8□□□□□ -1.8
SLC6A4P31645 HMGB3P11-201ENST00000440127 604 ntBASIC3.8□□□□□ -1.8
SLC6A4P31645 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.8□□□□□ -1.8
SLC6A4P31645 TXNP1-201ENST00000441872 371 ntBASIC3.8□□□□□ -1.8
SLC6A4P31645 RPS20P22-201ENST00000473700 357 ntBASIC3.8□□□□□ -1.8
SLC6A4P31645 AC012181.1-201ENST00000479895 423 ntBASIC3.8□□□□□ -1.8
SLC6A4P31645 AL049874.1-201ENST00000489560 388 ntBASIC3.8□□□□□ -1.8
SLC6A4P31645 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SLC6A4P31645 SNORA14.1-201ENST00000516113 141 ntBASIC3.8□□□□□ -1.8
SLC6A4P31645 RNU6-143P-201ENST00000516942 93 ntBASIC3.8□□□□□ -1.8
SLC6A4P31645 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.8□□□□□ -1.8
SLC6A4P31645 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.8□□□□□ -1.8
SLC6A4P31645 HPRT1P3-201ENST00000539521 576 ntBASIC3.8□□□□□ -1.8
SLC6A4P31645 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.8□□□□□ -1.8
SLC6A4P31645 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.8□□□□□ -1.8
SLC6A4P31645 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.8□□□□□ -1.8
SLC6A4P31645 MED28P6-201ENST00000558776 231 ntBASIC3.8□□□□□ -1.8
SLC6A4P31645 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.8□□□□□ -1.8
SLC6A4P31645 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC3.8□□□□□ -1.8
SLC6A4P31645 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.8□□□□□ -1.8
SLC6A4P31645 AC023043.2-201ENST00000589678 1026 ntBASIC3.8□□□□□ -1.8
SLC6A4P31645 AC007179.3-201ENST00000604976 235 ntBASIC3.8□□□□□ -1.8
SLC6A4P31645 AL160281.1-201ENST00000605307 311 ntBASIC3.8□□□□□ -1.8
SLC6A4P31645 MIR15A-201ENST00000607334 83 ntBASIC3.8□□□□□ -1.8
SLC6A4P31645 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.8□□□□□ -1.8
SLC6A4P31645 AL391261.4-201ENST00000616012 481 ntBASIC3.8□□□□□ -1.8
SLC6A4P31645 AC126177.8-201ENST00000618339 1015 ntBASIC3.8□□□□□ -1.8
SLC6A4P31645 AC012314.7-201ENST00000619693 93 ntBASIC3.8□□□□□ -1.8
SLC6A4P31645 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC3.8□□□□□ -1.8
SLC6A4P31645 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
SLC6A4P31645 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
SLC6A4P31645 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
SLC6A4P31645 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.8□□□□□ -1.8
SLC6A4P31645 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.8□□□□□ -1.8
SLC6A4P31645 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.8□□□□□ -1.8
SLC6A4P31645 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SLC6A4P31645 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.79□□□□□ -1.8
SLC6A4P31645 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
SLC6A4P31645 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.79□□□□□ -1.8
SLC6A4P31645 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SLC6A4P31645 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SLC6A4P31645 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.79□□□□□ -1.8
SLC6A4P31645 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SLC6A4P31645 RNA5SP322-201ENST00000363617 119 ntBASIC3.79□□□□□ -1.8
SLC6A4P31645 Y_RNA.339-201ENST00000365325 102 ntBASIC3.79□□□□□ -1.8
SLC6A4P31645 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SLC6A4P31645 RNU6-128P-201ENST00000383976 107 ntBASIC3.79□□□□□ -1.8
SLC6A4P31645 Y_RNA.480-201ENST00000384364 102 ntBASIC3.79□□□□□ -1.8
SLC6A4P31645 AL360182.1-201ENST00000397433 468 ntBASIC3.79□□□□□ -1.8
SLC6A4P31645 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
SLC6A4P31645 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.79□□□□□ -1.8
SLC6A4P31645 TOMM22P1-201ENST00000418578 312 ntBASIC3.79□□□□□ -1.8
SLC6A4P31645 BX842559.1-201ENST00000419615 532 ntBASIC3.79□□□□□ -1.8
SLC6A4P31645 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.79□□□□□ -1.8
SLC6A4P31645 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.79□□□□□ -1.8
SLC6A4P31645 SNAP23P1-201ENST00000433229 246 ntBASIC3.79□□□□□ -1.8
SLC6A4P31645 NDUFB1P1-201ENST00000435191 180 ntBASIC3.79□□□□□ -1.8
SLC6A4P31645 RPS3AP46-201ENST00000448352 682 ntBASIC3.79□□□□□ -1.8
SLC6A4P31645 SNORD19B-201ENST00000459623 84 ntBASIC3.79□□□□□ -1.8
SLC6A4P31645 APOOP4-201ENST00000513530 597 ntBASIC3.79□□□□□ -1.8
SLC6A4P31645 SNORA31.8-201ENST00000516327 108 ntBASIC3.79□□□□□ -1.8
SLC6A4P31645 Y_RNA.682-201ENST00000516457 100 ntBASIC3.79□□□□□ -1.8
SLC6A4P31645 MIR2114-201ENST00000516645 80 ntBASIC3.79□□□□□ -1.8
SLC6A4P31645 SCARNA13-201ENST00000516672 275 ntBASIC3.79□□□□□ -1.8
SLC6A4P31645 RNU6-914P-201ENST00000516749 109 ntBASIC3.79□□□□□ -1.8
SLC6A4P31645 RNU6-566P-201ENST00000516790 107 ntBASIC3.79□□□□□ -1.8
SLC6A4P31645 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.79□□□□□ -1.8
SLC6A4P31645 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC3.79□□□□□ -1.8
SLC6A4P31645 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC3.79□□□□□ -1.8
SLC6A4P31645 AC007151.1-201ENST00000572774 483 ntBASIC3.79□□□□□ -1.8
SLC6A4P31645 MIR3922-201ENST00000585192 84 ntBASIC3.79□□□□□ -1.8
SLC6A4P31645 AP001330.4-201ENST00000604350 154 ntBASIC3.79□□□□□ -1.8
SLC6A4P31645 BRDTP1-201ENST00000605735 677 ntBASIC3.79□□□□□ -1.8
SLC6A4P31645 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.79□□□□□ -1.8
SLC6A4P31645 AC091953.5-201ENST00000622919 233 ntBASIC3.79□□□□□ -1.8
SLC6A4P31645 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.79□□□□□ -1.8
SLC6A4P31645 AP000553.6-201ENST00000641242 118 ntBASIC3.79□□□□□ -1.8
SLC6A4P31645 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
SLC6A4P31645 HSPA8P4-201ENST00000511877 1920 ntBASIC3.79□□□□□ -1.8
SLC6A4P31645 AC007823.1-201ENST00000569932 1566 ntBASIC3.79□□□□□ -1.8
SLC6A4P31645 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
SLC6A4P31645 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
SLC6A4P31645 ZNF736P3Y-201ENST00000428264 1465 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms