Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC2.32□□□□□ -2.04
RETP07949 AC026407.1-201ENST00000518369 204 ntBASIC2.32□□□□□ -2.04
RETP07949 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC2.32□□□□□ -2.04
RETP07949 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC2.32□□□□□ -2.04
RETP07949 ZNF321P-202ENST00000550843 495 ntBASIC2.32□□□□□ -2.04
RETP07949 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC2.32□□□□□ -2.04
RETP07949 AC068135.2-201ENST00000569293 1028 ntBASIC2.32□□□□□ -2.04
RETP07949 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC2.32□□□□□ -2.04
RETP07949 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC2.32□□□□□ -2.04
RETP07949 AL391813.2-201ENST00000609113 322 ntBASIC2.32□□□□□ -2.04
RETP07949 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.32□□□□□ -2.04
RETP07949 AL449363.1-201ENST00000617815 186 ntBASIC2.32□□□□□ -2.04
RETP07949 AL607023.1-201ENST00000620045 248 ntBASIC2.32□□□□□ -2.04
RETP07949 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC2.32□□□□□ -2.04
RETP07949 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.32□□□□□ -2.04
RETP07949 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.32□□□□□ -2.04
RETP07949 AC005832.2-201ENST00000538921 1430 ntBASIC2.32□□□□□ -2.04
RETP07949 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC2.32□□□□□ -2.04
RETP07949 SDAD1P2-201ENST00000441308 2028 ntBASIC2.32□□□□□ -2.04
RETP07949 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC2.31□□□□□ -2.04
RETP07949 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
RETP07949 RNU6-1200P-201ENST00000384162 107 ntBASIC2.31□□□□□ -2.04
RETP07949 SNORA64-201ENST00000384674 134 ntBASIC2.31□□□□□ -2.04
RETP07949 RN7SKP32-201ENST00000410167 303 ntBASIC2.31□□□□□ -2.04
RETP07949 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC2.31□□□□□ -2.04
RETP07949 USP9YP27-201ENST00000418455 438 ntBASIC2.31□□□□□ -2.04
RETP07949 AC098592.1-201ENST00000419352 333 ntBASIC2.31□□□□□ -2.04
RETP07949 AL022400.1-201ENST00000423946 935 ntBASIC2.31□□□□□ -2.04
RETP07949 MTCO3P30-201ENST00000426425 670 ntBASIC2.31□□□□□ -2.04
RETP07949 AL714022.1-201ENST00000439897 151 ntBASIC2.31□□□□□ -2.04
RETP07949 AL606662.1-201ENST00000445763 553 ntBASIC2.31□□□□□ -2.04
RETP07949 COX6CP12-201ENST00000446748 202 ntBASIC2.31□□□□□ -2.04
RETP07949 RNU6-420P-201ENST00000458780 107 ntBASIC2.31□□□□□ -2.04
RETP07949 AC116337.2-201ENST00000477662 156 ntBASIC2.31□□□□□ -2.04
RETP07949 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.31□□□□□ -2.04
RETP07949 AC104685.1-201ENST00000502445 371 ntBASIC2.31□□□□□ -2.04
RETP07949 NDUFB4P2-201ENST00000509515 391 ntBASIC2.31□□□□□ -2.04
RETP07949 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.31□□□□□ -2.04
RETP07949 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC2.31□□□□□ -2.04
RETP07949 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.31□□□□□ -2.04
RETP07949 RNA5SP216-201ENST00000516111 123 ntBASIC2.31□□□□□ -2.04
RETP07949 RNU6-295P-201ENST00000516901 104 ntBASIC2.31□□□□□ -2.04
RETP07949 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC2.31□□□□□ -2.04
RETP07949 ELOCP32-201ENST00000548625 324 ntBASIC2.31□□□□□ -2.04
RETP07949 AC090888.2-201ENST00000559765 1144 ntBASIC2.31□□□□□ -2.04
RETP07949 AC090888.1-201ENST00000561335 1141 ntBASIC2.31□□□□□ -2.04
RETP07949 AC025281.1-201ENST00000567026 265 ntBASIC2.31□□□□□ -2.04
RETP07949 AC002400.1-201ENST00000569310 726 ntBASIC2.31□□□□□ -2.04
RETP07949 MIR4498-201ENST00000577599 66 ntBASIC2.31□□□□□ -2.04
RETP07949 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.31□□□□□ -2.04
RETP07949 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.31□□□□□ -2.04
RETP07949 RNU6-88P-201ENST00000606801 100 ntBASIC2.31□□□□□ -2.04
RETP07949 AC008147.4-201ENST00000617570 1204 ntBASIC2.31□□□□□ -2.04
RETP07949 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.31□□□□□ -2.04
RETP07949 MIR219B-201ENST00000637023 88 ntBASIC2.31□□□□□ -2.04
RETP07949 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC2.31□□□□□ -2.04
RETP07949 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
RETP07949 AL391994.1-201ENST00000254724 282 ntBASIC2.3□□□□□ -2.04
RETP07949 RNU6-462P-201ENST00000362659 105 ntBASIC2.3□□□□□ -2.04
RETP07949 MIR767-201ENST00000390228 109 ntBASIC2.3□□□□□ -2.04
RETP07949 AL355497.1-201ENST00000406262 551 ntBASIC2.3□□□□□ -2.04
RETP07949 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.3□□□□□ -2.04
RETP07949 Y_RNA.595-201ENST00000410403 105 ntBASIC2.3□□□□□ -2.04
RETP07949 AC083875.1-201ENST00000419509 405 ntBASIC2.3□□□□□ -2.04
RETP07949 AC099548.1-201ENST00000421443 426 ntBASIC2.3□□□□□ -2.04
RETP07949 AC092447.3-201ENST00000426027 686 ntBASIC2.3□□□□□ -2.04
RETP07949 AL358075.3-201ENST00000426289 226 ntBASIC2.3□□□□□ -2.04
RETP07949 AC009414.1-201ENST00000427200 443 ntBASIC2.3□□□□□ -2.04
RETP07949 AC008850.1-201ENST00000427546 362 ntBASIC2.3□□□□□ -2.04
RETP07949 MTCYBP3-201ENST00000445588 1137 ntBASIC2.3□□□□□ -2.04
RETP07949 AC007677.1-201ENST00000445757 515 ntBASIC2.3□□□□□ -2.04
RETP07949 AC098826.2-201ENST00000452011 651 ntBASIC2.3□□□□□ -2.04
RETP07949 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.3□□□□□ -2.04
RETP07949 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC2.3□□□□□ -2.04
RETP07949 AC104563.1-201ENST00000476147 376 ntBASIC2.3□□□□□ -2.04
RETP07949 AC021382.1-201ENST00000483523 359 ntBASIC2.3□□□□□ -2.04
RETP07949 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.3□□□□□ -2.04
RETP07949 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.3□□□□□ -2.04
RETP07949 MTND4P2-201ENST00000507767 1203 ntBASIC2.3□□□□□ -2.04
RETP07949 MTCYBP43-201ENST00000513621 740 ntBASIC2.3□□□□□ -2.04
RETP07949 SCARNA15.2-201ENST00000516409 127 ntBASIC2.3□□□□□ -2.04
RETP07949 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.3□□□□□ -2.04
RETP07949 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC2.3□□□□□ -2.04
RETP07949 DUXAP5-201ENST00000529668 529 ntBASIC2.3□□□□□ -2.04
RETP07949 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC2.3□□□□□ -2.04
RETP07949 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC2.3□□□□□ -2.04
RETP07949 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
RETP07949 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
RETP07949 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC2.3□□□□□ -2.04
RETP07949 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.3□□□□□ -2.04
RETP07949 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC2.3□□□□□ -2.04
RETP07949 MIR5007-201ENST00000583098 95 ntBASIC2.3□□□□□ -2.04
RETP07949 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC2.3□□□□□ -2.04
RETP07949 NIFKP6-201ENST00000598115 845 ntBASIC2.3□□□□□ -2.04
RETP07949 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.3□□□□□ -2.04
RETP07949 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC2.3□□□□□ -2.04
RETP07949 AC067747.1-201ENST00000608026 250 ntBASIC2.3□□□□□ -2.04
RETP07949 AC009318.2-201ENST00000610917 651 ntBASIC2.3□□□□□ -2.04
RETP07949 HMGB1P24-202ENST00000615653 685 ntBASIC2.3□□□□□ -2.04
RETP07949 AC079416.3-201ENST00000624479 549 ntBASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 145.8 ms