Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 HMGN2P26-201ENST00000463169 339 ntBASIC3.08□□□□□ -1.92
ZIC3O60481 RPL21P10-201ENST00000463521 490 ntBASIC3.08□□□□□ -1.92
ZIC3O60481 RPL7P49-201ENST00000471402 708 ntBASIC3.08□□□□□ -1.92
ZIC3O60481 AC012181.1-201ENST00000479895 423 ntBASIC3.08□□□□□ -1.92
ZIC3O60481 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC3.08□□□□□ -1.92
ZIC3O60481 RPL30P5-201ENST00000494923 336 ntBASIC3.08□□□□□ -1.92
ZIC3O60481 MTCO2P30-201ENST00000503662 364 ntBASIC3.08□□□□□ -1.92
ZIC3O60481 SUMO2P6-201ENST00000505273 288 ntBASIC3.08□□□□□ -1.92
ZIC3O60481 CCDC34P1-201ENST00000507441 517 ntBASIC3.08□□□□□ -1.92
ZIC3O60481 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC3.08□□□□□ -1.92
ZIC3O60481 RNU1-61P-201ENST00000516107 151 ntBASIC3.08□□□□□ -1.92
ZIC3O60481 MTND4P7-201ENST00000523876 130 ntBASIC3.08□□□□□ -1.92
ZIC3O60481 AP001804.3-201ENST00000525146 880 ntBASIC3.08□□□□□ -1.92
ZIC3O60481 CASP1P1-201ENST00000526345 212 ntBASIC3.08□□□□□ -1.92
ZIC3O60481 MDM2-233ENST00000545204 398 ntTSL 5 BASIC3.08□□□□□ -1.92
ZIC3O60481 SYF2P1-201ENST00000550658 413 ntBASIC3.08□□□□□ -1.92
ZIC3O60481 AC078814.3-201ENST00000553036 491 ntBASIC3.08□□□□□ -1.92
ZIC3O60481 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.08□□□□□ -1.92
ZIC3O60481 TRAV28-201ENST00000557548 323 ntBASIC3.08□□□□□ -1.92
ZIC3O60481 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3.08□□□□□ -1.92
ZIC3O60481 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.08□□□□□ -1.92
ZIC3O60481 BNIP3P22-201ENST00000593399 556 ntBASIC3.08□□□□□ -1.92
ZIC3O60481 BNIP3P9-201ENST00000603714 553 ntBASIC3.08□□□□□ -1.92
ZIC3O60481 BNIP3P10-201ENST00000605360 577 ntBASIC3.08□□□□□ -1.92
ZIC3O60481 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC3.08□□□□□ -1.92
ZIC3O60481 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.08□□□□□ -1.92
ZIC3O60481 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.08□□□□□ -1.92
ZIC3O60481 AC092794.2-201ENST00000620933 563 ntBASIC3.08□□□□□ -1.92
ZIC3O60481 U6.98-201ENST00000637157 84 ntBASIC3.08□□□□□ -1.92
ZIC3O60481 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.08□□□□□ -1.92
ZIC3O60481 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.08□□□□□ -1.92
ZIC3O60481 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
ZIC3O60481 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
ZIC3O60481 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
ZIC3O60481 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
ZIC3O60481 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
ZIC3O60481 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
ZIC3O60481 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.07□□□□□ -1.92
ZIC3O60481 RNA5SP72-201ENST00000364442 117 ntBASIC3.07□□□□□ -1.92
ZIC3O60481 SNORA4.3-201ENST00000365564 137 ntBASIC3.07□□□□□ -1.92
ZIC3O60481 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
ZIC3O60481 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
ZIC3O60481 RNVU1-14-201ENST00000384770 164 ntBASIC3.07□□□□□ -1.92
ZIC3O60481 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.07□□□□□ -1.92
ZIC3O60481 RNA5SP111-201ENST00000411386 101 ntBASIC3.07□□□□□ -1.92
ZIC3O60481 EEF1A1P40-201ENST00000412883 573 ntBASIC3.07□□□□□ -1.92
ZIC3O60481 Z99755.1-201ENST00000414048 380 ntBASIC3.07□□□□□ -1.92
ZIC3O60481 AC007919.1-201ENST00000429380 217 ntBASIC3.07□□□□□ -1.92
ZIC3O60481 AL158071.1-201ENST00000430315 461 ntBASIC3.07□□□□□ -1.92
ZIC3O60481 AC005019.1-201ENST00000436455 431 ntBASIC3.07□□□□□ -1.92
ZIC3O60481 AL121601.2-201ENST00000438019 707 ntBASIC3.07□□□□□ -1.92
ZIC3O60481 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC3.07□□□□□ -1.92
ZIC3O60481 MTND3P10-201ENST00000450967 341 ntBASIC3.07□□□□□ -1.92
ZIC3O60481 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC3.07□□□□□ -1.92
ZIC3O60481 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.07□□□□□ -1.92
ZIC3O60481 FABP5P15-201ENST00000453566 214 ntBASIC3.07□□□□□ -1.92
ZIC3O60481 KC877373.1-201ENST00000479066 408 ntBASIC3.07□□□□□ -1.92
ZIC3O60481 RPL21P99-201ENST00000480369 423 ntBASIC3.07□□□□□ -1.92
ZIC3O60481 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC3.07□□□□□ -1.92
ZIC3O60481 RPL21P13-201ENST00000488305 481 ntBASIC3.07□□□□□ -1.92
ZIC3O60481 AC074250.1-201ENST00000511117 192 ntBASIC3.07□□□□□ -1.92
ZIC3O60481 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.07□□□□□ -1.92
ZIC3O60481 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.07□□□□□ -1.92
ZIC3O60481 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.07□□□□□ -1.92
ZIC3O60481 CENPUP1-201ENST00000526649 1202 ntBASIC3.07□□□□□ -1.92
ZIC3O60481 AL118558.2-201ENST00000556294 238 ntBASIC3.07□□□□□ -1.92
ZIC3O60481 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.07□□□□□ -1.92
ZIC3O60481 MIR3944-201ENST00000581277 108 ntBASIC3.07□□□□□ -1.92
ZIC3O60481 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.07□□□□□ -1.92
ZIC3O60481 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.07□□□□□ -1.92
ZIC3O60481 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.07□□□□□ -1.92
ZIC3O60481 AC009570.1-201ENST00000609599 745 ntBASIC3.07□□□□□ -1.92
ZIC3O60481 U7.8-201ENST00000619968 63 ntBASIC3.07□□□□□ -1.92
ZIC3O60481 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.07□□□□□ -1.92
ZIC3O60481 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.07□□□□□ -1.92
ZIC3O60481 AC009033.1-201ENST00000624279 431 ntBASIC3.07□□□□□ -1.92
ZIC3O60481 AL008636.1-201ENST00000625038 1018 ntBASIC3.07□□□□□ -1.92
ZIC3O60481 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.07□□□□□ -1.92
ZIC3O60481 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.07□□□□□ -1.92
ZIC3O60481 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.07□□□□□ -1.92
ZIC3O60481 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.07□□□□□ -1.92
ZIC3O60481 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.06□□□□□ -1.92
ZIC3O60481 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.06□□□□□ -1.92
ZIC3O60481 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.06□□□□□ -1.92
ZIC3O60481 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.06□□□□□ -1.92
ZIC3O60481 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.06□□□□□ -1.92
ZIC3O60481 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
ZIC3O60481 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
ZIC3O60481 MIR208A-201ENST00000362287 71 ntBASIC3.06□□□□□ -1.92
ZIC3O60481 Y_RNA.160-201ENST00000363677 92 ntBASIC3.06□□□□□ -1.92
ZIC3O60481 RNU6-522P-201ENST00000364497 107 ntBASIC3.06□□□□□ -1.92
ZIC3O60481 Y_RNA.279-201ENST00000364763 95 ntBASIC3.06□□□□□ -1.92
ZIC3O60481 RNA5SP267-201ENST00000364893 126 ntBASIC3.06□□□□□ -1.92
ZIC3O60481 RNU6-867P-201ENST00000364956 107 ntBASIC3.06□□□□□ -1.92
ZIC3O60481 RNU4-66P-201ENST00000365199 138 ntBASIC3.06□□□□□ -1.92
ZIC3O60481 AL592114.1-201ENST00000403842 483 ntBASIC3.06□□□□□ -1.92
ZIC3O60481 RPL21P111-201ENST00000418453 477 ntBASIC3.06□□□□□ -1.92
ZIC3O60481 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC3.06□□□□□ -1.92
ZIC3O60481 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC3.06□□□□□ -1.92
ZIC3O60481 AC092047.1-201ENST00000424997 240 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms