Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 AL358934.1-201ENST00000432346 324 ntBASIC3.25□□□□□ -1.89
ATP2A1O14983 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC3.25□□□□□ -1.89
ATP2A1O14983 AC244505.4-201ENST00000434905 287 ntBASIC3.25□□□□□ -1.89
ATP2A1O14983 HMGB3P12-201ENST00000438745 556 ntBASIC3.25□□□□□ -1.89
ATP2A1O14983 SSXP5-201ENST00000443473 287 ntBASIC3.25□□□□□ -1.89
ATP2A1O14983 AC009237.8-201ENST00000445492 379 ntBASIC3.25□□□□□ -1.89
ATP2A1O14983 CBWD4P-201ENST00000445695 655 ntBASIC3.25□□□□□ -1.89
ATP2A1O14983 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC3.25□□□□□ -1.89
ATP2A1O14983 MTCYBP1-201ENST00000454315 1119 ntBASIC3.25□□□□□ -1.89
ATP2A1O14983 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.25□□□□□ -1.89
ATP2A1O14983 RN7SL75P-201ENST00000461926 281 ntBASIC3.25□□□□□ -1.89
ATP2A1O14983 RPS20P22-201ENST00000473700 357 ntBASIC3.25□□□□□ -1.89
ATP2A1O14983 RN7SL283P-201ENST00000489055 303 ntBASIC3.25□□□□□ -1.89
ATP2A1O14983 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC3.25□□□□□ -1.89
ATP2A1O14983 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.25□□□□□ -1.89
ATP2A1O14983 RN7SKP43-201ENST00000516173 320 ntBASIC3.25□□□□□ -1.89
ATP2A1O14983 RNU6-927P-201ENST00000516199 100 ntBASIC3.25□□□□□ -1.89
ATP2A1O14983 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC3.25□□□□□ -1.89
ATP2A1O14983 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC3.25□□□□□ -1.89
ATP2A1O14983 AC002545.1-201ENST00000592511 181 ntBASIC3.25□□□□□ -1.89
ATP2A1O14983 AL136363.1-201ENST00000605349 337 ntBASIC3.25□□□□□ -1.89
ATP2A1O14983 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC3.25□□□□□ -1.89
ATP2A1O14983 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.25□□□□□ -1.89
ATP2A1O14983 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
ATP2A1O14983 MTND5P26-201ENST00000426018 1752 ntBASIC3.25□□□□□ -1.89
ATP2A1O14983 AC103988.1-201ENST00000566382 2177 ntBASIC3.24□□□□□ -1.89
ATP2A1O14983 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
ATP2A1O14983 RNU6-960P-201ENST00000364056 120 ntBASIC3.24□□□□□ -1.89
ATP2A1O14983 RNU6-108P-201ENST00000365558 107 ntBASIC3.24□□□□□ -1.89
ATP2A1O14983 RNU6-1197P-201ENST00000391183 107 ntBASIC3.24□□□□□ -1.89
ATP2A1O14983 RNA5SP21-201ENST00000410917 96 ntBASIC3.24□□□□□ -1.89
ATP2A1O14983 GPR143P-201ENST00000434155 205 ntBASIC3.24□□□□□ -1.89
ATP2A1O14983 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.24□□□□□ -1.89
ATP2A1O14983 DNAJC19P4-201ENST00000440115 345 ntBASIC3.24□□□□□ -1.89
ATP2A1O14983 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.24□□□□□ -1.89
ATP2A1O14983 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC3.24□□□□□ -1.89
ATP2A1O14983 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
ATP2A1O14983 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC3.24□□□□□ -1.89
ATP2A1O14983 RPL30P5-201ENST00000494923 336 ntBASIC3.24□□□□□ -1.89
ATP2A1O14983 RPL37P25-201ENST00000507308 276 ntBASIC3.24□□□□□ -1.89
ATP2A1O14983 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC3.24□□□□□ -1.89
ATP2A1O14983 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.24□□□□□ -1.89
ATP2A1O14983 SCARNA24.1-201ENST00000516465 137 ntBASIC3.24□□□□□ -1.89
ATP2A1O14983 HMGB1P41-201ENST00000520234 440 ntBASIC3.24□□□□□ -1.89
ATP2A1O14983 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC3.24□□□□□ -1.89
ATP2A1O14983 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC3.24□□□□□ -1.89
ATP2A1O14983 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.24□□□□□ -1.89
ATP2A1O14983 AC009570.1-201ENST00000609599 745 ntBASIC3.24□□□□□ -1.89
ATP2A1O14983 AC122108.2-201ENST00000611946 526 ntBASIC3.24□□□□□ -1.89
ATP2A1O14983 AC006111.3-201ENST00000622137 383 ntBASIC3.24□□□□□ -1.89
ATP2A1O14983 AC138649.3-201ENST00000622154 254 ntBASIC3.24□□□□□ -1.89
ATP2A1O14983 AC098679.4-201ENST00000624241 654 ntBASIC3.24□□□□□ -1.89
ATP2A1O14983 AC084035.1-201ENST00000634543 607 ntBASIC3.24□□□□□ -1.89
ATP2A1O14983 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
ATP2A1O14983 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
ATP2A1O14983 CUL1P1-201ENST00000509510 2425 ntBASIC3.23□□□□□ -1.89
ATP2A1O14983 MTND5P19-201ENST00000424872 1794 ntBASIC3.23□□□□□ -1.89
ATP2A1O14983 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
ATP2A1O14983 AC073343.1-201ENST00000328239 651 ntBASIC3.23□□□□□ -1.89
ATP2A1O14983 RNU6-741P-201ENST00000383889 107 ntBASIC3.23□□□□□ -1.89
ATP2A1O14983 RNU6-701P-201ENST00000384059 107 ntBASIC3.23□□□□□ -1.89
ATP2A1O14983 RPS4XP8-201ENST00000402039 771 ntBASIC3.23□□□□□ -1.89
ATP2A1O14983 AL138827.1-201ENST00000402666 306 ntBASIC3.23□□□□□ -1.89
ATP2A1O14983 Z85995.1-201ENST00000415547 335 ntBASIC3.23□□□□□ -1.89
ATP2A1O14983 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC3.23□□□□□ -1.89
ATP2A1O14983 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.23□□□□□ -1.89
ATP2A1O14983 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC3.23□□□□□ -1.89
ATP2A1O14983 MTCO2P11-201ENST00000431069 680 ntBASIC3.23□□□□□ -1.89
ATP2A1O14983 AC009969.1-201ENST00000438726 172 ntBASIC3.23□□□□□ -1.89
ATP2A1O14983 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC3.23□□□□□ -1.89
ATP2A1O14983 AC079781.2-201ENST00000446424 169 ntBASIC3.23□□□□□ -1.89
ATP2A1O14983 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC3.23□□□□□ -1.89
ATP2A1O14983 AC132479.1-201ENST00000449160 144 ntBASIC3.23□□□□□ -1.89
ATP2A1O14983 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC3.23□□□□□ -1.89
ATP2A1O14983 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.23□□□□□ -1.89
ATP2A1O14983 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.23□□□□□ -1.89
ATP2A1O14983 SNORD109B-201ENST00000458961 67 ntBASIC3.23□□□□□ -1.89
ATP2A1O14983 SNORD109A-201ENST00000459128 67 ntBASIC3.23□□□□□ -1.89
ATP2A1O14983 AC091179.1-201ENST00000461606 579 ntBASIC3.23□□□□□ -1.89
ATP2A1O14983 KC877373.1-201ENST00000479066 408 ntBASIC3.23□□□□□ -1.89
ATP2A1O14983 AC108078.1-201ENST00000508073 725 ntBASIC3.23□□□□□ -1.89
ATP2A1O14983 TTC39CP1-201ENST00000512513 755 ntBASIC3.23□□□□□ -1.89
ATP2A1O14983 AC010493.1-201ENST00000513479 292 ntBASIC3.23□□□□□ -1.89
ATP2A1O14983 SNORA31.3-201ENST00000516029 96 ntBASIC3.23□□□□□ -1.89
ATP2A1O14983 RNU6-720P-201ENST00000516363 108 ntBASIC3.23□□□□□ -1.89
ATP2A1O14983 RNU6-410P-201ENST00000517006 107 ntBASIC3.23□□□□□ -1.89
ATP2A1O14983 AP006587.4-201ENST00000526053 529 ntBASIC3.23□□□□□ -1.89
ATP2A1O14983 ATP5F1P5-201ENST00000526403 760 ntBASIC3.23□□□□□ -1.89
ATP2A1O14983 AC022880.1-201ENST00000534017 973 ntBASIC3.23□□□□□ -1.89
ATP2A1O14983 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC3.23□□□□□ -1.89
ATP2A1O14983 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.23□□□□□ -1.89
ATP2A1O14983 NRBF2P5-201ENST00000603087 788 ntBASIC3.23□□□□□ -1.89
ATP2A1O14983 AL035413.2-201ENST00000604801 525 ntBASIC3.23□□□□□ -1.89
ATP2A1O14983 AC007619.2-201ENST00000605743 379 ntBASIC3.23□□□□□ -1.89
ATP2A1O14983 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC3.23□□□□□ -1.89
ATP2A1O14983 AC002076.2-201ENST00000617362 122 ntBASIC3.23□□□□□ -1.89
ATP2A1O14983 LRRC77P-213ENST00000637727 880 ntBASIC3.23□□□□□ -1.89
ATP2A1O14983 GABRG2-229ENST00000641017 3628 ntBASIC3.23□□□□□ -1.89
ATP2A1O14983 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
ATP2A1O14983 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 132.9 ms