Protein–RNA interactions for Protein: U3KQE9

Uncharacterized protein (Fragment), humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U3KQE9 SNORA66-201ENST00000384792 133 ntBASIC4□□□□□ -1.77
U3KQE9 RNU6-159P-201ENST00000391080 106 ntBASIC4□□□□□ -1.77
U3KQE9 RNA5SP31-201ENST00000411144 127 ntBASIC4□□□□□ -1.77
U3KQE9 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC4□□□□□ -1.77
U3KQE9 TBCAP2-201ENST00000416175 326 ntBASIC4□□□□□ -1.77
U3KQE9 RPL23AP95-201ENST00000426806 265 ntBASIC4□□□□□ -1.77
U3KQE9 AC007919.1-201ENST00000429380 217 ntBASIC4□□□□□ -1.77
U3KQE9 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC4□□□□□ -1.77
U3KQE9 AC005042.3-201ENST00000453230 174 ntBASIC4□□□□□ -1.77
U3KQE9 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC4□□□□□ -1.77
U3KQE9 AL671862.1-201ENST00000515851 349 ntBASIC4□□□□□ -1.77
U3KQE9 RN7SKP276-201ENST00000516242 268 ntBASIC4□□□□□ -1.77
U3KQE9 SNORA31.20-201ENST00000517111 133 ntBASIC4□□□□□ -1.77
U3KQE9 RN7SKP147-201ENST00000517154 244 ntBASIC4□□□□□ -1.77
U3KQE9 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC4□□□□□ -1.77
U3KQE9 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC4□□□□□ -1.77
U3KQE9 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4□□□□□ -1.77
U3KQE9 MED28P6-201ENST00000558776 231 ntBASIC4□□□□□ -1.77
U3KQE9 RPL10P14-201ENST00000565265 298 ntBASIC4□□□□□ -1.77
U3KQE9 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC4□□□□□ -1.77
U3KQE9 GMFG-202ENST00000594700 397 ntTSL 2 BASIC4□□□□□ -1.77
U3KQE9 AL133393.1-201ENST00000603277 287 ntBASIC4□□□□□ -1.77
U3KQE9 MIR6861-201ENST00000618657 64 ntBASIC4□□□□□ -1.77
U3KQE9 AC118658.2-201ENST00000618697 459 ntBASIC4□□□□□ -1.77
U3KQE9 AC024581.2-201ENST00000619986 252 ntBASIC4□□□□□ -1.77
U3KQE9 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC4□□□□□ -1.77
U3KQE9 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4□□□□□ -1.77
U3KQE9 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4□□□□□ -1.77
U3KQE9 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4□□□□□ -1.77
U3KQE9 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
U3KQE9 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC4□□□□□ -1.77
U3KQE9 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
U3KQE9 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
U3KQE9 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
U3KQE9 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
U3KQE9 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC3.99□□□□□ -1.77
U3KQE9 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
U3KQE9 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
U3KQE9 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
U3KQE9 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
U3KQE9 RNA5SP183-201ENST00000362452 119 ntBASIC3.99□□□□□ -1.77
U3KQE9 U3.3-201ENST00000362986 216 ntBASIC3.99□□□□□ -1.77
U3KQE9 RNU5B-2P-201ENST00000363036 113 ntBASIC3.99□□□□□ -1.77
U3KQE9 RNU6-312P-201ENST00000364629 107 ntBASIC3.99□□□□□ -1.77
U3KQE9 RNA5SP90-201ENST00000364801 99 ntBASIC3.99□□□□□ -1.77
U3KQE9 Y_RNA.331-201ENST00000365267 102 ntBASIC3.99□□□□□ -1.77
U3KQE9 SNORD116-18-201ENST00000383961 92 ntBASIC3.99□□□□□ -1.77
U3KQE9 RNU6-213P-201ENST00000384051 104 ntBASIC3.99□□□□□ -1.77
U3KQE9 Y_RNA.488-201ENST00000384403 102 ntBASIC3.99□□□□□ -1.77
U3KQE9 Y_RNA.568-201ENST00000384742 113 ntBASIC3.99□□□□□ -1.77
U3KQE9 MIR329-1-201ENST00000385028 80 ntBASIC3.99□□□□□ -1.77
U3KQE9 SNORA17A-201ENST00000391185 133 ntBASIC3.99□□□□□ -1.77
U3KQE9 AC244098.2-201ENST00000422068 99 ntBASIC3.99□□□□□ -1.77
U3KQE9 DDX39BP1-205ENST00000422507 192 ntBASIC3.99□□□□□ -1.77
U3KQE9 HMGN2P27-201ENST00000427352 270 ntBASIC3.99□□□□□ -1.77
U3KQE9 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC3.99□□□□□ -1.77
U3KQE9 AL162725.1-201ENST00000435405 301 ntBASIC3.99□□□□□ -1.77
U3KQE9 SNRPEP9-201ENST00000436794 238 ntBASIC3.99□□□□□ -1.77
U3KQE9 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.99□□□□□ -1.77
U3KQE9 SSXP4-201ENST00000451349 245 ntBASIC3.99□□□□□ -1.77
U3KQE9 RN7SL547P-201ENST00000490793 290 ntBASIC3.99□□□□□ -1.77
U3KQE9 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC3.99□□□□□ -1.77
U3KQE9 AC005176.2-201ENST00000596933 147 ntBASIC3.99□□□□□ -1.77
U3KQE9 AC091895.1-201ENST00000624494 256 ntBASIC3.99□□□□□ -1.77
U3KQE9 SNORA17.5-201ENST00000630429 132 ntBASIC3.99□□□□□ -1.77
U3KQE9 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC3.99□□□□□ -1.77
U3KQE9 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
U3KQE9 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC3.99□□□□□ -1.77
U3KQE9 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC3.99□□□□□ -1.77
U3KQE9 ADAM5-202ENST00000399789 1942 ntBASIC3.99□□□□□ -1.77
U3KQE9 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC3.99□□□□□ -1.77
U3KQE9 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
U3KQE9 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
U3KQE9 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
U3KQE9 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
U3KQE9 GHR-202ENST00000357703 4316 ntTSL 5 BASIC3.98□□□□□ -1.77
U3KQE9 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC3.98□□□□□ -1.77
U3KQE9 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
U3KQE9 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
U3KQE9 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
U3KQE9 RNU6-335P-201ENST00000364563 113 ntBASIC3.98□□□□□ -1.77
U3KQE9 RNA5SP132-201ENST00000364725 118 ntBASIC3.98□□□□□ -1.77
U3KQE9 RNA5SP223-201ENST00000365174 120 ntBASIC3.98□□□□□ -1.77
U3KQE9 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.98□□□□□ -1.77
U3KQE9 SNORA29-201ENST00000384183 140 ntBASIC3.98□□□□□ -1.77
U3KQE9 U8.10-201ENST00000384260 133 ntBASIC3.98□□□□□ -1.77
U3KQE9 MIR105-1-201ENST00000385222 81 ntBASIC3.98□□□□□ -1.77
U3KQE9 MIR143-201ENST00000385300 106 ntBASIC3.98□□□□□ -1.77
U3KQE9 RNU1-77P-201ENST00000390868 162 ntBASIC3.98□□□□□ -1.77
U3KQE9 AC009804.1-201ENST00000400949 179 ntBASIC3.98□□□□□ -1.77
U3KQE9 AL357139.1-201ENST00000407792 426 ntBASIC3.98□□□□□ -1.77
U3KQE9 RNU6ATAC18P-201ENST00000408413 101 ntBASIC3.98□□□□□ -1.77
U3KQE9 OR2AM1P-201ENST00000422137 422 ntBASIC3.98□□□□□ -1.77
U3KQE9 Z82210.1-201ENST00000440037 231 ntBASIC3.98□□□□□ -1.77
U3KQE9 NUTF2P7-201ENST00000453086 375 ntBASIC3.98□□□□□ -1.77
U3KQE9 snoU109.2-201ENST00000459316 135 ntBASIC3.98□□□□□ -1.77
U3KQE9 KC877373.1-201ENST00000479066 408 ntBASIC3.98□□□□□ -1.77
U3KQE9 AC107016.1-201ENST00000550463 337 ntBASIC3.98□□□□□ -1.77
U3KQE9 AC006349.1-201ENST00000555526 235 ntBASIC3.98□□□□□ -1.77
U3KQE9 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 119.7 ms