Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.89□□□□□ -1.63
CNTN3Q9P232 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CNTN3Q9P232 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
CNTN3Q9P232 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.89□□□□□ -1.63
CNTN3Q9P232 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.89□□□□□ -1.63
CNTN3Q9P232 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
CNTN3Q9P232 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CNTN3Q9P232 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.88□□□□□ -1.63
CNTN3Q9P232 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.88□□□□□ -1.63
CNTN3Q9P232 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CNTN3Q9P232 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.88□□□□□ -1.63
CNTN3Q9P232 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.88□□□□□ -1.63
CNTN3Q9P232 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC4.88□□□□□ -1.63
CNTN3Q9P232 AC007685.1-201ENST00000329806 452 ntBASIC4.88□□□□□ -1.63
CNTN3Q9P232 RNU6-37P-201ENST00000362692 107 ntBASIC4.88□□□□□ -1.63
CNTN3Q9P232 RNU6-11P-201ENST00000364234 107 ntBASIC4.88□□□□□ -1.63
CNTN3Q9P232 RNU6-7-201ENST00000364784 107 ntBASIC4.88□□□□□ -1.63
CNTN3Q9P232 RNU6-8-201ENST00000365467 107 ntBASIC4.88□□□□□ -1.63
CNTN3Q9P232 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CNTN3Q9P232 RNU6-25P-201ENST00000383873 107 ntBASIC4.88□□□□□ -1.63
CNTN3Q9P232 RNU6-1-201ENST00000383898 107 ntBASIC4.88□□□□□ -1.63
CNTN3Q9P232 RNU6-48P-201ENST00000384161 107 ntBASIC4.88□□□□□ -1.63
CNTN3Q9P232 RNU6-36P-201ENST00000384172 107 ntBASIC4.88□□□□□ -1.63
CNTN3Q9P232 RNU6-4P-201ENST00000384205 107 ntBASIC4.88□□□□□ -1.63
CNTN3Q9P232 RNU6-5P-201ENST00000384238 107 ntBASIC4.88□□□□□ -1.63
CNTN3Q9P232 RNU6-3P-201ENST00000384314 107 ntBASIC4.88□□□□□ -1.63
CNTN3Q9P232 RNU6-16P-201ENST00000384385 107 ntBASIC4.88□□□□□ -1.63
CNTN3Q9P232 RNU6-15P-201ENST00000384534 107 ntBASIC4.88□□□□□ -1.63
CNTN3Q9P232 RNU6-2-201ENST00000384627 107 ntBASIC4.88□□□□□ -1.63
CNTN3Q9P232 RNU6-29P-201ENST00000384637 107 ntBASIC4.88□□□□□ -1.63
CNTN3Q9P232 RNU6-9-201ENST00000384776 107 ntBASIC4.88□□□□□ -1.63
CNTN3Q9P232 RNU6-33P-201ENST00000384793 107 ntBASIC4.88□□□□□ -1.63
CNTN3Q9P232 MIR514A1-201ENST00000385133 98 ntBASIC4.88□□□□□ -1.63
CNTN3Q9P232 SNORD96B-201ENST00000386148 79 ntBASIC4.88□□□□□ -1.63
CNTN3Q9P232 SNORD56-201ENST00000413522 71 ntBASIC4.88□□□□□ -1.63
CNTN3Q9P232 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC4.88□□□□□ -1.63
CNTN3Q9P232 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.88□□□□□ -1.63
CNTN3Q9P232 AL590135.1-201ENST00000422215 156 ntBASIC4.88□□□□□ -1.63
CNTN3Q9P232 Z74021.1-201ENST00000423610 407 ntBASIC4.88□□□□□ -1.63
CNTN3Q9P232 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC4.88□□□□□ -1.63
CNTN3Q9P232 AL159987.2-201ENST00000432754 307 ntBASIC4.88□□□□□ -1.63
CNTN3Q9P232 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.88□□□□□ -1.63
CNTN3Q9P232 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC4.88□□□□□ -1.63
CNTN3Q9P232 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.88□□□□□ -1.63
CNTN3Q9P232 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CNTN3Q9P232 HMGB1P35-201ENST00000503360 598 ntBASIC4.88□□□□□ -1.63
CNTN3Q9P232 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.88□□□□□ -1.63
CNTN3Q9P232 AC008958.1-201ENST00000511047 682 ntBASIC4.88□□□□□ -1.63
CNTN3Q9P232 AC023141.12-201ENST00000512399 199 ntBASIC4.88□□□□□ -1.63
CNTN3Q9P232 Y_RNA.673-201ENST00000516306 88 ntBASIC4.88□□□□□ -1.63
CNTN3Q9P232 RNU6-182P-201ENST00000516970 105 ntBASIC4.88□□□□□ -1.63
CNTN3Q9P232 RNU6-570P-201ENST00000517051 105 ntBASIC4.88□□□□□ -1.63
CNTN3Q9P232 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.88□□□□□ -1.63
CNTN3Q9P232 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.88□□□□□ -1.63
CNTN3Q9P232 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CNTN3Q9P232 AC009314.1-201ENST00000603871 304 ntBASIC4.88□□□□□ -1.63
CNTN3Q9P232 RNU6-6P-201ENST00000606623 107 ntBASIC4.88□□□□□ -1.63
CNTN3Q9P232 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CNTN3Q9P232 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC4.88□□□□□ -1.63
CNTN3Q9P232 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.88□□□□□ -1.63
CNTN3Q9P232 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CNTN3Q9P232 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.88□□□□□ -1.63
CNTN3Q9P232 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.88□□□□□ -1.63
CNTN3Q9P232 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.88□□□□□ -1.63
CNTN3Q9P232 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CNTN3Q9P232 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
CNTN3Q9P232 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
CNTN3Q9P232 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
CNTN3Q9P232 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
CNTN3Q9P232 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CNTN3Q9P232 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CNTN3Q9P232 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CNTN3Q9P232 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.87□□□□□ -1.63
CNTN3Q9P232 Y_RNA.20-201ENST00000362479 113 ntBASIC4.87□□□□□ -1.63
CNTN3Q9P232 Y_RNA.785-201ENST00000384290 109 ntBASIC4.87□□□□□ -1.63
CNTN3Q9P232 MTCYBP2-201ENST00000407745 171 ntBASIC4.87□□□□□ -1.63
CNTN3Q9P232 TMSB10P2-201ENST00000416049 131 ntBASIC4.87□□□□□ -1.63
CNTN3Q9P232 RPS12P10-201ENST00000427031 377 ntBASIC4.87□□□□□ -1.63
CNTN3Q9P232 TOMM20P4-201ENST00000427861 435 ntBASIC4.87□□□□□ -1.63
CNTN3Q9P232 C4BPAP2-201ENST00000428434 478 ntBASIC4.87□□□□□ -1.63
CNTN3Q9P232 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.87□□□□□ -1.63
CNTN3Q9P232 RPL23AP24-201ENST00000458203 385 ntBASIC4.87□□□□□ -1.63
CNTN3Q9P232 RPL21P13-201ENST00000488305 481 ntBASIC4.87□□□□□ -1.63
CNTN3Q9P232 AC110792.1-201ENST00000491826 472 ntBASIC4.87□□□□□ -1.63
CNTN3Q9P232 MLLT10P2-201ENST00000506434 249 ntBASIC4.87□□□□□ -1.63
CNTN3Q9P232 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC4.87□□□□□ -1.63
CNTN3Q9P232 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC4.87□□□□□ -1.63
CNTN3Q9P232 AC109479.2-201ENST00000517842 174 ntBASIC4.87□□□□□ -1.63
CNTN3Q9P232 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC4.87□□□□□ -1.63
CNTN3Q9P232 UTP23-205ENST00000520733 369 ntTSL 3 BASIC4.87□□□□□ -1.63
CNTN3Q9P232 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.87□□□□□ -1.63
CNTN3Q9P232 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.87□□□□□ -1.63
CNTN3Q9P232 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC4.87□□□□□ -1.63
CNTN3Q9P232 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC4.87□□□□□ -1.63
CNTN3Q9P232 AMZ2P1-203ENST00000565833 850 ntBASIC4.87□□□□□ -1.63
CNTN3Q9P232 BPIFA4P-203ENST00000603168 689 ntBASIC4.87□□□□□ -1.63
CNTN3Q9P232 MIR6798-201ENST00000612887 67 ntBASIC4.87□□□□□ -1.63
CNTN3Q9P232 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC4.87□□□□□ -1.63
CNTN3Q9P232 AC005086.4-201ENST00000623065 213 ntBASIC4.87□□□□□ -1.63
CNTN3Q9P232 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 182.3 ms