Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.2
SDCBPO00560 AC006026.1-201ENST00000444025 1803 ntBASIC1.33□□□□□ -2.2
SDCBPO00560 RNU6-1159P-201ENST00000362933 107 ntBASIC1.33□□□□□ -2.2
SDCBPO00560 RNU6-1078P-201ENST00000364522 103 ntBASIC1.33□□□□□ -2.2
SDCBPO00560 RNU6-609P-201ENST00000365459 107 ntBASIC1.33□□□□□ -2.2
SDCBPO00560 MIR504-201ENST00000385065 83 ntBASIC1.33□□□□□ -2.2
SDCBPO00560 AL603865.2-201ENST00000401679 213 ntBASIC1.33□□□□□ -2.2
SDCBPO00560 AL079342.2-201ENST00000403367 482 ntBASIC1.33□□□□□ -2.2
SDCBPO00560 AL512604.1-201ENST00000404812 257 ntBASIC1.33□□□□□ -2.2
SDCBPO00560 USP9YP19-201ENST00000412165 485 ntBASIC1.33□□□□□ -2.2
SDCBPO00560 USP9YP13-201ENST00000417797 480 ntBASIC1.33□□□□□ -2.2
SDCBPO00560 BX276092.3-201ENST00000424182 230 ntBASIC1.33□□□□□ -2.2
SDCBPO00560 MTCO1P3-201ENST00000429327 192 ntBASIC1.33□□□□□ -2.2
SDCBPO00560 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.33□□□□□ -2.2
SDCBPO00560 GTF2IP7-202ENST00000436677 309 ntBASIC1.33□□□□□ -2.2
SDCBPO00560 SNRPEP9-201ENST00000436794 238 ntBASIC1.33□□□□□ -2.2
SDCBPO00560 AC098831.1-201ENST00000440661 216 ntBASIC1.33□□□□□ -2.2
SDCBPO00560 MTND2P20-201ENST00000440805 661 ntBASIC1.33□□□□□ -2.2
SDCBPO00560 MOB1AP2-201ENST00000446060 614 ntBASIC1.33□□□□□ -2.2
SDCBPO00560 HMGB1P28-201ENST00000507778 552 ntBASIC1.33□□□□□ -2.2
SDCBPO00560 AC116337.1-201ENST00000509680 687 ntBASIC1.33□□□□□ -2.2
SDCBPO00560 AC027338.1-201ENST00000514840 825 ntBASIC1.33□□□□□ -2.2
SDCBPO00560 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC1.33□□□□□ -2.2
SDCBPO00560 SLC2A13P1-201ENST00000531560 322 ntBASIC1.33□□□□□ -2.2
SDCBPO00560 AP000873.5-201ENST00000533906 236 ntBASIC1.33□□□□□ -2.2
SDCBPO00560 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.33□□□□□ -2.2
SDCBPO00560 MIR4299-201ENST00000577899 72 ntBASIC1.33□□□□□ -2.2
SDCBPO00560 AC105245.1-201ENST00000581934 244 ntBASIC1.33□□□□□ -2.2
SDCBPO00560 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC1.33□□□□□ -2.2
SDCBPO00560 AC002545.1-201ENST00000592511 181 ntBASIC1.33□□□□□ -2.2
SDCBPO00560 AL357094.1-201ENST00000603845 844 ntBASIC1.33□□□□□ -2.2
SDCBPO00560 uc_338.5-201ENST00000611839 155 ntBASIC1.33□□□□□ -2.2
SDCBPO00560 AC022202.1-201ENST00000613515 211 ntBASIC1.33□□□□□ -2.2
SDCBPO00560 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC1.33□□□□□ -2.2
SDCBPO00560 AL445264.1-201ENST00000621719 171 ntBASIC1.33□□□□□ -2.2
SDCBPO00560 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC1.33□□□□□ -2.2
SDCBPO00560 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC1.32□□□□□ -2.2
SDCBPO00560 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC1.32□□□□□ -2.2
SDCBPO00560 AL139397.2-201ENST00000404529 772 ntBASIC1.32□□□□□ -2.2
SDCBPO00560 U6atac.2-201ENST00000408644 118 ntBASIC1.32□□□□□ -2.2
SDCBPO00560 TPMTP3-201ENST00000411928 735 ntBASIC1.32□□□□□ -2.2
SDCBPO00560 EDDM3CP-201ENST00000415977 425 ntBASIC1.32□□□□□ -2.2
SDCBPO00560 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.32□□□□□ -2.2
SDCBPO00560 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC1.32□□□□□ -2.2
SDCBPO00560 AIMP1P2-201ENST00000425294 312 ntBASIC1.32□□□□□ -2.2
SDCBPO00560 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC1.32□□□□□ -2.2
SDCBPO00560 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.32□□□□□ -2.2
SDCBPO00560 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.32□□□□□ -2.2
SDCBPO00560 MTATP6P30-201ENST00000443540 664 ntBASIC1.32□□□□□ -2.2
SDCBPO00560 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.32□□□□□ -2.2
SDCBPO00560 CECR9-201ENST00000453421 199 ntBASIC1.32□□□□□ -2.2
SDCBPO00560 SSXP1-201ENST00000453640 473 ntBASIC1.32□□□□□ -2.2
SDCBPO00560 snoU13.8-201ENST00000458890 104 ntBASIC1.32□□□□□ -2.2
SDCBPO00560 snoU13.15-201ENST00000459407 104 ntBASIC1.32□□□□□ -2.2
SDCBPO00560 AC008481.1-201ENST00000463278 396 ntBASIC1.32□□□□□ -2.2
SDCBPO00560 AC114981.1-201ENST00000503897 678 ntBASIC1.32□□□□□ -2.2
SDCBPO00560 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC1.32□□□□□ -2.2
SDCBPO00560 FAM92A1P2-202ENST00000504766 877 ntBASIC1.32□□□□□ -2.2
SDCBPO00560 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
SDCBPO00560 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC1.32□□□□□ -2.2
SDCBPO00560 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC1.32□□□□□ -2.2
SDCBPO00560 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC1.32□□□□□ -2.2
SDCBPO00560 AC104072.1-201ENST00000568817 668 ntBASIC1.32□□□□□ -2.2
SDCBPO00560 MIR4529-201ENST00000578110 78 ntBASIC1.32□□□□□ -2.2
SDCBPO00560 MIR5708-201ENST00000579723 85 ntBASIC1.32□□□□□ -2.2
SDCBPO00560 UBE2L4-201ENST00000587688 464 ntBASIC1.32□□□□□ -2.2
SDCBPO00560 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC1.32□□□□□ -2.2
SDCBPO00560 AC005296.1-201ENST00000616145 209 ntBASIC1.32□□□□□ -2.2
SDCBPO00560 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC1.32□□□□□ -2.2
SDCBPO00560 WWP1P1-201ENST00000466609 2769 ntBASIC1.32□□□□□ -2.2
SDCBPO00560 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.32□□□□□ -2.2
SDCBPO00560 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.31□□□□□ -2.2
SDCBPO00560 UBE2L2-201ENST00000254302 429 ntBASIC1.31□□□□□ -2.2
SDCBPO00560 RNU6-1207P-201ENST00000384343 107 ntBASIC1.31□□□□□ -2.2
SDCBPO00560 RNU6-114P-201ENST00000384704 105 ntBASIC1.31□□□□□ -2.2
SDCBPO00560 RNU6-997P-201ENST00000384725 107 ntBASIC1.31□□□□□ -2.2
SDCBPO00560 SNORA26.9-201ENST00000391322 122 ntBASIC1.31□□□□□ -2.2
SDCBPO00560 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC1.31□□□□□ -2.2
SDCBPO00560 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.31□□□□□ -2.2
SDCBPO00560 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC1.31□□□□□ -2.2
SDCBPO00560 MTND1P28-201ENST00000435623 950 ntBASIC1.31□□□□□ -2.2
SDCBPO00560 FABP5P14-201ENST00000437273 393 ntBASIC1.31□□□□□ -2.2
SDCBPO00560 AL353689.1-201ENST00000438895 199 ntBASIC1.31□□□□□ -2.2
SDCBPO00560 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC1.31□□□□□ -2.2
SDCBPO00560 snoU13.26-201ENST00000459452 105 ntBASIC1.31□□□□□ -2.2
SDCBPO00560 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC1.31□□□□□ -2.2
SDCBPO00560 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC1.31□□□□□ -2.2
SDCBPO00560 AC055855.1-201ENST00000489563 579 ntBASIC1.31□□□□□ -2.2
SDCBPO00560 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.31□□□□□ -2.2
SDCBPO00560 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC1.31□□□□□ -2.2
SDCBPO00560 AC008526.1-201ENST00000509149 338 ntBASIC1.31□□□□□ -2.2
SDCBPO00560 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC1.31□□□□□ -2.2
SDCBPO00560 CYB5AP5-201ENST00000549779 389 ntBASIC1.31□□□□□ -2.2
SDCBPO00560 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
SDCBPO00560 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC1.31□□□□□ -2.2
SDCBPO00560 MIR3945-201ENST00000581853 98 ntBASIC1.31□□□□□ -2.2
SDCBPO00560 MIR4765-201ENST00000585007 77 ntBASIC1.31□□□□□ -2.2
SDCBPO00560 AC091152.3-201ENST00000604227 325 ntBASIC1.31□□□□□ -2.2
SDCBPO00560 BX248123.2-201ENST00000606318 124 ntBASIC1.31□□□□□ -2.2
SDCBPO00560 AL121652.1-201ENST00000608851 448 ntBASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms