Protein–RNA interactions for Protein: A6NCW0

USP17L3, Ubiquitin carboxyl-terminal hydrolase 17-like protein 3, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L3A6NCW0 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
USP17L3A6NCW0 RPS24P6-201ENST00000452670 400 ntBASIC5.31□□□□□ -1.56
USP17L3A6NCW0 CEACAMP4-201ENST00000457676 421 ntBASIC5.31□□□□□ -1.56
USP17L3A6NCW0 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC5.31□□□□□ -1.56
USP17L3A6NCW0 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC5.31□□□□□ -1.56
USP17L3A6NCW0 AK3P2-201ENST00000507976 429 ntBASIC5.31□□□□□ -1.56
USP17L3A6NCW0 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC5.31□□□□□ -1.56
USP17L3A6NCW0 MIR4429-201ENST00000580105 73 ntBASIC5.31□□□□□ -1.56
USP17L3A6NCW0 AC096772.1-201ENST00000609146 564 ntBASIC5.31□□□□□ -1.56
USP17L3A6NCW0 MIR6867-201ENST00000610636 67 ntBASIC5.31□□□□□ -1.56
USP17L3A6NCW0 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
USP17L3A6NCW0 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.31□□□□□ -1.56
USP17L3A6NCW0 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
USP17L3A6NCW0 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
USP17L3A6NCW0 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
USP17L3A6NCW0 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
USP17L3A6NCW0 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC5.3□□□□□ -1.56
USP17L3A6NCW0 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.3□□□□□ -1.56
USP17L3A6NCW0 Z73965.1-201ENST00000623412 2297 ntBASIC5.3□□□□□ -1.56
USP17L3A6NCW0 DDX18P3-201ENST00000404856 2007 ntBASIC5.3□□□□□ -1.56
USP17L3A6NCW0 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
USP17L3A6NCW0 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
USP17L3A6NCW0 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
USP17L3A6NCW0 Y_RNA.26-201ENST00000362539 101 ntBASIC5.3□□□□□ -1.56
USP17L3A6NCW0 RNU1-76P-201ENST00000362903 159 ntBASIC5.3□□□□□ -1.56
USP17L3A6NCW0 RNU6-806P-201ENST00000365147 105 ntBASIC5.3□□□□□ -1.56
USP17L3A6NCW0 RNU6-741P-201ENST00000383889 107 ntBASIC5.3□□□□□ -1.56
USP17L3A6NCW0 Y_RNA.562-201ENST00000384695 113 ntBASIC5.3□□□□□ -1.56
USP17L3A6NCW0 MORN2-203ENST00000409131 544 ntTSL 5 BASIC5.3□□□□□ -1.56
USP17L3A6NCW0 Y_RNA.592-201ENST00000410274 109 ntBASIC5.3□□□□□ -1.56
USP17L3A6NCW0 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC5.3□□□□□ -1.56
USP17L3A6NCW0 RPL27AP8-201ENST00000424277 446 ntBASIC5.3□□□□□ -1.56
USP17L3A6NCW0 AC007919.1-201ENST00000429380 217 ntBASIC5.3□□□□□ -1.56
USP17L3A6NCW0 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC5.3□□□□□ -1.56
USP17L3A6NCW0 SNORD108-201ENST00000459332 71 ntBASIC5.3□□□□□ -1.56
USP17L3A6NCW0 RN7SL812P-201ENST00000493791 279 ntBASIC5.3□□□□□ -1.56
USP17L3A6NCW0 AC104164.2-201ENST00000496953 495 ntBASIC5.3□□□□□ -1.56
USP17L3A6NCW0 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC5.3□□□□□ -1.56
USP17L3A6NCW0 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC5.3□□□□□ -1.56
USP17L3A6NCW0 AC025755.1-201ENST00000521306 278 ntBASIC5.3□□□□□ -1.56
USP17L3A6NCW0 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC5.3□□□□□ -1.56
USP17L3A6NCW0 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC5.3□□□□□ -1.56
USP17L3A6NCW0 AC103996.1-201ENST00000555468 102 ntBASIC5.3□□□□□ -1.56
USP17L3A6NCW0 AC009318.2-201ENST00000610917 651 ntBASIC5.3□□□□□ -1.56
USP17L3A6NCW0 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
USP17L3A6NCW0 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC5.3□□□□□ -1.56
USP17L3A6NCW0 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
USP17L3A6NCW0 GHR-202ENST00000357703 4316 ntTSL 5 BASIC5.3□□□□□ -1.56
USP17L3A6NCW0 GHR-213ENST00000622294 4312 ntTSL 5 BASIC5.3□□□□□ -1.56
USP17L3A6NCW0 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
USP17L3A6NCW0 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
USP17L3A6NCW0 RNU6-209P-201ENST00000384118 107 ntBASIC5.29□□□□□ -1.56
USP17L3A6NCW0 RNU2-64P-201ENST00000411315 191 ntBASIC5.29□□□□□ -1.56
USP17L3A6NCW0 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC5.29□□□□□ -1.56
USP17L3A6NCW0 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC5.29□□□□□ -1.56
USP17L3A6NCW0 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC5.29□□□□□ -1.56
USP17L3A6NCW0 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC5.29□□□□□ -1.56
USP17L3A6NCW0 RNU6-612P-201ENST00000516909 102 ntBASIC5.29□□□□□ -1.56
USP17L3A6NCW0 AP003733.2-201ENST00000529409 171 ntBASIC5.29□□□□□ -1.56
USP17L3A6NCW0 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC5.29□□□□□ -1.56
USP17L3A6NCW0 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC5.29□□□□□ -1.56
USP17L3A6NCW0 HMGB1P14-201ENST00000557424 591 ntBASIC5.29□□□□□ -1.56
USP17L3A6NCW0 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
USP17L3A6NCW0 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC5.29□□□□□ -1.56
USP17L3A6NCW0 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.29□□□□□ -1.56
USP17L3A6NCW0 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.29□□□□□ -1.56
USP17L3A6NCW0 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
USP17L3A6NCW0 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC5.29□□□□□ -1.56
USP17L3A6NCW0 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
USP17L3A6NCW0 AC104260.2-201ENST00000623551 3497 ntBASIC5.29□□□□□ -1.56
USP17L3A6NCW0 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
USP17L3A6NCW0 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
USP17L3A6NCW0 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
USP17L3A6NCW0 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
USP17L3A6NCW0 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
USP17L3A6NCW0 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
USP17L3A6NCW0 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
USP17L3A6NCW0 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
USP17L3A6NCW0 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
USP17L3A6NCW0 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC5.28□□□□□ -1.56
USP17L3A6NCW0 RNU6-611P-201ENST00000384276 104 ntBASIC5.28□□□□□ -1.56
USP17L3A6NCW0 Y_RNA.478-201ENST00000384358 107 ntBASIC5.28□□□□□ -1.56
USP17L3A6NCW0 Y_RNA.518-201ENST00000384552 113 ntBASIC5.28□□□□□ -1.56
USP17L3A6NCW0 MTCYBP2-201ENST00000407745 171 ntBASIC5.28□□□□□ -1.56
USP17L3A6NCW0 MIR548I3-201ENST00000408378 149 ntBASIC5.28□□□□□ -1.56
USP17L3A6NCW0 MIR548I1-201ENST00000408810 149 ntBASIC5.28□□□□□ -1.56
USP17L3A6NCW0 CTSL3P-202ENST00000412179 788 ntBASIC5.28□□□□□ -1.56
USP17L3A6NCW0 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
USP17L3A6NCW0 TRBVB-201ENST00000477100 408 ntBASIC5.28□□□□□ -1.56
USP17L3A6NCW0 HMGB1P22-201ENST00000505315 124 ntBASIC5.28□□□□□ -1.56
USP17L3A6NCW0 RNU6-570P-201ENST00000517051 105 ntBASIC5.28□□□□□ -1.56
USP17L3A6NCW0 SNORA31.19-201ENST00000517079 126 ntBASIC5.28□□□□□ -1.56
USP17L3A6NCW0 AC004024.1-201ENST00000549244 247 ntBASIC5.28□□□□□ -1.56
USP17L3A6NCW0 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC5.28□□□□□ -1.56
USP17L3A6NCW0 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC5.28□□□□□ -1.56
USP17L3A6NCW0 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC5.28□□□□□ -1.56
USP17L3A6NCW0 AC243829.7-201ENST00000633081 225 ntBASIC5.28□□□□□ -1.56
USP17L3A6NCW0 AL359693.1-201ENST00000614959 2407 ntBASIC5.28□□□□□ -1.56
USP17L3A6NCW0 AL031595.2-201ENST00000624215 19071 ntBASIC5.28□□□□□ -1.56
USP17L3A6NCW0 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 158.3 ms