Protein–RNA interactions for Protein: O95484

CLDN9, Claudin-9, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9O95484 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.27□□□□□ -2.05
CLDN9O95484 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.27□□□□□ -2.05
CLDN9O95484 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.27□□□□□ -2.05
CLDN9O95484 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.27□□□□□ -2.05
CLDN9O95484 MTND4P27-201ENST00000450813 1354 ntBASIC2.26□□□□□ -2.05
CLDN9O95484 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
CLDN9O95484 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
CLDN9O95484 U3.12-201ENST00000364498 214 ntBASIC2.26□□□□□ -2.05
CLDN9O95484 XGY1-201ENST00000381172 446 ntBASIC2.26□□□□□ -2.05
CLDN9O95484 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
CLDN9O95484 RNU6-220P-201ENST00000390919 107 ntBASIC2.26□□□□□ -2.05
CLDN9O95484 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC2.26□□□□□ -2.05
CLDN9O95484 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC2.26□□□□□ -2.05
CLDN9O95484 SEPT2P1-201ENST00000419651 180 ntBASIC2.26□□□□□ -2.05
CLDN9O95484 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.26□□□□□ -2.05
CLDN9O95484 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC2.26□□□□□ -2.05
CLDN9O95484 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC2.26□□□□□ -2.05
CLDN9O95484 AL022400.1-201ENST00000423946 935 ntBASIC2.26□□□□□ -2.05
CLDN9O95484 MTCO3P30-201ENST00000426425 670 ntBASIC2.26□□□□□ -2.05
CLDN9O95484 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.26□□□□□ -2.05
CLDN9O95484 ZNF736P11Y-201ENST00000442535 1213 ntBASIC2.26□□□□□ -2.05
CLDN9O95484 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC2.26□□□□□ -2.05
CLDN9O95484 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC2.26□□□□□ -2.05
CLDN9O95484 TRBV1-201ENST00000476502 284 ntBASIC2.26□□□□□ -2.05
CLDN9O95484 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC2.26□□□□□ -2.05
CLDN9O95484 HSPE1P23-201ENST00000509838 286 ntBASIC2.26□□□□□ -2.05
CLDN9O95484 RNA5SP82-201ENST00000516707 92 ntBASIC2.26□□□□□ -2.05
CLDN9O95484 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC2.26□□□□□ -2.05
CLDN9O95484 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
CLDN9O95484 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC2.26□□□□□ -2.05
CLDN9O95484 MRPS36P5-201ENST00000551909 298 ntBASIC2.26□□□□□ -2.05
CLDN9O95484 AC023824.2-201ENST00000566185 400 ntBASIC2.26□□□□□ -2.05
CLDN9O95484 MIR3167-201ENST00000579623 85 ntBASIC2.26□□□□□ -2.05
CLDN9O95484 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC2.26□□□□□ -2.05
CLDN9O95484 AC073544.2-201ENST00000601155 540 ntBASIC2.26□□□□□ -2.05
CLDN9O95484 AL391813.1-201ENST00000603098 260 ntBASIC2.26□□□□□ -2.05
CLDN9O95484 AL450336.1-201ENST00000605180 586 ntBASIC2.26□□□□□ -2.05
CLDN9O95484 AC026790.2-201ENST00000606282 430 ntBASIC2.26□□□□□ -2.05
CLDN9O95484 AC103810.6-201ENST00000606708 136 ntBASIC2.26□□□□□ -2.05
CLDN9O95484 AC090970.3-201ENST00000612566 866 ntBASIC2.26□□□□□ -2.05
CLDN9O95484 AC011890.2-201ENST00000613393 294 ntBASIC2.26□□□□□ -2.05
CLDN9O95484 AC243829.7-201ENST00000633081 225 ntBASIC2.26□□□□□ -2.05
CLDN9O95484 AC010329.5-201ENST00000623497 2174 ntBASIC2.26□□□□□ -2.05
CLDN9O95484 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
CLDN9O95484 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC2.25□□□□□ -2.05
CLDN9O95484 Y_RNA.302-201ENST00000364997 102 ntBASIC2.25□□□□□ -2.05
CLDN9O95484 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.25□□□□□ -2.05
CLDN9O95484 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC2.25□□□□□ -2.05
CLDN9O95484 RNU6-701P-201ENST00000384059 107 ntBASIC2.25□□□□□ -2.05
CLDN9O95484 SNORA70B-201ENST00000384210 135 ntBASIC2.25□□□□□ -2.05
CLDN9O95484 RNU6-253P-201ENST00000384730 105 ntBASIC2.25□□□□□ -2.05
CLDN9O95484 MIR218-1-201ENST00000384999 110 ntBASIC2.25□□□□□ -2.05
CLDN9O95484 RPS4XP7-201ENST00000406274 780 ntBASIC2.25□□□□□ -2.05
CLDN9O95484 AC078974.1-201ENST00000411597 223 ntBASIC2.25□□□□□ -2.05
CLDN9O95484 AL008987.1-201ENST00000415528 237 ntBASIC2.25□□□□□ -2.05
CLDN9O95484 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC2.25□□□□□ -2.05
CLDN9O95484 ISCA1P1-201ENST00000426679 387 ntBASIC2.25□□□□□ -2.05
CLDN9O95484 TOMM20P4-201ENST00000427861 435 ntBASIC2.25□□□□□ -2.05
CLDN9O95484 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.25□□□□□ -2.05
CLDN9O95484 COX6CP12-201ENST00000446748 202 ntBASIC2.25□□□□□ -2.05
CLDN9O95484 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.25□□□□□ -2.05
CLDN9O95484 OR6C5P-201ENST00000452388 923 ntBASIC2.25□□□□□ -2.05
CLDN9O95484 AC233279.1-201ENST00000455300 423 ntBASIC2.25□□□□□ -2.05
CLDN9O95484 ANKRD26P4-201ENST00000455755 950 ntBASIC2.25□□□□□ -2.05
CLDN9O95484 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC2.25□□□□□ -2.05
CLDN9O95484 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.25□□□□□ -2.05
CLDN9O95484 AC139453.3-201ENST00000493276 369 ntBASIC2.25□□□□□ -2.05
CLDN9O95484 GZMAP1-201ENST00000503054 631 ntBASIC2.25□□□□□ -2.05
CLDN9O95484 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC2.25□□□□□ -2.05
CLDN9O95484 AC234781.5-201ENST00000508429 271 ntBASIC2.25□□□□□ -2.05
CLDN9O95484 AC008413.1-201ENST00000511864 177 ntBASIC2.25□□□□□ -2.05
CLDN9O95484 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.25□□□□□ -2.05
CLDN9O95484 SNORA31.3-201ENST00000516029 96 ntBASIC2.25□□□□□ -2.05
CLDN9O95484 RNU6-311P-201ENST00000516224 102 ntBASIC2.25□□□□□ -2.05
CLDN9O95484 RNU5A-4P-201ENST00000516588 111 ntBASIC2.25□□□□□ -2.05
CLDN9O95484 RNU1-104P-201ENST00000517280 175 ntBASIC2.25□□□□□ -2.05
CLDN9O95484 AC109329.2-201ENST00000519658 482 ntBASIC2.25□□□□□ -2.05
CLDN9O95484 AP002770.2-201ENST00000543613 532 ntBASIC2.25□□□□□ -2.05
CLDN9O95484 AC006199.1-201ENST00000548728 219 ntBASIC2.25□□□□□ -2.05
CLDN9O95484 AC091544.4-201ENST00000555268 342 ntBASIC2.25□□□□□ -2.05
CLDN9O95484 AC021739.1-201ENST00000559631 174 ntBASIC2.25□□□□□ -2.05
CLDN9O95484 BNIP3P40-201ENST00000596017 556 ntBASIC2.25□□□□□ -2.05
CLDN9O95484 AC005261.5-201ENST00000596280 355 ntBASIC2.25□□□□□ -2.05
CLDN9O95484 AC105148.1-201ENST00000604961 409 ntBASIC2.25□□□□□ -2.05
CLDN9O95484 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.25□□□□□ -2.05
CLDN9O95484 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.25□□□□□ -2.05
CLDN9O95484 AL078595.3-201ENST00000623815 1166 ntBASIC2.25□□□□□ -2.05
CLDN9O95484 OR4G3P-201ENST00000633500 913 ntBASIC2.25□□□□□ -2.05
CLDN9O95484 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC2.25□□□□□ -2.05
CLDN9O95484 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
CLDN9O95484 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.25□□□□□ -2.05
CLDN9O95484 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
CLDN9O95484 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
CLDN9O95484 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.24□□□□□ -2.05
CLDN9O95484 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.24□□□□□ -2.05
CLDN9O95484 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.24□□□□□ -2.05
CLDN9O95484 RNA5SP247-201ENST00000411181 105 ntBASIC2.24□□□□□ -2.05
CLDN9O95484 AC003685.2-201ENST00000422795 395 ntBASIC2.24□□□□□ -2.05
CLDN9O95484 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC2.24□□□□□ -2.05
CLDN9O95484 MYL8P-204ENST00000431574 518 ntBASIC2.24□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms