Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.74□□□□□ -1.81
VPS4BO75351 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.74□□□□□ -1.81
VPS4BO75351 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
VPS4BO75351 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.74□□□□□ -1.81
VPS4BO75351 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
VPS4BO75351 RPS4XP5-202ENST00000449995 1334 ntBASIC3.73□□□□□ -1.81
VPS4BO75351 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
VPS4BO75351 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
VPS4BO75351 MIR423-201ENST00000362201 94 ntBASIC3.73□□□□□ -1.81
VPS4BO75351 SNORD113-7-201ENST00000363762 77 ntBASIC3.73□□□□□ -1.81
VPS4BO75351 RNU6-371P-201ENST00000364283 108 ntBASIC3.73□□□□□ -1.81
VPS4BO75351 Y_RNA.339-201ENST00000365325 102 ntBASIC3.73□□□□□ -1.81
VPS4BO75351 RHEBP3-201ENST00000411920 351 ntBASIC3.73□□□□□ -1.81
VPS4BO75351 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.73□□□□□ -1.81
VPS4BO75351 HMGB1P27-201ENST00000431429 603 ntBASIC3.73□□□□□ -1.81
VPS4BO75351 RPS24P13-201ENST00000442520 397 ntBASIC3.73□□□□□ -1.81
VPS4BO75351 AC233279.1-201ENST00000455300 423 ntBASIC3.73□□□□□ -1.81
VPS4BO75351 PPP1R2P5-201ENST00000457256 603 ntBASIC3.73□□□□□ -1.81
VPS4BO75351 RNU7-167P-201ENST00000459160 62 ntBASIC3.73□□□□□ -1.81
VPS4BO75351 DYNLL1P5-201ENST00000467158 270 ntBASIC3.73□□□□□ -1.81
VPS4BO75351 OARD1-209ENST00000471367 401 ntTSL 2 BASIC3.73□□□□□ -1.81
VPS4BO75351 HIGD1AP13-201ENST00000509878 289 ntBASIC3.73□□□□□ -1.81
VPS4BO75351 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.73□□□□□ -1.81
VPS4BO75351 LIAS-206ENST00000513731 826 ntTSL 5 BASIC3.73□□□□□ -1.81
VPS4BO75351 RNA5SP179-201ENST00000517284 121 ntBASIC3.73□□□□□ -1.81
VPS4BO75351 RANP9-201ENST00000519957 271 ntBASIC3.73□□□□□ -1.81
VPS4BO75351 AP000889.2-201ENST00000532684 490 ntBASIC3.73□□□□□ -1.81
VPS4BO75351 AP004242.1-201ENST00000533701 349 ntBASIC3.73□□□□□ -1.81
VPS4BO75351 CYCSP30-201ENST00000546447 172 ntBASIC3.73□□□□□ -1.81
VPS4BO75351 YPEL5P3-201ENST00000547227 352 ntBASIC3.73□□□□□ -1.81
VPS4BO75351 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC3.73□□□□□ -1.81
VPS4BO75351 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.73□□□□□ -1.81
VPS4BO75351 AL355375.2-201ENST00000574825 175 ntBASIC3.73□□□□□ -1.81
VPS4BO75351 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.73□□□□□ -1.81
VPS4BO75351 MIR3942-201ENST00000585264 109 ntBASIC3.73□□□□□ -1.81
VPS4BO75351 AC092747.3-201ENST00000603769 301 ntBASIC3.73□□□□□ -1.81
VPS4BO75351 AC091167.4-201ENST00000605079 184 ntBASIC3.73□□□□□ -1.81
VPS4BO75351 AL158032.1-201ENST00000605401 106 ntBASIC3.73□□□□□ -1.81
VPS4BO75351 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.73□□□□□ -1.81
VPS4BO75351 AC090132.2-201ENST00000615881 347 ntBASIC3.73□□□□□ -1.81
VPS4BO75351 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.73□□□□□ -1.81
VPS4BO75351 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.73□□□□□ -1.81
VPS4BO75351 ZNF285B-201ENST00000561698 1767 ntBASIC3.73□□□□□ -1.81
VPS4BO75351 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.73□□□□□ -1.81
VPS4BO75351 USP8P1-201ENST00000494673 3183 ntBASIC3.73□□□□□ -1.81
VPS4BO75351 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.73□□□□□ -1.81
VPS4BO75351 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
VPS4BO75351 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
VPS4BO75351 OR4G2P-202ENST00000641004 1759 ntBASIC3.72□□□□□ -1.81
VPS4BO75351 SNORA31-201ENST00000362607 130 ntBASIC3.72□□□□□ -1.81
VPS4BO75351 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.72□□□□□ -1.81
VPS4BO75351 RNU6-254P-201ENST00000363377 107 ntBASIC3.72□□□□□ -1.81
VPS4BO75351 RNU6-288P-201ENST00000363690 104 ntBASIC3.72□□□□□ -1.81
VPS4BO75351 RNA5SP189-201ENST00000364920 115 ntBASIC3.72□□□□□ -1.81
VPS4BO75351 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
VPS4BO75351 XGY1-201ENST00000381172 446 ntBASIC3.72□□□□□ -1.81
VPS4BO75351 RNU6-1013P-201ENST00000384180 107 ntBASIC3.72□□□□□ -1.81
VPS4BO75351 Y_RNA.460-201ENST00000384255 102 ntBASIC3.72□□□□□ -1.81
VPS4BO75351 RNU6-434P-201ENST00000384376 107 ntBASIC3.72□□□□□ -1.81
VPS4BO75351 RNU6-1011P-201ENST00000384668 107 ntBASIC3.72□□□□□ -1.81
VPS4BO75351 MIR607-201ENST00000385241 96 ntBASIC3.72□□□□□ -1.81
VPS4BO75351 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
VPS4BO75351 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.72□□□□□ -1.81
VPS4BO75351 Z85995.1-201ENST00000415547 335 ntBASIC3.72□□□□□ -1.81
VPS4BO75351 AC091286.1-201ENST00000431233 461 ntBASIC3.72□□□□□ -1.81
VPS4BO75351 HMGB3P11-201ENST00000440127 604 ntBASIC3.72□□□□□ -1.81
VPS4BO75351 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.72□□□□□ -1.81
VPS4BO75351 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.72□□□□□ -1.81
VPS4BO75351 RPS20P22-201ENST00000473700 357 ntBASIC3.72□□□□□ -1.81
VPS4BO75351 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
VPS4BO75351 AL359273.1-201ENST00000510918 627 ntBASIC3.72□□□□□ -1.81
VPS4BO75351 RNU6-914P-201ENST00000516749 109 ntBASIC3.72□□□□□ -1.81
VPS4BO75351 HPRT1P3-201ENST00000539521 576 ntBASIC3.72□□□□□ -1.81
VPS4BO75351 MIR3200-201ENST00000580767 85 ntBASIC3.72□□□□□ -1.81
VPS4BO75351 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.72□□□□□ -1.81
VPS4BO75351 MIR3941-201ENST00000582572 103 ntBASIC3.72□□□□□ -1.81
VPS4BO75351 AC007687.1-201ENST00000602704 304 ntBASIC3.72□□□□□ -1.81
VPS4BO75351 AP001330.4-201ENST00000604350 154 ntBASIC3.72□□□□□ -1.81
VPS4BO75351 MIR1302-1-201ENST00000637932 143 ntBASIC3.72□□□□□ -1.81
VPS4BO75351 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
VPS4BO75351 MTND4P23-201ENST00000447723 1363 ntBASIC3.72□□□□□ -1.81
VPS4BO75351 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
VPS4BO75351 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.72□□□□□ -1.81
VPS4BO75351 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
VPS4BO75351 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
VPS4BO75351 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.71□□□□□ -1.81
VPS4BO75351 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.81
VPS4BO75351 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
VPS4BO75351 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.71□□□□□ -1.82
VPS4BO75351 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.71□□□□□ -1.82
VPS4BO75351 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.71□□□□□ -1.82
VPS4BO75351 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
VPS4BO75351 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
VPS4BO75351 Y_RNA.111-201ENST00000363248 100 ntBASIC3.71□□□□□ -1.82
VPS4BO75351 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
VPS4BO75351 MIR1290-201ENST00000408735 78 ntBASIC3.71□□□□□ -1.82
VPS4BO75351 RNA5SP111-201ENST00000411386 101 ntBASIC3.71□□□□□ -1.82
VPS4BO75351 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.71□□□□□ -1.82
VPS4BO75351 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.71□□□□□ -1.82
VPS4BO75351 AL049874.1-201ENST00000489560 388 ntBASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms