Protein–RNA interactions for Protein: Q9Y5E7

PCDHB2, Protocadherin beta-2, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2Q9Y5E7 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
PCDHB2Q9Y5E7 AC093010.3-201ENST00000570269 15214 ntBASIC3.66□□□□□ -1.82
PCDHB2Q9Y5E7 SRP72P2-201ENST00000344851 1979 ntBASIC3.66□□□□□ -1.82
PCDHB2Q9Y5E7 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
PCDHB2Q9Y5E7 MIR30E-201ENST00000362104 92 ntBASIC3.66□□□□□ -1.82
PCDHB2Q9Y5E7 SNORA62.1-201ENST00000364287 154 ntBASIC3.66□□□□□ -1.82
PCDHB2Q9Y5E7 MIR591-201ENST00000385290 95 ntBASIC3.66□□□□□ -1.82
PCDHB2Q9Y5E7 NDUFS5P1-201ENST00000405668 289 ntBASIC3.66□□□□□ -1.82
PCDHB2Q9Y5E7 RNU6-1068P-201ENST00000410958 103 ntBASIC3.66□□□□□ -1.82
PCDHB2Q9Y5E7 RNU6-387P-201ENST00000411331 105 ntBASIC3.66□□□□□ -1.82
PCDHB2Q9Y5E7 Z99755.1-201ENST00000414048 380 ntBASIC3.66□□□□□ -1.82
PCDHB2Q9Y5E7 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC3.66□□□□□ -1.82
PCDHB2Q9Y5E7 RPL31P12-201ENST00000422587 358 ntBASIC3.66□□□□□ -1.82
PCDHB2Q9Y5E7 HMGB1P12-201ENST00000438594 598 ntBASIC3.66□□□□□ -1.82
PCDHB2Q9Y5E7 MTND4P25-201ENST00000441039 533 ntBASIC3.66□□□□□ -1.82
PCDHB2Q9Y5E7 Z75741.1-201ENST00000446793 314 ntBASIC3.66□□□□□ -1.82
PCDHB2Q9Y5E7 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.66□□□□□ -1.82
PCDHB2Q9Y5E7 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC3.66□□□□□ -1.82
PCDHB2Q9Y5E7 AC006512.1-201ENST00000468816 291 ntBASIC3.66□□□□□ -1.82
PCDHB2Q9Y5E7 VN1R17P-201ENST00000472048 1090 ntBASIC3.66□□□□□ -1.82
PCDHB2Q9Y5E7 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.66□□□□□ -1.82
PCDHB2Q9Y5E7 AC092436.1-201ENST00000506450 503 ntBASIC3.66□□□□□ -1.82
PCDHB2Q9Y5E7 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.66□□□□□ -1.82
PCDHB2Q9Y5E7 RNA5SP401-201ENST00000515920 127 ntBASIC3.66□□□□□ -1.82
PCDHB2Q9Y5E7 RN7SKP258-201ENST00000517151 304 ntBASIC3.66□□□□□ -1.82
PCDHB2Q9Y5E7 AC107934.2-201ENST00000518653 310 ntBASIC3.66□□□□□ -1.82
PCDHB2Q9Y5E7 OR5B19P-201ENST00000531766 928 ntBASIC3.66□□□□□ -1.82
PCDHB2Q9Y5E7 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.66□□□□□ -1.82
PCDHB2Q9Y5E7 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC3.66□□□□□ -1.82
PCDHB2Q9Y5E7 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.66□□□□□ -1.82
PCDHB2Q9Y5E7 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.66□□□□□ -1.82
PCDHB2Q9Y5E7 MED28P6-201ENST00000558776 231 ntBASIC3.66□□□□□ -1.82
PCDHB2Q9Y5E7 MIR4703-201ENST00000577728 79 ntBASIC3.66□□□□□ -1.82
PCDHB2Q9Y5E7 MIR3690-201ENST00000580266 75 ntBASIC3.66□□□□□ -1.82
PCDHB2Q9Y5E7 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.66□□□□□ -1.82
PCDHB2Q9Y5E7 BDH2P1-201ENST00000602288 736 ntBASIC3.66□□□□□ -1.82
PCDHB2Q9Y5E7 AC174048.1-201ENST00000603389 144 ntBASIC3.66□□□□□ -1.82
PCDHB2Q9Y5E7 AP001330.4-201ENST00000604350 154 ntBASIC3.66□□□□□ -1.82
PCDHB2Q9Y5E7 AL162713.1-201ENST00000604480 262 ntBASIC3.66□□□□□ -1.82
PCDHB2Q9Y5E7 AC005000.2-201ENST00000605468 310 ntBASIC3.66□□□□□ -1.82
PCDHB2Q9Y5E7 AC025253.1-201ENST00000613623 543 ntBASIC3.66□□□□□ -1.82
PCDHB2Q9Y5E7 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC3.66□□□□□ -1.82
PCDHB2Q9Y5E7 AC006504.8-201ENST00000621046 635 ntBASIC3.66□□□□□ -1.82
PCDHB2Q9Y5E7 AC011155.2-201ENST00000623202 216 ntBASIC3.66□□□□□ -1.82
PCDHB2Q9Y5E7 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
PCDHB2Q9Y5E7 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.66□□□□□ -1.82
PCDHB2Q9Y5E7 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
PCDHB2Q9Y5E7 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.66□□□□□ -1.82
PCDHB2Q9Y5E7 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
PCDHB2Q9Y5E7 SNORA72.1-201ENST00000363485 129 ntBASIC3.65□□□□□ -1.83
PCDHB2Q9Y5E7 SNORD115-7-201ENST00000365306 82 ntBASIC3.65□□□□□ -1.83
PCDHB2Q9Y5E7 RNU2-71P-201ENST00000411395 189 ntBASIC3.65□□□□□ -1.83
PCDHB2Q9Y5E7 AC114491.1-201ENST00000416095 246 ntBASIC3.65□□□□□ -1.83
PCDHB2Q9Y5E7 SRIP2-201ENST00000428470 166 ntBASIC3.65□□□□□ -1.83
PCDHB2Q9Y5E7 RPL36AP53-201ENST00000432891 316 ntBASIC3.65□□□□□ -1.83
PCDHB2Q9Y5E7 VDAC1P3-201ENST00000434069 851 ntBASIC3.65□□□□□ -1.83
PCDHB2Q9Y5E7 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
PCDHB2Q9Y5E7 AC008264.1-201ENST00000447612 367 ntBASIC3.65□□□□□ -1.83
PCDHB2Q9Y5E7 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.65□□□□□ -1.83
PCDHB2Q9Y5E7 RPS4XP13-201ENST00000483219 789 ntBASIC3.65□□□□□ -1.83
PCDHB2Q9Y5E7 RN7SL504P-201ENST00000494496 287 ntBASIC3.65□□□□□ -1.83
PCDHB2Q9Y5E7 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC3.65□□□□□ -1.83
PCDHB2Q9Y5E7 APOOP4-201ENST00000513530 597 ntBASIC3.65□□□□□ -1.83
PCDHB2Q9Y5E7 SUB1P1-201ENST00000524415 382 ntBASIC3.65□□□□□ -1.83
PCDHB2Q9Y5E7 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC3.65□□□□□ -1.83
PCDHB2Q9Y5E7 HIF1AP1-201ENST00000553642 175 ntBASIC3.65□□□□□ -1.83
PCDHB2Q9Y5E7 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC3.65□□□□□ -1.83
PCDHB2Q9Y5E7 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.65□□□□□ -1.83
PCDHB2Q9Y5E7 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.65□□□□□ -1.83
PCDHB2Q9Y5E7 AC005951.2-201ENST00000576282 495 ntBASIC3.65□□□□□ -1.83
PCDHB2Q9Y5E7 AC015917.1-201ENST00000579654 510 ntBASIC3.65□□□□□ -1.83
PCDHB2Q9Y5E7 AC012493.2-201ENST00000595083 291 ntBASIC3.65□□□□□ -1.83
PCDHB2Q9Y5E7 AC007998.5-201ENST00000622938 237 ntBASIC3.65□□□□□ -1.83
PCDHB2Q9Y5E7 AC025034.2-201ENST00000623264 286 ntBASIC3.65□□□□□ -1.83
PCDHB2Q9Y5E7 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
PCDHB2Q9Y5E7 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
PCDHB2Q9Y5E7 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
PCDHB2Q9Y5E7 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
PCDHB2Q9Y5E7 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
PCDHB2Q9Y5E7 AC017071.1-201ENST00000564407 2204 ntBASIC3.64□□□□□ -1.83
PCDHB2Q9Y5E7 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
PCDHB2Q9Y5E7 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.64□□□□□ -1.83
PCDHB2Q9Y5E7 DEFB108F-201ENST00000344638 222 ntBASIC3.64□□□□□ -1.83
PCDHB2Q9Y5E7 Y_RNA.157-201ENST00000363638 102 ntBASIC3.64□□□□□ -1.83
PCDHB2Q9Y5E7 RNU6-946P-201ENST00000383878 107 ntBASIC3.64□□□□□ -1.83
PCDHB2Q9Y5E7 RNU6-701P-201ENST00000384059 107 ntBASIC3.64□□□□□ -1.83
PCDHB2Q9Y5E7 RNU6-1029P-201ENST00000384109 107 ntBASIC3.64□□□□□ -1.83
PCDHB2Q9Y5E7 RNU6-14P-201ENST00000384630 106 ntBASIC3.64□□□□□ -1.83
PCDHB2Q9Y5E7 RNU6-903P-201ENST00000391270 109 ntBASIC3.64□□□□□ -1.83
PCDHB2Q9Y5E7 RNU2-29P-201ENST00000410423 189 ntBASIC3.64□□□□□ -1.83
PCDHB2Q9Y5E7 RNU6-193P-201ENST00000410977 107 ntBASIC3.64□□□□□ -1.83
PCDHB2Q9Y5E7 RNU6-373P-201ENST00000411247 98 ntBASIC3.64□□□□□ -1.83
PCDHB2Q9Y5E7 Z92545.1-201ENST00000411782 234 ntBASIC3.64□□□□□ -1.83
PCDHB2Q9Y5E7 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.64□□□□□ -1.83
PCDHB2Q9Y5E7 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
PCDHB2Q9Y5E7 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC3.64□□□□□ -1.83
PCDHB2Q9Y5E7 MTCYBP8-201ENST00000422855 651 ntBASIC3.64□□□□□ -1.83
PCDHB2Q9Y5E7 RPL23AP82-202ENST00000427528 469 ntBASIC3.64□□□□□ -1.83
PCDHB2Q9Y5E7 AC008850.1-201ENST00000427546 362 ntBASIC3.64□□□□□ -1.83
PCDHB2Q9Y5E7 AC093106.2-201ENST00000428212 385 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms