Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 RNU6-927P-201ENST00000516199 100 ntBASIC2.59□□□□□ -1.99
CHRNA1P02708 Y_RNA.717-201ENST00000517106 92 ntBASIC2.59□□□□□ -1.99
CHRNA1P02708 HMGB1P41-201ENST00000520234 440 ntBASIC2.59□□□□□ -1.99
CHRNA1P02708 AC022634.1-201ENST00000520765 532 ntBASIC2.59□□□□□ -1.99
CHRNA1P02708 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.59□□□□□ -1.99
CHRNA1P02708 NAP1L1P1-201ENST00000524793 1063 ntBASIC2.59□□□□□ -1.99
CHRNA1P02708 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.59□□□□□ -1.99
CHRNA1P02708 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
CHRNA1P02708 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC2.59□□□□□ -1.99
CHRNA1P02708 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.59□□□□□ -1.99
CHRNA1P02708 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.59□□□□□ -1.99
CHRNA1P02708 AL158827.2-201ENST00000602494 330 ntBASIC2.59□□□□□ -1.99
CHRNA1P02708 AC098826.3-201ENST00000603823 466 ntBASIC2.59□□□□□ -1.99
CHRNA1P02708 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.59□□□□□ -1.99
CHRNA1P02708 AC092192.1-201ENST00000633154 1018 ntBASIC2.59□□□□□ -1.99
CHRNA1P02708 AL691447.3-201ENST00000635020 330 ntBASIC2.59□□□□□ -1.99
CHRNA1P02708 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.58□□□□□ -2
CHRNA1P02708 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.58□□□□□ -2
CHRNA1P02708 OR56A5-201ENST00000340110 738 ntBASIC2.58□□□□□ -2
CHRNA1P02708 RNU6-769P-201ENST00000384407 104 ntBASIC2.58□□□□□ -2
CHRNA1P02708 VPS26BP1-201ENST00000417155 755 ntBASIC2.58□□□□□ -2
CHRNA1P02708 DNAJA1P2-201ENST00000421360 1197 ntBASIC2.58□□□□□ -2
CHRNA1P02708 AC098614.2-201ENST00000426040 255 ntBASIC2.58□□□□□ -2
CHRNA1P02708 AC244035.1-201ENST00000430042 390 ntBASIC2.58□□□□□ -2
CHRNA1P02708 MTND5P25-201ENST00000430499 799 ntBASIC2.58□□□□□ -2
CHRNA1P02708 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC2.58□□□□□ -2
CHRNA1P02708 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC2.58□□□□□ -2
CHRNA1P02708 HMGB3P12-201ENST00000438745 556 ntBASIC2.58□□□□□ -2
CHRNA1P02708 RPL12P25-201ENST00000455592 494 ntBASIC2.58□□□□□ -2
CHRNA1P02708 AC027673.1-201ENST00000456245 405 ntBASIC2.58□□□□□ -2
CHRNA1P02708 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC2.58□□□□□ -2
CHRNA1P02708 MRPS17P3-201ENST00000465453 385 ntBASIC2.58□□□□□ -2
CHRNA1P02708 SUMO2P6-201ENST00000505273 288 ntBASIC2.58□□□□□ -2
CHRNA1P02708 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC2.58□□□□□ -2
CHRNA1P02708 AC092436.1-201ENST00000506450 503 ntBASIC2.58□□□□□ -2
CHRNA1P02708 AC116347.2-201ENST00000514912 523 ntBASIC2.58□□□□□ -2
CHRNA1P02708 COX6CP5-201ENST00000527162 228 ntBASIC2.58□□□□□ -2
CHRNA1P02708 VBP1-203ENST00000535916 944 ntTSL 2 BASIC2.58□□□□□ -2
CHRNA1P02708 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.58□□□□□ -2
CHRNA1P02708 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC2.58□□□□□ -2
CHRNA1P02708 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC2.58□□□□□ -2
CHRNA1P02708 ABBA01006766.1-201ENST00000584728 294 ntBASIC2.58□□□□□ -2
CHRNA1P02708 HMGN2P15-201ENST00000585707 270 ntBASIC2.58□□□□□ -2
CHRNA1P02708 AC112187.2-201ENST00000604345 283 ntBASIC2.58□□□□□ -2
CHRNA1P02708 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC2.58□□□□□ -2
CHRNA1P02708 AC009159.1-201ENST00000618386 642 ntBASIC2.58□□□□□ -2
CHRNA1P02708 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.58□□□□□ -2
CHRNA1P02708 AC091304.6-201ENST00000619761 202 ntBASIC2.58□□□□□ -2
CHRNA1P02708 AL356266.1-201ENST00000623311 483 ntBASIC2.58□□□□□ -2
CHRNA1P02708 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.58□□□□□ -2
CHRNA1P02708 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
CHRNA1P02708 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC2.57□□□□□ -2
CHRNA1P02708 CR848007.1-201ENST00000442354 1699 ntBASIC2.57□□□□□ -2
CHRNA1P02708 MTND5P29-201ENST00000458676 1807 ntBASIC2.57□□□□□ -2
CHRNA1P02708 RNU6-884P-201ENST00000363889 107 ntBASIC2.57□□□□□ -2
CHRNA1P02708 RNU5A-8P-201ENST00000364102 114 ntBASIC2.57□□□□□ -2
CHRNA1P02708 DEFA7P-201ENST00000382676 285 ntBASIC2.57□□□□□ -2
CHRNA1P02708 SNORA41-201ENST00000384675 132 ntBASIC2.57□□□□□ -2
CHRNA1P02708 RNU4-26P-201ENST00000410270 107 ntBASIC2.57□□□□□ -2
CHRNA1P02708 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC2.57□□□□□ -2
CHRNA1P02708 AC107081.1-201ENST00000414975 361 ntBASIC2.57□□□□□ -2
CHRNA1P02708 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC2.57□□□□□ -2
CHRNA1P02708 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC2.57□□□□□ -2
CHRNA1P02708 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.57□□□□□ -2
CHRNA1P02708 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC2.57□□□□□ -2
CHRNA1P02708 HMGB1P27-201ENST00000431429 603 ntBASIC2.57□□□□□ -2
CHRNA1P02708 AC098826.1-201ENST00000433943 471 ntBASIC2.57□□□□□ -2
CHRNA1P02708 AL445687.1-201ENST00000439946 251 ntBASIC2.57□□□□□ -2
CHRNA1P02708 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.57□□□□□ -2
CHRNA1P02708 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC2.57□□□□□ -2
CHRNA1P02708 RNU7-125P-201ENST00000458760 62 ntBASIC2.57□□□□□ -2
CHRNA1P02708 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC2.57□□□□□ -2
CHRNA1P02708 RBM43P1-201ENST00000476891 1081 ntBASIC2.57□□□□□ -2
CHRNA1P02708 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.57□□□□□ -2
CHRNA1P02708 AC055855.1-201ENST00000489563 579 ntBASIC2.57□□□□□ -2
CHRNA1P02708 AC105252.1-201ENST00000503089 286 ntBASIC2.57□□□□□ -2
CHRNA1P02708 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC2.57□□□□□ -2
CHRNA1P02708 SNORA31.18-201ENST00000517043 134 ntBASIC2.57□□□□□ -2
CHRNA1P02708 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC2.57□□□□□ -2
CHRNA1P02708 OR4R1P-201ENST00000529879 463 ntBASIC2.57□□□□□ -2
CHRNA1P02708 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC2.57□□□□□ -2
CHRNA1P02708 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.57□□□□□ -2
CHRNA1P02708 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.57□□□□□ -2
CHRNA1P02708 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.57□□□□□ -2
CHRNA1P02708 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.57□□□□□ -2
CHRNA1P02708 AC008751.2-201ENST00000597885 980 ntBASIC2.57□□□□□ -2
CHRNA1P02708 MTND4LP5-201ENST00000605152 292 ntBASIC2.57□□□□□ -2
CHRNA1P02708 BX664608.1-201ENST00000610519 487 ntBASIC2.57□□□□□ -2
CHRNA1P02708 AC090970.3-201ENST00000612566 866 ntBASIC2.57□□□□□ -2
CHRNA1P02708 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC2.57□□□□□ -2
CHRNA1P02708 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
CHRNA1P02708 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.57□□□□□ -2
CHRNA1P02708 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
CHRNA1P02708 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.57□□□□□ -2
CHRNA1P02708 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.56□□□□□ -2
CHRNA1P02708 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.56□□□□□ -2
CHRNA1P02708 RNU1-91P-201ENST00000364746 163 ntBASIC2.56□□□□□ -2
CHRNA1P02708 U8.14-201ENST00000390843 143 ntBASIC2.56□□□□□ -2
CHRNA1P02708 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.56□□□□□ -2
CHRNA1P02708 AL079342.1-201ENST00000401460 267 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 120 ms