Protein–RNA interactions for Protein: Q9Y6N9

USH1C, Harmonin, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1CQ9Y6N9 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC1.86□□□□□ -2.11
USH1CQ9Y6N9 MTND1P31-201ENST00000449206 961 ntBASIC1.86□□□□□ -2.11
USH1CQ9Y6N9 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC1.86□□□□□ -2.11
USH1CQ9Y6N9 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC1.86□□□□□ -2.11
USH1CQ9Y6N9 CECR9-201ENST00000453421 199 ntBASIC1.86□□□□□ -2.11
USH1CQ9Y6N9 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC1.86□□□□□ -2.11
USH1CQ9Y6N9 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC1.86□□□□□ -2.11
USH1CQ9Y6N9 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC1.86□□□□□ -2.11
USH1CQ9Y6N9 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC1.86□□□□□ -2.11
USH1CQ9Y6N9 RNY4P37-201ENST00000516225 96 ntBASIC1.86□□□□□ -2.11
USH1CQ9Y6N9 RNU6-1028P-201ENST00000517164 93 ntBASIC1.86□□□□□ -2.11
USH1CQ9Y6N9 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.86□□□□□ -2.11
USH1CQ9Y6N9 MTCO2P15-201ENST00000532655 656 ntBASIC1.86□□□□□ -2.11
USH1CQ9Y6N9 AP000873.5-201ENST00000533906 236 ntBASIC1.86□□□□□ -2.11
USH1CQ9Y6N9 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.86□□□□□ -2.11
USH1CQ9Y6N9 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.86□□□□□ -2.11
USH1CQ9Y6N9 AC126365.2-201ENST00000580630 379 ntBASIC1.86□□□□□ -2.11
USH1CQ9Y6N9 MIR4765-201ENST00000585007 77 ntBASIC1.86□□□□□ -2.11
USH1CQ9Y6N9 AC005261.5-201ENST00000596280 355 ntBASIC1.86□□□□□ -2.11
USH1CQ9Y6N9 AC103710.1-201ENST00000610003 901 ntBASIC1.86□□□□□ -2.11
USH1CQ9Y6N9 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
USH1CQ9Y6N9 YWHAEP7-203ENST00000622054 312 ntBASIC1.86□□□□□ -2.11
USH1CQ9Y6N9 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC1.86□□□□□ -2.11
USH1CQ9Y6N9 AL359757.2-201ENST00000624309 274 ntBASIC1.86□□□□□ -2.11
USH1CQ9Y6N9 PISRT1-201ENST00000626175 531 ntBASIC1.86□□□□□ -2.11
USH1CQ9Y6N9 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC1.86□□□□□ -2.11
USH1CQ9Y6N9 MTND5P30-201ENST00000452896 1731 ntBASIC1.86□□□□□ -2.11
USH1CQ9Y6N9 RNU6-778P-201ENST00000363269 103 ntBASIC1.85□□□□□ -2.11
USH1CQ9Y6N9 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
USH1CQ9Y6N9 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC1.85□□□□□ -2.11
USH1CQ9Y6N9 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC1.85□□□□□ -2.11
USH1CQ9Y6N9 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC1.85□□□□□ -2.11
USH1CQ9Y6N9 BX276092.3-201ENST00000424182 230 ntBASIC1.85□□□□□ -2.11
USH1CQ9Y6N9 AC013262.1-201ENST00000426710 252 ntBASIC1.85□□□□□ -2.11
USH1CQ9Y6N9 ELOCP14-201ENST00000428070 331 ntBASIC1.85□□□□□ -2.11
USH1CQ9Y6N9 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
USH1CQ9Y6N9 RPL35AP22-201ENST00000436855 335 ntBASIC1.85□□□□□ -2.11
USH1CQ9Y6N9 HMGB3P12-201ENST00000438745 556 ntBASIC1.85□□□□□ -2.11
USH1CQ9Y6N9 ELOCP7-201ENST00000439968 331 ntBASIC1.85□□□□□ -2.11
USH1CQ9Y6N9 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.85□□□□□ -2.11
USH1CQ9Y6N9 TPT1P14-201ENST00000448018 505 ntBASIC1.85□□□□□ -2.11
USH1CQ9Y6N9 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC1.85□□□□□ -2.11
USH1CQ9Y6N9 AC080013.2-201ENST00000460866 323 ntBASIC1.85□□□□□ -2.11
USH1CQ9Y6N9 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
USH1CQ9Y6N9 AC069528.1-202ENST00000482888 637 ntBASIC1.85□□□□□ -2.11
USH1CQ9Y6N9 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC1.85□□□□□ -2.11
USH1CQ9Y6N9 RNU6-150P-201ENST00000516237 95 ntBASIC1.85□□□□□ -2.11
USH1CQ9Y6N9 RNU6-390P-201ENST00000516259 103 ntBASIC1.85□□□□□ -2.11
USH1CQ9Y6N9 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC1.85□□□□□ -2.11
USH1CQ9Y6N9 CA1-215ENST00000522389 551 ntTSL 3 BASIC1.85□□□□□ -2.11
USH1CQ9Y6N9 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC1.85□□□□□ -2.11
USH1CQ9Y6N9 AL133241.1-201ENST00000556832 487 ntBASIC1.85□□□□□ -2.11
USH1CQ9Y6N9 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC1.85□□□□□ -2.11
USH1CQ9Y6N9 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC1.85□□□□□ -2.11
USH1CQ9Y6N9 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC1.85□□□□□ -2.11
USH1CQ9Y6N9 AC105245.1-201ENST00000581934 244 ntBASIC1.85□□□□□ -2.11
USH1CQ9Y6N9 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC1.85□□□□□ -2.11
USH1CQ9Y6N9 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC1.85□□□□□ -2.11
USH1CQ9Y6N9 AC007229.1-201ENST00000590455 412 ntBASIC1.85□□□□□ -2.11
USH1CQ9Y6N9 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.85□□□□□ -2.11
USH1CQ9Y6N9 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC1.85□□□□□ -2.11
USH1CQ9Y6N9 AL109918.3-201ENST00000603072 338 ntBASIC1.85□□□□□ -2.11
USH1CQ9Y6N9 RPP40P2-201ENST00000603596 712 ntBASIC1.85□□□□□ -2.11
USH1CQ9Y6N9 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC1.85□□□□□ -2.11
USH1CQ9Y6N9 AC107075.1-201ENST00000613695 314 ntBASIC1.85□□□□□ -2.11
USH1CQ9Y6N9 AC007490.1-201ENST00000624321 703 ntBASIC1.85□□□□□ -2.11
USH1CQ9Y6N9 AP003485.1-201ENST00000625093 753 ntBASIC1.85□□□□□ -2.11
USH1CQ9Y6N9 U2.21-201ENST00000637295 81 ntBASIC1.85□□□□□ -2.11
USH1CQ9Y6N9 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
USH1CQ9Y6N9 AC103710.2-202ENST00000641454 2853 ntBASIC1.85□□□□□ -2.11
USH1CQ9Y6N9 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.84□□□□□ -2.11
USH1CQ9Y6N9 ADAM3A-203ENST00000461344 2157 ntBASIC1.84□□□□□ -2.11
USH1CQ9Y6N9 MIR504-201ENST00000385065 83 ntBASIC1.84□□□□□ -2.11
USH1CQ9Y6N9 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC1.84□□□□□ -2.11
USH1CQ9Y6N9 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.84□□□□□ -2.11
USH1CQ9Y6N9 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC1.84□□□□□ -2.11
USH1CQ9Y6N9 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.84□□□□□ -2.11
USH1CQ9Y6N9 AC093106.2-201ENST00000428212 385 ntBASIC1.84□□□□□ -2.11
USH1CQ9Y6N9 Z98742.2-201ENST00000431564 187 ntBASIC1.84□□□□□ -2.11
USH1CQ9Y6N9 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC1.84□□□□□ -2.11
USH1CQ9Y6N9 MTND1P28-201ENST00000435623 950 ntBASIC1.84□□□□□ -2.11
USH1CQ9Y6N9 FABP5P14-201ENST00000437273 393 ntBASIC1.84□□□□□ -2.11
USH1CQ9Y6N9 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.84□□□□□ -2.11
USH1CQ9Y6N9 snoU13.15-201ENST00000459407 104 ntBASIC1.84□□□□□ -2.11
USH1CQ9Y6N9 AC008481.1-201ENST00000463278 396 ntBASIC1.84□□□□□ -2.11
USH1CQ9Y6N9 RPS15AP36-201ENST00000492022 382 ntBASIC1.84□□□□□ -2.11
USH1CQ9Y6N9 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.84□□□□□ -2.11
USH1CQ9Y6N9 CBX3P7-201ENST00000532876 502 ntBASIC1.84□□□□□ -2.11
USH1CQ9Y6N9 MIR3167-201ENST00000579623 85 ntBASIC1.84□□□□□ -2.11
USH1CQ9Y6N9 AC008507.2-201ENST00000588402 1176 ntBASIC1.84□□□□□ -2.11
USH1CQ9Y6N9 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC1.84□□□□□ -2.11
USH1CQ9Y6N9 AC004987.4-201ENST00000603383 338 ntBASIC1.84□□□□□ -2.11
USH1CQ9Y6N9 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC1.84□□□□□ -2.11
USH1CQ9Y6N9 AC009237.15-201ENST00000610252 501 ntBASIC1.84□□□□□ -2.11
USH1CQ9Y6N9 AC018926.1-201ENST00000616335 435 ntBASIC1.84□□□□□ -2.11
USH1CQ9Y6N9 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC1.84□□□□□ -2.11
USH1CQ9Y6N9 AP006437.1-201ENST00000641440 3685 ntBASIC1.84□□□□□ -2.12
USH1CQ9Y6N9 MTND5P29-201ENST00000458676 1807 ntBASIC1.83□□□□□ -2.12
USH1CQ9Y6N9 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
USH1CQ9Y6N9 SNORA63.3-201ENST00000362682 132 ntBASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms