Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 RNA5SP44-201ENST00000410446 133 ntBASIC4.94□□□□□ -1.62
PCDHGA11Q9Y5H2 EIF1P2-201ENST00000428233 350 ntBASIC4.94□□□□□ -1.62
PCDHGA11Q9Y5H2 AC011742.1-201ENST00000431448 434 ntBASIC4.94□□□□□ -1.62
PCDHGA11Q9Y5H2 MTCO1P5-201ENST00000433573 344 ntBASIC4.94□□□□□ -1.62
PCDHGA11Q9Y5H2 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.94□□□□□ -1.62
PCDHGA11Q9Y5H2 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC4.94□□□□□ -1.62
PCDHGA11Q9Y5H2 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.94□□□□□ -1.62
PCDHGA11Q9Y5H2 RN7SL443P-201ENST00000464331 290 ntBASIC4.94□□□□□ -1.62
PCDHGA11Q9Y5H2 RPL30P1-201ENST00000488676 339 ntBASIC4.94□□□□□ -1.62
PCDHGA11Q9Y5H2 RNU6-1114P-201ENST00000516022 107 ntBASIC4.94□□□□□ -1.62
PCDHGA11Q9Y5H2 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.94□□□□□ -1.62
PCDHGA11Q9Y5H2 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC4.94□□□□□ -1.62
PCDHGA11Q9Y5H2 AL162424.1-201ENST00000602325 221 ntBASIC4.94□□□□□ -1.62
PCDHGA11Q9Y5H2 BRDTP1-201ENST00000605735 677 ntBASIC4.94□□□□□ -1.62
PCDHGA11Q9Y5H2 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC4.94□□□□□ -1.62
PCDHGA11Q9Y5H2 MIR4302-201ENST00000638058 60 ntBASIC4.94□□□□□ -1.62
PCDHGA11Q9Y5H2 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.94□□□□□ -1.62
PCDHGA11Q9Y5H2 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
PCDHGA11Q9Y5H2 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
PCDHGA11Q9Y5H2 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.94□□□□□ -1.62
PCDHGA11Q9Y5H2 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC4.94□□□□□ -1.62
PCDHGA11Q9Y5H2 AP001273.1-201ENST00000624493 3152 ntBASIC4.94□□□□□ -1.62
PCDHGA11Q9Y5H2 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.94□□□□□ -1.62
PCDHGA11Q9Y5H2 AC063976.2-201ENST00000425667 3556 ntBASIC4.93□□□□□ -1.62
PCDHGA11Q9Y5H2 HAUS6P2-201ENST00000433254 2404 ntBASIC4.93□□□□□ -1.62
PCDHGA11Q9Y5H2 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
PCDHGA11Q9Y5H2 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.93□□□□□ -1.62
PCDHGA11Q9Y5H2 U3.15-201ENST00000365398 212 ntBASIC4.93□□□□□ -1.62
PCDHGA11Q9Y5H2 RNU6-21P-201ENST00000384710 107 ntBASIC4.93□□□□□ -1.62
PCDHGA11Q9Y5H2 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
PCDHGA11Q9Y5H2 RNU1-139P-201ENST00000391307 165 ntBASIC4.93□□□□□ -1.62
PCDHGA11Q9Y5H2 RN7SKP206-201ENST00000410823 293 ntBASIC4.93□□□□□ -1.62
PCDHGA11Q9Y5H2 Y_RNA.626-201ENST00000411288 95 ntBASIC4.93□□□□□ -1.62
PCDHGA11Q9Y5H2 COX6CP10-201ENST00000416832 224 ntBASIC4.93□□□□□ -1.62
PCDHGA11Q9Y5H2 TOMM22P1-201ENST00000418578 312 ntBASIC4.93□□□□□ -1.62
PCDHGA11Q9Y5H2 AL355433.1-201ENST00000422804 300 ntBASIC4.93□□□□□ -1.62
PCDHGA11Q9Y5H2 AL139148.1-201ENST00000427122 680 ntBASIC4.93□□□□□ -1.62
PCDHGA11Q9Y5H2 AC005002.2-201ENST00000438228 269 ntBASIC4.93□□□□□ -1.62
PCDHGA11Q9Y5H2 CYCSP32-201ENST00000440548 321 ntBASIC4.93□□□□□ -1.62
PCDHGA11Q9Y5H2 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
PCDHGA11Q9Y5H2 RN7SL441P-201ENST00000492388 296 ntBASIC4.93□□□□□ -1.62
PCDHGA11Q9Y5H2 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC4.93□□□□□ -1.62
PCDHGA11Q9Y5H2 IMMP1LP3-201ENST00000604197 224 ntBASIC4.93□□□□□ -1.62
PCDHGA11Q9Y5H2 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.93□□□□□ -1.62
PCDHGA11Q9Y5H2 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
PCDHGA11Q9Y5H2 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
PCDHGA11Q9Y5H2 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
PCDHGA11Q9Y5H2 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.93□□□□□ -1.62
PCDHGA11Q9Y5H2 AC126323.6-202ENST00000568092 3511 ntBASIC4.93□□□□□ -1.62
PCDHGA11Q9Y5H2 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.93□□□□□ -1.62
PCDHGA11Q9Y5H2 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
PCDHGA11Q9Y5H2 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
PCDHGA11Q9Y5H2 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
PCDHGA11Q9Y5H2 RNU6-1020P-201ENST00000363684 107 ntBASIC4.92□□□□□ -1.62
PCDHGA11Q9Y5H2 RNU1-43P-201ENST00000365052 165 ntBASIC4.92□□□□□ -1.62
PCDHGA11Q9Y5H2 SNORA2.3-201ENST00000383920 135 ntBASIC4.92□□□□□ -1.62
PCDHGA11Q9Y5H2 Y_RNA.569-201ENST00000384749 103 ntBASIC4.92□□□□□ -1.62
PCDHGA11Q9Y5H2 MIR1286-201ENST00000408112 78 ntBASIC4.92□□□□□ -1.62
PCDHGA11Q9Y5H2 AL390729.2-201ENST00000416137 156 ntBASIC4.92□□□□□ -1.62
PCDHGA11Q9Y5H2 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4.92□□□□□ -1.62
PCDHGA11Q9Y5H2 RPL35AP21-201ENST00000437667 333 ntBASIC4.92□□□□□ -1.62
PCDHGA11Q9Y5H2 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.92□□□□□ -1.62
PCDHGA11Q9Y5H2 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC4.92□□□□□ -1.62
PCDHGA11Q9Y5H2 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC4.92□□□□□ -1.62
PCDHGA11Q9Y5H2 AC022795.1-201ENST00000473808 480 ntBASIC4.92□□□□□ -1.62
PCDHGA11Q9Y5H2 MRPL42P6-201ENST00000486397 371 ntBASIC4.92□□□□□ -1.62
PCDHGA11Q9Y5H2 UBE2CP3-201ENST00000502715 450 ntBASIC4.92□□□□□ -1.62
PCDHGA11Q9Y5H2 ATP5LP3-201ENST00000514223 304 ntBASIC4.92□□□□□ -1.62
PCDHGA11Q9Y5H2 BNIP3P1-201ENST00000547295 580 ntBASIC4.92□□□□□ -1.62
PCDHGA11Q9Y5H2 AK6P2-201ENST00000549020 471 ntBASIC4.92□□□□□ -1.62
PCDHGA11Q9Y5H2 AC072026.1-201ENST00000605023 201 ntBASIC4.92□□□□□ -1.62
PCDHGA11Q9Y5H2 AL356157.2-201ENST00000605122 111 ntBASIC4.92□□□□□ -1.62
PCDHGA11Q9Y5H2 AC015914.2-201ENST00000618167 288 ntBASIC4.92□□□□□ -1.62
PCDHGA11Q9Y5H2 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.92□□□□□ -1.62
PCDHGA11Q9Y5H2 AC024581.2-201ENST00000619986 252 ntBASIC4.92□□□□□ -1.62
PCDHGA11Q9Y5H2 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
PCDHGA11Q9Y5H2 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
PCDHGA11Q9Y5H2 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.92□□□□□ -1.62
PCDHGA11Q9Y5H2 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC4.92□□□□□ -1.62
PCDHGA11Q9Y5H2 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
PCDHGA11Q9Y5H2 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.92□□□□□ -1.62
PCDHGA11Q9Y5H2 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.92□□□□□ -1.62
PCDHGA11Q9Y5H2 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
PCDHGA11Q9Y5H2 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.91□□□□□ -1.62
PCDHGA11Q9Y5H2 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
PCDHGA11Q9Y5H2 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.91□□□□□ -1.62
PCDHGA11Q9Y5H2 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.91□□□□□ -1.62
PCDHGA11Q9Y5H2 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.91□□□□□ -1.62
PCDHGA11Q9Y5H2 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
PCDHGA11Q9Y5H2 Y_RNA.122-201ENST00000363331 96 ntBASIC4.91□□□□□ -1.62
PCDHGA11Q9Y5H2 RNY4P28-201ENST00000365281 93 ntBASIC4.91□□□□□ -1.62
PCDHGA11Q9Y5H2 RNU6-514P-201ENST00000384208 107 ntBASIC4.91□□□□□ -1.62
PCDHGA11Q9Y5H2 RNU6-318P-201ENST00000384283 103 ntBASIC4.91□□□□□ -1.62
PCDHGA11Q9Y5H2 Y_RNA.506-201ENST00000384494 102 ntBASIC4.91□□□□□ -1.62
PCDHGA11Q9Y5H2 RNU6-125P-201ENST00000384505 107 ntBASIC4.91□□□□□ -1.62
PCDHGA11Q9Y5H2 RNU6-140P-201ENST00000384566 108 ntBASIC4.91□□□□□ -1.62
PCDHGA11Q9Y5H2 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
PCDHGA11Q9Y5H2 SNORD12B-201ENST00000410433 91 ntBASIC4.91□□□□□ -1.62
PCDHGA11Q9Y5H2 AL606753.1-201ENST00000427435 87 ntBASIC4.91□□□□□ -1.62
PCDHGA11Q9Y5H2 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms