Protein–RNA interactions for Protein: Q9UIS9

MBD1, Methyl-CpG-binding domain protein 1, humanhuman

Predicted RBP Predictions only

Length 605 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1Q9UIS9 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.33□□□□□ -1.72
MBD1Q9UIS9 HMGB1P35-201ENST00000503360 598 ntBASIC4.33□□□□□ -1.72
MBD1Q9UIS9 MTCO3P44-201ENST00000510977 541 ntBASIC4.33□□□□□ -1.72
MBD1Q9UIS9 Y_RNA.689-201ENST00000516589 107 ntBASIC4.33□□□□□ -1.72
MBD1Q9UIS9 IGKV2D-23-201ENST00000518179 286 ntBASIC4.33□□□□□ -1.72
MBD1Q9UIS9 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC4.33□□□□□ -1.72
MBD1Q9UIS9 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.33□□□□□ -1.72
MBD1Q9UIS9 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
MBD1Q9UIS9 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC4.33□□□□□ -1.72
MBD1Q9UIS9 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
MBD1Q9UIS9 AC140113.4-201ENST00000622087 222 ntBASIC4.33□□□□□ -1.72
MBD1Q9UIS9 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
MBD1Q9UIS9 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.33□□□□□ -1.72
MBD1Q9UIS9 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.33□□□□□ -1.72
MBD1Q9UIS9 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
MBD1Q9UIS9 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
MBD1Q9UIS9 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
MBD1Q9UIS9 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
MBD1Q9UIS9 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
MBD1Q9UIS9 RNU1-14P-201ENST00000362759 152 ntBASIC4.32□□□□□ -1.72
MBD1Q9UIS9 RNA5SP307-201ENST00000362863 116 ntBASIC4.32□□□□□ -1.72
MBD1Q9UIS9 AL445529.1-201ENST00000398713 389 ntBASIC4.32□□□□□ -1.72
MBD1Q9UIS9 RPS23P10-201ENST00000416185 486 ntBASIC4.32□□□□□ -1.72
MBD1Q9UIS9 SYF2P2-201ENST00000417620 583 ntBASIC4.32□□□□□ -1.72
MBD1Q9UIS9 BX276092.3-201ENST00000424182 230 ntBASIC4.32□□□□□ -1.72
MBD1Q9UIS9 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC4.32□□□□□ -1.72
MBD1Q9UIS9 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.32□□□□□ -1.72
MBD1Q9UIS9 RPS29P7-201ENST00000439662 171 ntBASIC4.32□□□□□ -1.72
MBD1Q9UIS9 RPL23AP33-201ENST00000442301 452 ntBASIC4.32□□□□□ -1.72
MBD1Q9UIS9 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.32□□□□□ -1.72
MBD1Q9UIS9 AL162389.1-201ENST00000449233 177 ntBASIC4.32□□□□□ -1.72
MBD1Q9UIS9 RNU7-138P-201ENST00000459479 64 ntBASIC4.32□□□□□ -1.72
MBD1Q9UIS9 RPL35AP15-201ENST00000468042 339 ntBASIC4.32□□□□□ -1.72
MBD1Q9UIS9 AP000926.1-201ENST00000479573 241 ntBASIC4.32□□□□□ -1.72
MBD1Q9UIS9 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.32□□□□□ -1.72
MBD1Q9UIS9 SNORA40.15-201ENST00000516884 107 ntBASIC4.32□□□□□ -1.72
MBD1Q9UIS9 RNU6-111P-201ENST00000517179 105 ntBASIC4.32□□□□□ -1.72
MBD1Q9UIS9 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC4.32□□□□□ -1.72
MBD1Q9UIS9 RPL23AP97-201ENST00000568955 471 ntBASIC4.32□□□□□ -1.72
MBD1Q9UIS9 RN7SL703P-201ENST00000578485 302 ntBASIC4.32□□□□□ -1.72
MBD1Q9UIS9 AC174048.1-201ENST00000603389 144 ntBASIC4.32□□□□□ -1.72
MBD1Q9UIS9 AC007566.2-201ENST00000603642 413 ntBASIC4.32□□□□□ -1.72
MBD1Q9UIS9 AL031176.1-201ENST00000604554 466 ntBASIC4.32□□□□□ -1.72
MBD1Q9UIS9 ELOCP5-201ENST00000604924 333 ntBASIC4.32□□□□□ -1.72
MBD1Q9UIS9 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
MBD1Q9UIS9 AC007546.2-201ENST00000623996 360 ntBASIC4.32□□□□□ -1.72
MBD1Q9UIS9 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.32□□□□□ -1.72
MBD1Q9UIS9 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.32□□□□□ -1.72
MBD1Q9UIS9 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
MBD1Q9UIS9 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
MBD1Q9UIS9 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
MBD1Q9UIS9 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
MBD1Q9UIS9 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
MBD1Q9UIS9 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.32□□□□□ -1.72
MBD1Q9UIS9 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
MBD1Q9UIS9 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
MBD1Q9UIS9 RLIMP1-201ENST00000339626 1680 ntBASIC4.32□□□□□ -1.72
MBD1Q9UIS9 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.32□□□□□ -1.72
MBD1Q9UIS9 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
MBD1Q9UIS9 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.31□□□□□ -1.72
MBD1Q9UIS9 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.31□□□□□ -1.72
MBD1Q9UIS9 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
MBD1Q9UIS9 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.31□□□□□ -1.72
MBD1Q9UIS9 AC027290.2-201ENST00000623210 18662 ntBASIC4.31□□□□□ -1.72
MBD1Q9UIS9 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
MBD1Q9UIS9 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
MBD1Q9UIS9 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4.31□□□□□ -1.72
MBD1Q9UIS9 Y_RNA.19-201ENST00000362462 99 ntBASIC4.31□□□□□ -1.72
MBD1Q9UIS9 SNORA71.3-201ENST00000362582 128 ntBASIC4.31□□□□□ -1.72
MBD1Q9UIS9 RNU1-20P-201ENST00000363314 162 ntBASIC4.31□□□□□ -1.72
MBD1Q9UIS9 RNU6-770P-201ENST00000363929 105 ntBASIC4.31□□□□□ -1.72
MBD1Q9UIS9 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC4.31□□□□□ -1.72
MBD1Q9UIS9 RNU6-190P-201ENST00000384154 102 ntBASIC4.31□□□□□ -1.72
MBD1Q9UIS9 RPL21P65-201ENST00000406094 466 ntBASIC4.31□□□□□ -1.72
MBD1Q9UIS9 RNA5SP239-201ENST00000410218 129 ntBASIC4.31□□□□□ -1.72
MBD1Q9UIS9 AC092809.3-201ENST00000415453 231 ntBASIC4.31□□□□□ -1.72
MBD1Q9UIS9 AL133396.1-201ENST00000432048 687 ntBASIC4.31□□□□□ -1.72
MBD1Q9UIS9 AL353997.1-201ENST00000432936 108 ntBASIC4.31□□□□□ -1.72
MBD1Q9UIS9 CEACAMP1-201ENST00000434624 1035 ntBASIC4.31□□□□□ -1.72
MBD1Q9UIS9 RPL23AP31-201ENST00000456160 467 ntBASIC4.31□□□□□ -1.72
MBD1Q9UIS9 RN7SL812P-201ENST00000493791 279 ntBASIC4.31□□□□□ -1.72
MBD1Q9UIS9 AC146944.2-203ENST00000502493 354 ntBASIC4.31□□□□□ -1.72
MBD1Q9UIS9 AC139495.1-202ENST00000513164 354 ntBASIC4.31□□□□□ -1.72
MBD1Q9UIS9 AC099522.1-202ENST00000514718 367 ntBASIC4.31□□□□□ -1.72
MBD1Q9UIS9 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC4.31□□□□□ -1.72
MBD1Q9UIS9 AC022080.3-201ENST00000544433 482 ntBASIC4.31□□□□□ -1.72
MBD1Q9UIS9 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.31□□□□□ -1.72
MBD1Q9UIS9 SARNP-203ENST00000552080 726 ntTSL 2 BASIC4.31□□□□□ -1.72
MBD1Q9UIS9 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC4.31□□□□□ -1.72
MBD1Q9UIS9 AC006600.1-201ENST00000572529 153 ntBASIC4.31□□□□□ -1.72
MBD1Q9UIS9 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC4.31□□□□□ -1.72
MBD1Q9UIS9 AC002044.1-201ENST00000606707 158 ntBASIC4.31□□□□□ -1.72
MBD1Q9UIS9 SNORD91B-202ENST00000608459 222 ntBASIC4.31□□□□□ -1.72
MBD1Q9UIS9 FAM27D1-201ENST00000612308 341 ntBASIC4.31□□□□□ -1.72
MBD1Q9UIS9 AL021997.2-201ENST00000615674 271 ntBASIC4.31□□□□□ -1.72
MBD1Q9UIS9 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
MBD1Q9UIS9 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
MBD1Q9UIS9 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
MBD1Q9UIS9 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.31□□□□□ -1.72
MBD1Q9UIS9 DDX10P1-201ENST00000448545 1933 ntBASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 135.2 ms