Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 FO082796.1-201ENST00000523795 183 ntBASIC3.74□□□□□ -1.81
TRIM38O00635 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC3.74□□□□□ -1.81
TRIM38O00635 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC3.74□□□□□ -1.81
TRIM38O00635 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.74□□□□□ -1.81
TRIM38O00635 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.74□□□□□ -1.81
TRIM38O00635 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.74□□□□□ -1.81
TRIM38O00635 MIR5187-201ENST00000583479 76 ntBASIC3.74□□□□□ -1.81
TRIM38O00635 AC008737.2-201ENST00000599446 118 ntBASIC3.74□□□□□ -1.81
TRIM38O00635 AC174048.1-201ENST00000603389 144 ntBASIC3.74□□□□□ -1.81
TRIM38O00635 AC113139.1-201ENST00000605049 239 ntBASIC3.74□□□□□ -1.81
TRIM38O00635 AC007998.5-201ENST00000622938 237 ntBASIC3.74□□□□□ -1.81
TRIM38O00635 AC009161.2-201ENST00000624626 138 ntBASIC3.74□□□□□ -1.81
TRIM38O00635 AC100810.6-201ENST00000638068 285 ntBASIC3.74□□□□□ -1.81
TRIM38O00635 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
TRIM38O00635 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.74□□□□□ -1.81
TRIM38O00635 OTUD4P1-201ENST00000237841 3067 ntBASIC3.74□□□□□ -1.81
TRIM38O00635 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC3.73□□□□□ -1.81
TRIM38O00635 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
TRIM38O00635 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.73□□□□□ -1.81
TRIM38O00635 Y_RNA.133-201ENST00000363428 110 ntBASIC3.73□□□□□ -1.81
TRIM38O00635 Y_RNA.145-201ENST00000363527 102 ntBASIC3.73□□□□□ -1.81
TRIM38O00635 RNU6-525P-201ENST00000363685 104 ntBASIC3.73□□□□□ -1.81
TRIM38O00635 SNORA4.3-201ENST00000365564 137 ntBASIC3.73□□□□□ -1.81
TRIM38O00635 SNORD42.2-201ENST00000365570 69 ntBASIC3.73□□□□□ -1.81
TRIM38O00635 SMIM11P1-201ENST00000369586 178 ntBASIC3.73□□□□□ -1.81
TRIM38O00635 MIR559-201ENST00000385188 96 ntBASIC3.73□□□□□ -1.81
TRIM38O00635 RNU6-1068P-201ENST00000410958 103 ntBASIC3.73□□□□□ -1.81
TRIM38O00635 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC3.73□□□□□ -1.81
TRIM38O00635 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.73□□□□□ -1.81
TRIM38O00635 RPL36AP53-201ENST00000432891 316 ntBASIC3.73□□□□□ -1.81
TRIM38O00635 RPS20P5-201ENST00000434808 360 ntBASIC3.73□□□□□ -1.81
TRIM38O00635 RPL7P12-201ENST00000446719 750 ntBASIC3.73□□□□□ -1.81
TRIM38O00635 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.73□□□□□ -1.81
TRIM38O00635 RNU7-170P-201ENST00000459303 61 ntBASIC3.73□□□□□ -1.81
TRIM38O00635 RN7SKP209-201ENST00000516888 304 ntBASIC3.73□□□□□ -1.81
TRIM38O00635 AC107953.1-201ENST00000522216 297 ntBASIC3.73□□□□□ -1.81
TRIM38O00635 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC3.73□□□□□ -1.81
TRIM38O00635 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.73□□□□□ -1.81
TRIM38O00635 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.73□□□□□ -1.81
TRIM38O00635 DNAJC8P1-201ENST00000554535 372 ntBASIC3.73□□□□□ -1.81
TRIM38O00635 SUB1P2-201ENST00000556401 297 ntBASIC3.73□□□□□ -1.81
TRIM38O00635 TRAV28-201ENST00000557548 323 ntBASIC3.73□□□□□ -1.81
TRIM38O00635 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.73□□□□□ -1.81
TRIM38O00635 AC098848.2-201ENST00000588023 330 ntBASIC3.73□□□□□ -1.81
TRIM38O00635 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC3.73□□□□□ -1.81
TRIM38O00635 AC006006.1-201ENST00000603082 144 ntBASIC3.73□□□□□ -1.81
TRIM38O00635 SNRPGP17-201ENST00000603780 214 ntBASIC3.73□□□□□ -1.81
TRIM38O00635 U3.45-201ENST00000607547 219 ntBASIC3.73□□□□□ -1.81
TRIM38O00635 AC090425.1-201ENST00000610007 140 ntBASIC3.73□□□□□ -1.81
TRIM38O00635 uc_338.5-201ENST00000611839 155 ntBASIC3.73□□□□□ -1.81
TRIM38O00635 AC034102.8-201ENST00000615146 484 ntBASIC3.73□□□□□ -1.81
TRIM38O00635 AC009248.2-201ENST00000619826 254 ntBASIC3.73□□□□□ -1.81
TRIM38O00635 AC090971.5-201ENST00000621102 293 ntBASIC3.73□□□□□ -1.81
TRIM38O00635 7SK.10-201ENST00000621414 298 ntBASIC3.73□□□□□ -1.81
TRIM38O00635 AC007785.2-201ENST00000598627 1916 ntBASIC3.73□□□□□ -1.81
TRIM38O00635 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
TRIM38O00635 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
TRIM38O00635 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
TRIM38O00635 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
TRIM38O00635 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.72□□□□□ -1.81
TRIM38O00635 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
TRIM38O00635 AC007823.1-201ENST00000569932 1566 ntBASIC3.72□□□□□ -1.81
TRIM38O00635 CKAP2P1-201ENST00000555477 2049 ntBASIC3.72□□□□□ -1.81
TRIM38O00635 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.72□□□□□ -1.81
TRIM38O00635 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
TRIM38O00635 MTCO1P12-201ENST00000414273 1543 ntBASIC3.72□□□□□ -1.81
TRIM38O00635 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
TRIM38O00635 Y_RNA.128-201ENST00000363391 112 ntBASIC3.72□□□□□ -1.81
TRIM38O00635 RNA5SP51-201ENST00000364750 119 ntBASIC3.72□□□□□ -1.81
TRIM38O00635 SNORA33.2-201ENST00000365413 134 ntBASIC3.72□□□□□ -1.81
TRIM38O00635 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
TRIM38O00635 RNU6-701P-201ENST00000384059 107 ntBASIC3.72□□□□□ -1.81
TRIM38O00635 RNU6-74P-201ENST00000384235 107 ntBASIC3.72□□□□□ -1.81
TRIM38O00635 Y_RNA.459-201ENST00000384251 102 ntBASIC3.72□□□□□ -1.81
TRIM38O00635 SNORA1.3-201ENST00000384676 136 ntBASIC3.72□□□□□ -1.81
TRIM38O00635 Y_RNA.579-201ENST00000390939 94 ntBASIC3.72□□□□□ -1.81
TRIM38O00635 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
TRIM38O00635 AL391417.1-201ENST00000404100 426 ntBASIC3.72□□□□□ -1.81
TRIM38O00635 AL162578.1-201ENST00000406202 378 ntBASIC3.72□□□□□ -1.81
TRIM38O00635 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.72□□□□□ -1.81
TRIM38O00635 NCOR1P3-201ENST00000420479 303 ntBASIC3.72□□□□□ -1.81
TRIM38O00635 RPL35AP12-201ENST00000425362 338 ntBASIC3.72□□□□□ -1.81
TRIM38O00635 AC091390.3-201ENST00000426478 338 ntBASIC3.72□□□□□ -1.81
TRIM38O00635 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.72□□□□□ -1.81
TRIM38O00635 HMGB1P27-201ENST00000431429 603 ntBASIC3.72□□□□□ -1.81
TRIM38O00635 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC3.72□□□□□ -1.81
TRIM38O00635 SNRPEP4-201ENST00000435815 279 ntBASIC3.72□□□□□ -1.81
TRIM38O00635 NEFMP1-201ENST00000443423 1006 ntBASIC3.72□□□□□ -1.81
TRIM38O00635 RPS3AP12-201ENST00000443616 753 ntBASIC3.72□□□□□ -1.81
TRIM38O00635 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.72□□□□□ -1.81
TRIM38O00635 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.72□□□□□ -1.81
TRIM38O00635 SNORD19B-201ENST00000459623 84 ntBASIC3.72□□□□□ -1.81
TRIM38O00635 AC130509.1-201ENST00000464158 433 ntBASIC3.72□□□□□ -1.81
TRIM38O00635 AC083798.1-201ENST00000472671 131 ntBASIC3.72□□□□□ -1.81
TRIM38O00635 RN7SL293P-201ENST00000481765 281 ntBASIC3.72□□□□□ -1.81
TRIM38O00635 RPL7P47-201ENST00000497299 556 ntBASIC3.72□□□□□ -1.81
TRIM38O00635 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC3.72□□□□□ -1.81
TRIM38O00635 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.72□□□□□ -1.81
TRIM38O00635 SNORD27.1-201ENST00000516319 72 ntBASIC3.72□□□□□ -1.81
TRIM38O00635 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms