Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
FOXN1O15353 XPOTP1-201ENST00000443317 2398 ntBASIC4.1□□□□□ -1.75
FOXN1O15353 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
FOXN1O15353 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.1□□□□□ -1.75
FOXN1O15353 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC4.1□□□□□ -1.75
FOXN1O15353 RNU6-522P-201ENST00000364497 107 ntBASIC4.1□□□□□ -1.75
FOXN1O15353 Y_RNA.367-201ENST00000365544 101 ntBASIC4.1□□□□□ -1.75
FOXN1O15353 MDM4-202ENST00000367180 547 ntTSL 3 BASIC4.1□□□□□ -1.75
FOXN1O15353 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC4.1□□□□□ -1.75
FOXN1O15353 AC012065.2-201ENST00000421295 375 ntBASIC4.1□□□□□ -1.75
FOXN1O15353 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC4.1□□□□□ -1.75
FOXN1O15353 RPS20P5-201ENST00000434808 360 ntBASIC4.1□□□□□ -1.75
FOXN1O15353 YWHAZP8-201ENST00000436935 731 ntBASIC4.1□□□□□ -1.75
FOXN1O15353 HMGB3P11-201ENST00000440127 604 ntBASIC4.1□□□□□ -1.75
FOXN1O15353 HSPE1P28-201ENST00000443139 211 ntBASIC4.1□□□□□ -1.75
FOXN1O15353 AC005297.2-201ENST00000450430 606 ntBASIC4.1□□□□□ -1.75
FOXN1O15353 MTATP8P1-201ENST00000467115 207 ntBASIC4.1□□□□□ -1.75
FOXN1O15353 S100A11P1-201ENST00000477525 312 ntBASIC4.1□□□□□ -1.75
FOXN1O15353 RAD51AP1P1-201ENST00000484195 1001 ntBASIC4.1□□□□□ -1.75
FOXN1O15353 AC083904.1-201ENST00000487828 231 ntBASIC4.1□□□□□ -1.75
FOXN1O15353 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC4.1□□□□□ -1.75
FOXN1O15353 SNORD116-26-201ENST00000516006 96 ntBASIC4.1□□□□□ -1.75
FOXN1O15353 RNU6-864P-201ENST00000516256 108 ntBASIC4.1□□□□□ -1.75
FOXN1O15353 SNORD27.1-201ENST00000516319 72 ntBASIC4.1□□□□□ -1.75
FOXN1O15353 RNU6-1088P-201ENST00000516850 104 ntBASIC4.1□□□□□ -1.75
FOXN1O15353 RN7SKP96-201ENST00000516948 297 ntBASIC4.1□□□□□ -1.75
FOXN1O15353 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC4.1□□□□□ -1.75
FOXN1O15353 AP001804.3-201ENST00000525146 880 ntBASIC4.1□□□□□ -1.75
FOXN1O15353 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
FOXN1O15353 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC4.1□□□□□ -1.75
FOXN1O15353 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC4.1□□□□□ -1.75
FOXN1O15353 MIR3942-201ENST00000585264 109 ntBASIC4.1□□□□□ -1.75
FOXN1O15353 AL353997.4-201ENST00000586196 166 ntBASIC4.1□□□□□ -1.75
FOXN1O15353 AL669831.4-202ENST00000590817 238 ntBASIC4.1□□□□□ -1.75
FOXN1O15353 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC4.1□□□□□ -1.75
FOXN1O15353 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC4.1□□□□□ -1.75
FOXN1O15353 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC4.1□□□□□ -1.75
FOXN1O15353 AC130324.3-201ENST00000614165 542 ntBASIC4.1□□□□□ -1.75
FOXN1O15353 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC4.1□□□□□ -1.75
FOXN1O15353 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
FOXN1O15353 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
FOXN1O15353 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
FOXN1O15353 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.09□□□□□ -1.75
FOXN1O15353 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
FOXN1O15353 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
FOXN1O15353 SNORA51.6-201ENST00000384151 125 ntBASIC4.09□□□□□ -1.75
FOXN1O15353 MIR887-201ENST00000401258 79 ntBASIC4.09□□□□□ -1.75
FOXN1O15353 AL356421.1-201ENST00000403255 413 ntBASIC4.09□□□□□ -1.75
FOXN1O15353 MIR548K-201ENST00000408406 116 ntBASIC4.09□□□□□ -1.75
FOXN1O15353 MIR548F4-201ENST00000408515 105 ntBASIC4.09□□□□□ -1.75
FOXN1O15353 RNU6-370P-201ENST00000411008 104 ntBASIC4.09□□□□□ -1.75
FOXN1O15353 RPL30P2-201ENST00000414021 291 ntBASIC4.09□□□□□ -1.75
FOXN1O15353 AC017079.2-201ENST00000416102 485 ntBASIC4.09□□□□□ -1.75
FOXN1O15353 AC114482.1-201ENST00000418010 247 ntBASIC4.09□□□□□ -1.75
FOXN1O15353 ATP6V0E1P4-201ENST00000427294 242 ntBASIC4.09□□□□□ -1.75
FOXN1O15353 RPL7L1P10-201ENST00000427790 463 ntBASIC4.09□□□□□ -1.75
FOXN1O15353 OR4K11P-201ENST00000431829 904 ntBASIC4.09□□□□□ -1.75
FOXN1O15353 RPL23AP74-201ENST00000437246 471 ntBASIC4.09□□□□□ -1.75
FOXN1O15353 KRTAP19-11P-201ENST00000439851 104 ntBASIC4.09□□□□□ -1.75
FOXN1O15353 Z98949.2-201ENST00000440996 144 ntBASIC4.09□□□□□ -1.75
FOXN1O15353 AL731563.1-201ENST00000442202 214 ntBASIC4.09□□□□□ -1.75
FOXN1O15353 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC4.09□□□□□ -1.75
FOXN1O15353 PRPS1P1-201ENST00000445305 876 ntBASIC4.09□□□□□ -1.75
FOXN1O15353 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC4.09□□□□□ -1.75
FOXN1O15353 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.09□□□□□ -1.75
FOXN1O15353 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC4.09□□□□□ -1.75
FOXN1O15353 RN7SKP219-201ENST00000516825 296 ntBASIC4.09□□□□□ -1.75
FOXN1O15353 RNU6-273P-201ENST00000516937 96 ntBASIC4.09□□□□□ -1.75
FOXN1O15353 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC4.09□□□□□ -1.75
FOXN1O15353 CASP1-212ENST00000531166 300 ntTSL 5 BASIC4.09□□□□□ -1.75
FOXN1O15353 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC4.09□□□□□ -1.75
FOXN1O15353 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.09□□□□□ -1.75
FOXN1O15353 AC008269.2-201ENST00000561915 1105 ntBASIC4.09□□□□□ -1.75
FOXN1O15353 OR4K8P-201ENST00000578842 1048 ntBASIC4.09□□□□□ -1.75
FOXN1O15353 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC4.09□□□□□ -1.75
FOXN1O15353 GLUD1P4-201ENST00000590914 418 ntBASIC4.09□□□□□ -1.75
FOXN1O15353 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC4.09□□□□□ -1.75
FOXN1O15353 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC4.09□□□□□ -1.75
FOXN1O15353 ASNSP1-201ENST00000518311 1939 ntBASIC4.09□□□□□ -1.76
FOXN1O15353 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.09□□□□□ -1.76
FOXN1O15353 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
FOXN1O15353 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
FOXN1O15353 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.08□□□□□ -1.76
FOXN1O15353 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
FOXN1O15353 AL161781.1-201ENST00000354277 403 ntBASIC4.08□□□□□ -1.76
FOXN1O15353 Y_RNA.148-201ENST00000363557 117 ntBASIC4.08□□□□□ -1.76
FOXN1O15353 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
FOXN1O15353 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
FOXN1O15353 Y_RNA.414-201ENST00000384011 101 ntBASIC4.08□□□□□ -1.76
FOXN1O15353 RNU6-39P-201ENST00000384344 107 ntBASIC4.08□□□□□ -1.76
FOXN1O15353 RNU6-441P-201ENST00000384545 106 ntBASIC4.08□□□□□ -1.76
FOXN1O15353 RNU6-985P-201ENST00000410182 104 ntBASIC4.08□□□□□ -1.76
FOXN1O15353 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC4.08□□□□□ -1.76
FOXN1O15353 HSPA8P1-201ENST00000425843 1833 ntBASIC4.08□□□□□ -1.76
FOXN1O15353 AC096632.1-201ENST00000427395 310 ntBASIC4.08□□□□□ -1.76
FOXN1O15353 AC137499.1-201ENST00000427602 88 ntBASIC4.08□□□□□ -1.76
FOXN1O15353 TXNP1-201ENST00000441872 371 ntBASIC4.08□□□□□ -1.76
FOXN1O15353 TRAPPC2P3-201ENST00000443200 321 ntBASIC4.08□□□□□ -1.76
FOXN1O15353 ELL2P4-201ENST00000446870 1376 ntBASIC4.08□□□□□ -1.76
FOXN1O15353 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms