Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 AC005034.5-201ENST00000604219 466 ntBASIC4.22□□□□□ -1.73
VAMP1P23763 RNU6-91P-201ENST00000607774 107 ntBASIC4.22□□□□□ -1.73
VAMP1P23763 MIR1244-1-201ENST00000612829 85 ntBASIC4.22□□□□□ -1.73
VAMP1P23763 AL138825.1-201ENST00000618587 192 ntBASIC4.22□□□□□ -1.73
VAMP1P23763 UCA1.1-201ENST00000620952 75 ntBASIC4.22□□□□□ -1.73
VAMP1P23763 AC132068.1-201ENST00000623805 459 ntBASIC4.22□□□□□ -1.73
VAMP1P23763 AP001052.1-201ENST00000626421 99 ntBASIC4.22□□□□□ -1.73
VAMP1P23763 MIR1244-3-201ENST00000635744 85 ntBASIC4.22□□□□□ -1.73
VAMP1P23763 MIR1244-2-201ENST00000636449 85 ntBASIC4.22□□□□□ -1.73
VAMP1P23763 MIR1244-4-202ENST00000636813 85 ntBASIC4.22□□□□□ -1.73
VAMP1P23763 AC119674.1-207ENST00000641355 633 ntBASIC4.22□□□□□ -1.73
VAMP1P23763 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
VAMP1P23763 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
VAMP1P23763 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.73
VAMP1P23763 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
VAMP1P23763 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
VAMP1P23763 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
VAMP1P23763 RNA5SP90-201ENST00000364801 99 ntBASIC4.21□□□□□ -1.74
VAMP1P23763 RNU4-9P-201ENST00000364951 139 ntBASIC4.21□□□□□ -1.74
VAMP1P23763 MIR628-201ENST00000385229 95 ntBASIC4.21□□□□□ -1.74
VAMP1P23763 U3.25-201ENST00000391209 220 ntBASIC4.21□□□□□ -1.74
VAMP1P23763 AL592291.1-201ENST00000403830 352 ntBASIC4.21□□□□□ -1.74
VAMP1P23763 MTCYBP2-201ENST00000407745 171 ntBASIC4.21□□□□□ -1.74
VAMP1P23763 RNU4-6P-201ENST00000410804 122 ntBASIC4.21□□□□□ -1.74
VAMP1P23763 MTND2P23-201ENST00000422990 651 ntBASIC4.21□□□□□ -1.74
VAMP1P23763 AC017083.1-201ENST00000428093 483 ntBASIC4.21□□□□□ -1.74
VAMP1P23763 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC4.21□□□□□ -1.74
VAMP1P23763 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC4.21□□□□□ -1.74
VAMP1P23763 AL031659.1-201ENST00000447075 539 ntBASIC4.21□□□□□ -1.74
VAMP1P23763 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC4.21□□□□□ -1.74
VAMP1P23763 GSTA11P-201ENST00000452866 669 ntBASIC4.21□□□□□ -1.74
VAMP1P23763 RN7SL568P-201ENST00000493069 298 ntBASIC4.21□□□□□ -1.74
VAMP1P23763 RN7SL649P-201ENST00000496974 275 ntBASIC4.21□□□□□ -1.74
VAMP1P23763 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.21□□□□□ -1.74
VAMP1P23763 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC4.21□□□□□ -1.74
VAMP1P23763 RNU6-1045P-201ENST00000516321 107 ntBASIC4.21□□□□□ -1.74
VAMP1P23763 AC115990.1-201ENST00000526957 301 ntBASIC4.21□□□□□ -1.74
VAMP1P23763 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC4.21□□□□□ -1.74
VAMP1P23763 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC4.21□□□□□ -1.74
VAMP1P23763 MIR3154-201ENST00000577829 84 ntBASIC4.21□□□□□ -1.74
VAMP1P23763 AL391813.1-201ENST00000603098 260 ntBASIC4.21□□□□□ -1.74
VAMP1P23763 AL590392.1-201ENST00000604960 446 ntBASIC4.21□□□□□ -1.74
VAMP1P23763 AC024940.4-201ENST00000605507 246 ntBASIC4.21□□□□□ -1.74
VAMP1P23763 AL355802.3-201ENST00000607571 545 ntBASIC4.21□□□□□ -1.74
VAMP1P23763 AL359198.2-201ENST00000611836 194 ntBASIC4.21□□□□□ -1.74
VAMP1P23763 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC4.21□□□□□ -1.74
VAMP1P23763 5S_rRNA.28-201ENST00000638107 119 ntBASIC4.21□□□□□ -1.74
VAMP1P23763 MTND4P1-201ENST00000457501 1466 ntBASIC4.21□□□□□ -1.74
VAMP1P23763 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
VAMP1P23763 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
VAMP1P23763 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.21□□□□□ -1.74
VAMP1P23763 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
VAMP1P23763 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.21□□□□□ -1.74
VAMP1P23763 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.2□□□□□ -1.74
VAMP1P23763 RN7SKP115-201ENST00000363177 317 ntBASIC4.2□□□□□ -1.74
VAMP1P23763 Y_RNA.148-201ENST00000363557 117 ntBASIC4.2□□□□□ -1.74
VAMP1P23763 RNU1-32P-201ENST00000363937 159 ntBASIC4.2□□□□□ -1.74
VAMP1P23763 RNU1-115P-201ENST00000365329 160 ntBASIC4.2□□□□□ -1.74
VAMP1P23763 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC4.2□□□□□ -1.74
VAMP1P23763 SNORA2.3-201ENST00000383920 135 ntBASIC4.2□□□□□ -1.74
VAMP1P23763 RNY1P14-201ENST00000384426 108 ntBASIC4.2□□□□□ -1.74
VAMP1P23763 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC4.2□□□□□ -1.74
VAMP1P23763 Z82198.3-201ENST00000421145 199 ntBASIC4.2□□□□□ -1.74
VAMP1P23763 MRPS18CP6-201ENST00000423587 223 ntBASIC4.2□□□□□ -1.74
VAMP1P23763 RPL7P2-201ENST00000427639 268 ntBASIC4.2□□□□□ -1.74
VAMP1P23763 FGF12-202ENST00000430714 603 ntTSL 2 BASIC4.2□□□□□ -1.74
VAMP1P23763 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC4.2□□□□□ -1.74
VAMP1P23763 AC244670.1-201ENST00000436879 112 ntBASIC4.2□□□□□ -1.74
VAMP1P23763 OSTCP8-201ENST00000445117 448 ntBASIC4.2□□□□□ -1.74
VAMP1P23763 EEF1B2P6-201ENST00000445713 673 ntBASIC4.2□□□□□ -1.74
VAMP1P23763 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
VAMP1P23763 AC079354.2-201ENST00000453523 154 ntBASIC4.2□□□□□ -1.74
VAMP1P23763 RNU7-87P-201ENST00000459343 62 ntBASIC4.2□□□□□ -1.74
VAMP1P23763 RNU7-169P-201ENST00000459456 61 ntBASIC4.2□□□□□ -1.74
VAMP1P23763 CBX1-205ENST00000495350 550 ntTSL 2 BASIC4.2□□□□□ -1.74
VAMP1P23763 RNU6ATAC13P-201ENST00000516152 131 ntBASIC4.2□□□□□ -1.74
VAMP1P23763 AC012400.1-201ENST00000518452 381 ntBASIC4.2□□□□□ -1.74
VAMP1P23763 NRBF2P4-201ENST00000520874 850 ntBASIC4.2□□□□□ -1.74
VAMP1P23763 HMGB1P40-201ENST00000525121 540 ntBASIC4.2□□□□□ -1.74
VAMP1P23763 AP000889.1-201ENST00000530968 660 ntBASIC4.2□□□□□ -1.74
VAMP1P23763 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC4.2□□□□□ -1.74
VAMP1P23763 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
VAMP1P23763 AL049872.1-201ENST00000556323 322 ntBASIC4.2□□□□□ -1.74
VAMP1P23763 RPS15AP11-201ENST00000594193 385 ntBASIC4.2□□□□□ -1.74
VAMP1P23763 B3GNTL1P2-201ENST00000603673 288 ntBASIC4.2□□□□□ -1.74
VAMP1P23763 AC100812.1-201ENST00000607622 580 ntBASIC4.2□□□□□ -1.74
VAMP1P23763 AC107294.3-201ENST00000609211 526 ntBASIC4.2□□□□□ -1.74
VAMP1P23763 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC4.2□□□□□ -1.74
VAMP1P23763 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC4.2□□□□□ -1.74
VAMP1P23763 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
VAMP1P23763 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
VAMP1P23763 AC027290.2-201ENST00000623210 18662 ntBASIC4.2□□□□□ -1.74
VAMP1P23763 AL049781.1-201ENST00000623195 3585 ntBASIC4.19□□□□□ -1.74
VAMP1P23763 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.19□□□□□ -1.74
VAMP1P23763 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
VAMP1P23763 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
VAMP1P23763 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
VAMP1P23763 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.19□□□□□ -1.74
VAMP1P23763 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
VAMP1P23763 OR5P1P-201ENST00000299512 925 ntBASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms