Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 AC022493.1-201ENST00000492984 337 ntBASIC3.46□□□□□ -1.86
LRFN1Q9P244 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC3.46□□□□□ -1.86
LRFN1Q9P244 AC009901.1-201ENST00000506703 541 ntBASIC3.46□□□□□ -1.86
LRFN1Q9P244 AC114786.4-201ENST00000508771 728 ntBASIC3.46□□□□□ -1.86
LRFN1Q9P244 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.46□□□□□ -1.86
LRFN1Q9P244 SNORA74D-201ENST00000516404 141 ntBASIC3.46□□□□□ -1.86
LRFN1Q9P244 Y_RNA.704-201ENST00000516851 102 ntBASIC3.46□□□□□ -1.86
LRFN1Q9P244 NARSP2-201ENST00000518524 679 ntBASIC3.46□□□□□ -1.86
LRFN1Q9P244 HIF1AP1-201ENST00000553642 175 ntBASIC3.46□□□□□ -1.86
LRFN1Q9P244 AL133241.1-201ENST00000556832 487 ntBASIC3.46□□□□□ -1.86
LRFN1Q9P244 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC3.46□□□□□ -1.86
LRFN1Q9P244 AL162413.1-201ENST00000603198 110 ntBASIC3.46□□□□□ -1.86
LRFN1Q9P244 AP003122.6-201ENST00000623831 495 ntBASIC3.46□□□□□ -1.86
LRFN1Q9P244 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.46□□□□□ -1.86
LRFN1Q9P244 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.46□□□□□ -1.86
LRFN1Q9P244 IPO8P1-201ENST00000455509 3109 ntBASIC3.46□□□□□ -1.86
LRFN1Q9P244 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
LRFN1Q9P244 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
LRFN1Q9P244 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.45□□□□□ -1.86
LRFN1Q9P244 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
LRFN1Q9P244 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.45□□□□□ -1.86
LRFN1Q9P244 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC3.45□□□□□ -1.86
LRFN1Q9P244 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
LRFN1Q9P244 Y_RNA.573-201ENST00000384763 105 ntBASIC3.45□□□□□ -1.86
LRFN1Q9P244 SNORD115-47-201ENST00000391226 86 ntBASIC3.45□□□□□ -1.86
LRFN1Q9P244 SNORA40C-201ENST00000391285 128 ntBASIC3.45□□□□□ -1.86
LRFN1Q9P244 RNU6-908P-201ENST00000410160 94 ntBASIC3.45□□□□□ -1.86
LRFN1Q9P244 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC3.45□□□□□ -1.86
LRFN1Q9P244 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC3.45□□□□□ -1.86
LRFN1Q9P244 HMGN2P31-201ENST00000432430 273 ntBASIC3.45□□□□□ -1.86
LRFN1Q9P244 RBMX2P4-201ENST00000441256 376 ntBASIC3.45□□□□□ -1.86
LRFN1Q9P244 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC3.45□□□□□ -1.86
LRFN1Q9P244 AL360271.2-201ENST00000447710 161 ntBASIC3.45□□□□□ -1.86
LRFN1Q9P244 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.45□□□□□ -1.86
LRFN1Q9P244 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC3.45□□□□□ -1.86
LRFN1Q9P244 AL136097.1-201ENST00000456945 913 ntBASIC3.45□□□□□ -1.86
LRFN1Q9P244 SNRPFP3-201ENST00000457792 225 ntBASIC3.45□□□□□ -1.86
LRFN1Q9P244 RNU7-180P-201ENST00000459240 63 ntBASIC3.45□□□□□ -1.86
LRFN1Q9P244 RPL21P13-201ENST00000488305 481 ntBASIC3.45□□□□□ -1.86
LRFN1Q9P244 AC069499.1-201ENST00000489433 509 ntBASIC3.45□□□□□ -1.86
LRFN1Q9P244 RPS27AP10-201ENST00000496103 208 ntBASIC3.45□□□□□ -1.86
LRFN1Q9P244 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC3.45□□□□□ -1.86
LRFN1Q9P244 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
LRFN1Q9P244 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC3.45□□□□□ -1.86
LRFN1Q9P244 RN7SKP18-201ENST00000516005 275 ntBASIC3.45□□□□□ -1.86
LRFN1Q9P244 RNU6-1178P-201ENST00000516674 107 ntBASIC3.45□□□□□ -1.86
LRFN1Q9P244 AC025755.1-201ENST00000521306 278 ntBASIC3.45□□□□□ -1.86
LRFN1Q9P244 AC007991.1-201ENST00000522680 631 ntBASIC3.45□□□□□ -1.86
LRFN1Q9P244 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC3.45□□□□□ -1.86
LRFN1Q9P244 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC3.45□□□□□ -1.86
LRFN1Q9P244 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
LRFN1Q9P244 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.45□□□□□ -1.86
LRFN1Q9P244 AC234778.2-201ENST00000566241 354 ntBASIC3.45□□□□□ -1.86
LRFN1Q9P244 MIR3200-201ENST00000580767 85 ntBASIC3.45□□□□□ -1.86
LRFN1Q9P244 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.45□□□□□ -1.86
LRFN1Q9P244 AC004852.3-201ENST00000614131 326 ntBASIC3.45□□□□□ -1.86
LRFN1Q9P244 AL161629.2-201ENST00000615347 275 ntBASIC3.45□□□□□ -1.86
LRFN1Q9P244 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.45□□□□□ -1.86
LRFN1Q9P244 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC3.45□□□□□ -1.86
LRFN1Q9P244 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
LRFN1Q9P244 MTND4P14-201ENST00000435799 1354 ntBASIC3.45□□□□□ -1.86
LRFN1Q9P244 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
LRFN1Q9P244 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.45□□□□□ -1.86
LRFN1Q9P244 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.45□□□□□ -1.86
LRFN1Q9P244 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
LRFN1Q9P244 MAPK10-266ENST00000641066 6555 ntBASIC3.45□□□□□ -1.86
LRFN1Q9P244 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
LRFN1Q9P244 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
LRFN1Q9P244 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
LRFN1Q9P244 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.44□□□□□ -1.86
LRFN1Q9P244 MIR578-201ENST00000384828 96 ntBASIC3.44□□□□□ -1.86
LRFN1Q9P244 MIR34B-201ENST00000385076 84 ntBASIC3.44□□□□□ -1.86
LRFN1Q9P244 RNU1-101P-201ENST00000391171 127 ntBASIC3.44□□□□□ -1.86
LRFN1Q9P244 AL139039.1-201ENST00000401900 692 ntBASIC3.44□□□□□ -1.86
LRFN1Q9P244 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
LRFN1Q9P244 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.44□□□□□ -1.86
LRFN1Q9P244 AL353729.1-201ENST00000425044 720 ntBASIC3.44□□□□□ -1.86
LRFN1Q9P244 AL365496.1-201ENST00000426885 215 ntBASIC3.44□□□□□ -1.86
LRFN1Q9P244 ARF4P2-201ENST00000430209 526 ntBASIC3.44□□□□□ -1.86
LRFN1Q9P244 AC087650.1-201ENST00000431445 468 ntBASIC3.44□□□□□ -1.86
LRFN1Q9P244 AC000111.3-201ENST00000433478 193 ntBASIC3.44□□□□□ -1.86
LRFN1Q9P244 SEPT14P3-201ENST00000439401 183 ntBASIC3.44□□□□□ -1.86
LRFN1Q9P244 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.44□□□□□ -1.86
LRFN1Q9P244 AL732372.2-207ENST00000445840 183 ntBASIC3.44□□□□□ -1.86
LRFN1Q9P244 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC3.44□□□□□ -1.86
LRFN1Q9P244 SEPT14P2-201ENST00000453405 183 ntBASIC3.44□□□□□ -1.86
LRFN1Q9P244 MTCO3P38-201ENST00000468910 766 ntBASIC3.44□□□□□ -1.86
LRFN1Q9P244 MTAPP1-201ENST00000489154 819 ntBASIC3.44□□□□□ -1.86
LRFN1Q9P244 RPS29P20-201ENST00000489592 171 ntBASIC3.44□□□□□ -1.86
LRFN1Q9P244 MTCO3P9-201ENST00000506989 781 ntBASIC3.44□□□□□ -1.86
LRFN1Q9P244 AC104619.4-201ENST00000510773 249 ntBASIC3.44□□□□□ -1.86
LRFN1Q9P244 RAC1P2-201ENST00000511164 579 ntBASIC3.44□□□□□ -1.86
LRFN1Q9P244 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.44□□□□□ -1.86
LRFN1Q9P244 AC104136.1-201ENST00000512969 394 ntBASIC3.44□□□□□ -1.86
LRFN1Q9P244 SEPT14P4-201ENST00000513445 186 ntBASIC3.44□□□□□ -1.86
LRFN1Q9P244 AC112206.3-201ENST00000514578 389 ntBASIC3.44□□□□□ -1.86
LRFN1Q9P244 LRRC34P2-201ENST00000514850 553 ntBASIC3.44□□□□□ -1.86
LRFN1Q9P244 SUMO2P20-201ENST00000520803 283 ntBASIC3.44□□□□□ -1.86
LRFN1Q9P244 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.44□□□□□ -1.86
LRFN1Q9P244 FO082796.1-201ENST00000523795 183 ntBASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms