Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 SUMO2P6-201ENST00000505273 288 ntBASIC1.45□□□□□ -2.18
COL4A1P02462 AC021146.8-201ENST00000507455 733 ntBASIC1.45□□□□□ -2.18
COL4A1P02462 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
COL4A1P02462 SNORA19.3-201ENST00000516165 130 ntBASIC1.45□□□□□ -2.18
COL4A1P02462 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC1.45□□□□□ -2.18
COL4A1P02462 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.45□□□□□ -2.18
COL4A1P02462 HSPA8P13-201ENST00000523715 472 ntBASIC1.45□□□□□ -2.18
COL4A1P02462 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.45□□□□□ -2.18
COL4A1P02462 AC118942.1-201ENST00000529674 1035 ntBASIC1.45□□□□□ -2.18
COL4A1P02462 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC1.45□□□□□ -2.18
COL4A1P02462 MGST1-215ENST00000540056 546 ntTSL 3 BASIC1.45□□□□□ -2.18
COL4A1P02462 SULT1C2P1-202ENST00000562418 459 ntBASIC1.45□□□□□ -2.18
COL4A1P02462 AC138915.2-201ENST00000569776 97 ntBASIC1.45□□□□□ -2.18
COL4A1P02462 AC009127.3-201ENST00000570531 403 ntBASIC1.45□□□□□ -2.18
COL4A1P02462 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC1.45□□□□□ -2.18
COL4A1P02462 AC004987.4-201ENST00000603383 338 ntBASIC1.45□□□□□ -2.18
COL4A1P02462 AC073413.2-201ENST00000604332 360 ntBASIC1.45□□□□□ -2.18
COL4A1P02462 AP001330.4-201ENST00000604350 154 ntBASIC1.45□□□□□ -2.18
COL4A1P02462 AF129408.1-201ENST00000608767 431 ntBASIC1.45□□□□□ -2.18
COL4A1P02462 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
COL4A1P02462 MIR6076-201ENST00000617521 113 ntBASIC1.45□□□□□ -2.18
COL4A1P02462 AC253576.2-201ENST00000618815 580 ntBASIC1.45□□□□□ -2.18
COL4A1P02462 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.45□□□□□ -2.18
COL4A1P02462 AC009318.4-201ENST00000620496 486 ntBASIC1.45□□□□□ -2.18
COL4A1P02462 AC109454.4-201ENST00000623411 649 ntBASIC1.45□□□□□ -2.18
COL4A1P02462 AP003476.1-201ENST00000623984 516 ntBASIC1.45□□□□□ -2.18
COL4A1P02462 AC079597.1-201ENST00000624306 508 ntBASIC1.45□□□□□ -2.18
COL4A1P02462 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC1.45□□□□□ -2.18
COL4A1P02462 AC013437.2-201ENST00000639587 677 ntBASIC1.45□□□□□ -2.18
COL4A1P02462 AL359851.1-201ENST00000569460 4997 ntBASIC1.45□□□□□ -2.18
COL4A1P02462 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.45□□□□□ -2.18
COL4A1P02462 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
COL4A1P02462 CDC27P3-201ENST00000635418 1910 ntBASIC1.45□□□□□ -2.18
COL4A1P02462 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
COL4A1P02462 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
COL4A1P02462 RNU6-1074P-201ENST00000383995 104 ntBASIC1.45□□□□□ -2.18
COL4A1P02462 SNORD116-12-201ENST00000384468 92 ntBASIC1.45□□□□□ -2.18
COL4A1P02462 AL355497.1-201ENST00000406262 551 ntBASIC1.45□□□□□ -2.18
COL4A1P02462 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC1.45□□□□□ -2.18
COL4A1P02462 RPS15AP38-201ENST00000413110 372 ntBASIC1.45□□□□□ -2.18
COL4A1P02462 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC1.45□□□□□ -2.18
COL4A1P02462 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
COL4A1P02462 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC1.45□□□□□ -2.18
COL4A1P02462 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC1.45□□□□□ -2.18
COL4A1P02462 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC1.45□□□□□ -2.18
COL4A1P02462 IPO7P1-201ENST00000442031 636 ntBASIC1.45□□□□□ -2.18
COL4A1P02462 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC1.45□□□□□ -2.18
COL4A1P02462 BMI1P1-201ENST00000445879 941 ntBASIC1.45□□□□□ -2.18
COL4A1P02462 SUMO2P2-201ENST00000456482 255 ntBASIC1.45□□□□□ -2.18
COL4A1P02462 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC1.45□□□□□ -2.18
COL4A1P02462 AL031183.1-201ENST00000457667 207 ntBASIC1.45□□□□□ -2.18
COL4A1P02462 PNPLA4P1-201ENST00000458328 305 ntBASIC1.45□□□□□ -2.18
COL4A1P02462 RPS23P3-201ENST00000470993 430 ntBASIC1.45□□□□□ -2.18
COL4A1P02462 RPS3AP22-201ENST00000488297 769 ntBASIC1.45□□□□□ -2.18
COL4A1P02462 AC026414.1-201ENST00000504046 698 ntBASIC1.45□□□□□ -2.18
COL4A1P02462 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
COL4A1P02462 HMGB3P3-201ENST00000510526 400 ntBASIC1.45□□□□□ -2.18
COL4A1P02462 AC105914.1-201ENST00000511798 226 ntBASIC1.45□□□□□ -2.18
COL4A1P02462 RNU1-104P-201ENST00000517280 175 ntBASIC1.45□□□□□ -2.18
COL4A1P02462 AC023632.1-201ENST00000518463 375 ntBASIC1.45□□□□□ -2.18
COL4A1P02462 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
COL4A1P02462 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC1.45□□□□□ -2.18
COL4A1P02462 CYCSP26-201ENST00000534107 320 ntBASIC1.45□□□□□ -2.18
COL4A1P02462 MED28P6-201ENST00000558776 231 ntBASIC1.45□□□□□ -2.18
COL4A1P02462 AC104072.1-201ENST00000568817 668 ntBASIC1.45□□□□□ -2.18
COL4A1P02462 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC1.45□□□□□ -2.18
COL4A1P02462 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC1.45□□□□□ -2.18
COL4A1P02462 AC069304.2-201ENST00000605154 435 ntBASIC1.45□□□□□ -2.18
COL4A1P02462 AP003485.1-201ENST00000625093 753 ntBASIC1.45□□□□□ -2.18
COL4A1P02462 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC1.45□□□□□ -2.18
COL4A1P02462 ZNF663P-202ENST00000641770 1131 ntBASIC1.45□□□□□ -2.18
COL4A1P02462 AP000648.3-201ENST00000623539 4507 ntBASIC1.45□□□□□ -2.18
COL4A1P02462 MTCO1P23-201ENST00000415223 1526 ntBASIC1.44□□□□□ -2.18
COL4A1P02462 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
COL4A1P02462 SGO1P2-201ENST00000429458 1589 ntBASIC1.44□□□□□ -2.18
COL4A1P02462 RNU6-839P-201ENST00000363347 108 ntBASIC1.44□□□□□ -2.18
COL4A1P02462 Y_RNA.408-201ENST00000383987 102 ntBASIC1.44□□□□□ -2.18
COL4A1P02462 MIR520E-201ENST00000384867 87 ntBASIC1.44□□□□□ -2.18
COL4A1P02462 AL079342.2-201ENST00000403367 482 ntBASIC1.44□□□□□ -2.18
COL4A1P02462 AL356131.1-201ENST00000405826 414 ntBASIC1.44□□□□□ -2.18
COL4A1P02462 MTCYBP34-201ENST00000439552 670 ntBASIC1.44□□□□□ -2.18
COL4A1P02462 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.44□□□□□ -2.18
COL4A1P02462 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.44□□□□□ -2.18
COL4A1P02462 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC1.44□□□□□ -2.18
COL4A1P02462 RPL7P18-201ENST00000478965 734 ntBASIC1.44□□□□□ -2.18
COL4A1P02462 AC096751.1-202ENST00000502691 1067 ntBASIC1.44□□□□□ -2.18
COL4A1P02462 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC1.44□□□□□ -2.18
COL4A1P02462 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC1.44□□□□□ -2.18
COL4A1P02462 RNU6-1223P-201ENST00000517124 104 ntBASIC1.44□□□□□ -2.18
COL4A1P02462 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
COL4A1P02462 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
COL4A1P02462 HSPE1P3-201ENST00000559254 309 ntBASIC1.44□□□□□ -2.18
COL4A1P02462 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC1.44□□□□□ -2.18
COL4A1P02462 VN1R87P-201ENST00000596706 487 ntBASIC1.44□□□□□ -2.18
COL4A1P02462 AC106791.2-201ENST00000604680 391 ntBASIC1.44□□□□□ -2.18
COL4A1P02462 AC106900.2-201ENST00000604994 317 ntBASIC1.44□□□□□ -2.18
COL4A1P02462 AC104763.3-201ENST00000613765 618 ntBASIC1.44□□□□□ -2.18
COL4A1P02462 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
COL4A1P02462 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
COL4A1P02462 MIR373-201ENST00000362273 69 ntBASIC1.43□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms