Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 AC124303.1-201ENST00000605703 360 ntBASIC3.98□□□□□ -1.77
HLA-DOAP06340 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC3.98□□□□□ -1.77
HLA-DOAP06340 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.98□□□□□ -1.77
HLA-DOAP06340 AC006065.5-201ENST00000623427 349 ntBASIC3.98□□□□□ -1.77
HLA-DOAP06340 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
HLA-DOAP06340 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
HLA-DOAP06340 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.98□□□□□ -1.77
HLA-DOAP06340 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.98□□□□□ -1.77
HLA-DOAP06340 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
HLA-DOAP06340 MTND4P27-201ENST00000450813 1354 ntBASIC3.98□□□□□ -1.77
HLA-DOAP06340 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
HLA-DOAP06340 API5P2-201ENST00000397055 1498 ntBASIC3.98□□□□□ -1.77
HLA-DOAP06340 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
HLA-DOAP06340 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.97□□□□□ -1.77
HLA-DOAP06340 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
HLA-DOAP06340 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
HLA-DOAP06340 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.97□□□□□ -1.77
HLA-DOAP06340 Y_RNA.31-201ENST00000362574 102 ntBASIC3.97□□□□□ -1.77
HLA-DOAP06340 RNU6-738P-201ENST00000384531 106 ntBASIC3.97□□□□□ -1.77
HLA-DOAP06340 MIR559-201ENST00000385188 96 ntBASIC3.97□□□□□ -1.77
HLA-DOAP06340 RNU6-308P-201ENST00000390957 107 ntBASIC3.97□□□□□ -1.77
HLA-DOAP06340 AL109755.1-201ENST00000401791 649 ntBASIC3.97□□□□□ -1.77
HLA-DOAP06340 VN1R36P-201ENST00000414936 291 ntBASIC3.97□□□□□ -1.77
HLA-DOAP06340 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3.97□□□□□ -1.77
HLA-DOAP06340 AC245054.2-201ENST00000415639 319 ntBASIC3.97□□□□□ -1.77
HLA-DOAP06340 RPL7P46-201ENST00000425129 740 ntBASIC3.97□□□□□ -1.77
HLA-DOAP06340 RPL35AP22-201ENST00000436855 335 ntBASIC3.97□□□□□ -1.77
HLA-DOAP06340 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.97□□□□□ -1.77
HLA-DOAP06340 AC004801.2-202ENST00000463559 283 ntBASIC3.97□□□□□ -1.77
HLA-DOAP06340 AC012181.1-201ENST00000479895 423 ntBASIC3.97□□□□□ -1.77
HLA-DOAP06340 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.97□□□□□ -1.77
HLA-DOAP06340 AC091885.1-201ENST00000506658 268 ntBASIC3.97□□□□□ -1.77
HLA-DOAP06340 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.97□□□□□ -1.77
HLA-DOAP06340 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC3.97□□□□□ -1.77
HLA-DOAP06340 RNU6-1092P-201ENST00000516955 87 ntBASIC3.97□□□□□ -1.77
HLA-DOAP06340 RNU4-60P-201ENST00000517239 135 ntBASIC3.97□□□□□ -1.77
HLA-DOAP06340 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC3.97□□□□□ -1.77
HLA-DOAP06340 AC103783.1-201ENST00000520506 373 ntBASIC3.97□□□□□ -1.77
HLA-DOAP06340 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.97□□□□□ -1.77
HLA-DOAP06340 APOOP3-201ENST00000536787 586 ntBASIC3.97□□□□□ -1.77
HLA-DOAP06340 AP000763.2-201ENST00000540641 163 ntBASIC3.97□□□□□ -1.77
HLA-DOAP06340 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC3.97□□□□□ -1.77
HLA-DOAP06340 RPL23AP84-201ENST00000571193 464 ntBASIC3.97□□□□□ -1.77
HLA-DOAP06340 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.97□□□□□ -1.77
HLA-DOAP06340 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3.97□□□□□ -1.77
HLA-DOAP06340 AC006254.3-201ENST00000603353 884 ntBASIC3.97□□□□□ -1.77
HLA-DOAP06340 SNRPGP17-201ENST00000603780 214 ntBASIC3.97□□□□□ -1.77
HLA-DOAP06340 DPPA3P3-201ENST00000603842 430 ntBASIC3.97□□□□□ -1.77
HLA-DOAP06340 AP001330.4-201ENST00000604350 154 ntBASIC3.97□□□□□ -1.77
HLA-DOAP06340 AL034351.1-201ENST00000605288 668 ntBASIC3.97□□□□□ -1.77
HLA-DOAP06340 AC080078.3-201ENST00000605407 463 ntBASIC3.97□□□□□ -1.77
HLA-DOAP06340 AC073657.2-201ENST00000605661 303 ntBASIC3.97□□□□□ -1.77
HLA-DOAP06340 AL450472.3-201ENST00000615578 367 ntBASIC3.97□□□□□ -1.77
HLA-DOAP06340 LINC00901.1-201ENST00000617252 152 ntBASIC3.97□□□□□ -1.77
HLA-DOAP06340 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.97□□□□□ -1.77
HLA-DOAP06340 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
HLA-DOAP06340 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
HLA-DOAP06340 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
HLA-DOAP06340 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
HLA-DOAP06340 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.77
HLA-DOAP06340 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
HLA-DOAP06340 AP001350.1-201ENST00000601906 1524 ntBASIC3.96□□□□□ -1.78
HLA-DOAP06340 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
HLA-DOAP06340 AC090229.1-201ENST00000590983 1609 ntBASIC3.96□□□□□ -1.78
HLA-DOAP06340 AL513302.2-201ENST00000562313 1842 ntBASIC3.96□□□□□ -1.78
HLA-DOAP06340 RNU6-1287P-201ENST00000362914 107 ntBASIC3.96□□□□□ -1.78
HLA-DOAP06340 RNU6-1155P-201ENST00000363554 107 ntBASIC3.96□□□□□ -1.78
HLA-DOAP06340 RNA5SP322-201ENST00000363617 119 ntBASIC3.96□□□□□ -1.78
HLA-DOAP06340 SMIM11P1-201ENST00000369586 178 ntBASIC3.96□□□□□ -1.78
HLA-DOAP06340 RNU6-1297P-201ENST00000384415 104 ntBASIC3.96□□□□□ -1.78
HLA-DOAP06340 Y_RNA.530-201ENST00000384587 101 ntBASIC3.96□□□□□ -1.78
HLA-DOAP06340 RNU6-1060P-201ENST00000384664 107 ntBASIC3.96□□□□□ -1.78
HLA-DOAP06340 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
HLA-DOAP06340 RPL5P18-201ENST00000406671 891 ntBASIC3.96□□□□□ -1.78
HLA-DOAP06340 MIR548K-201ENST00000408406 116 ntBASIC3.96□□□□□ -1.78
HLA-DOAP06340 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.96□□□□□ -1.78
HLA-DOAP06340 RPL30P2-201ENST00000414021 291 ntBASIC3.96□□□□□ -1.78
HLA-DOAP06340 AC099677.1-201ENST00000420575 175 ntBASIC3.96□□□□□ -1.78
HLA-DOAP06340 Z82205.1-201ENST00000428456 297 ntBASIC3.96□□□□□ -1.78
HLA-DOAP06340 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC3.96□□□□□ -1.78
HLA-DOAP06340 GTF2IP13-201ENST00000438487 386 ntBASIC3.96□□□□□ -1.78
HLA-DOAP06340 AC008264.1-201ENST00000447612 367 ntBASIC3.96□□□□□ -1.78
HLA-DOAP06340 AC115115.1-201ENST00000449927 248 ntBASIC3.96□□□□□ -1.78
HLA-DOAP06340 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.96□□□□□ -1.78
HLA-DOAP06340 AC010631.1-201ENST00000474150 156 ntBASIC3.96□□□□□ -1.78
HLA-DOAP06340 RPL23AP11-201ENST00000475260 469 ntBASIC3.96□□□□□ -1.78
HLA-DOAP06340 RPL7P23-201ENST00000493874 747 ntBASIC3.96□□□□□ -1.78
HLA-DOAP06340 AC023141.12-201ENST00000512399 199 ntBASIC3.96□□□□□ -1.78
HLA-DOAP06340 PHBP14-201ENST00000512887 367 ntBASIC3.96□□□□□ -1.78
HLA-DOAP06340 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC3.96□□□□□ -1.78
HLA-DOAP06340 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.96□□□□□ -1.78
HLA-DOAP06340 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
HLA-DOAP06340 MIR3672-201ENST00000584290 82 ntBASIC3.96□□□□□ -1.78
HLA-DOAP06340 TUG1_2.1-201ENST00000614234 87 ntBASIC3.96□□□□□ -1.78
HLA-DOAP06340 AL589994.2-201ENST00000621124 579 ntBASIC3.96□□□□□ -1.78
HLA-DOAP06340 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.96□□□□□ -1.78
HLA-DOAP06340 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
HLA-DOAP06340 STK31-205ENST00000433467 3085 ntTSL 2 BASIC3.96□□□□□ -1.78
HLA-DOAP06340 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
HLA-DOAP06340 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms